Bug 546534 – dev-python/statsmodels-0.6.1 fails tests with python3.3

• Product: Gentoo Linux
• Status: RESOLVED OBSOLETE

[Description Patrick Lauer 2015-04-14 07:33:14 UTC]

======================================================================
FAIL: statsmodels.discrete.tests.test_discrete.test_perfect_prediction
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib64/python3.3/site-packages/nose/case.py", line 198, in runTest
    self.test(*self.arg)
  File "/var/tmp/portage/dev-python/statsmodels-0.6.1/work/statsmodels-0.6.1-python3_3/lib/statsmodels/discrete/tests/test_discrete.py", line 1290, in test_perfect_prediction
    mod.fit(disp=False, maxiter=50)  # should not raise but does warn
  File "/usr/lib64/python3.3/contextlib.py", line 55, in __exit__
    next(self.gen)
  File "/usr/lib64/python3.3/site-packages/pandas/util/testing.py", line 1716, in assert_produces_warning
    % expected_warning.__name__)
AssertionError: Did not see expected warning of class 'Warning'.

======================================================================
FAIL: statsmodels.discrete.tests.test_discrete.test_poisson_newton
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib64/python3.3/site-packages/nose/case.py", line 198, in runTest
    self.test(*self.arg)
  File "/var/tmp/portage/dev-python/statsmodels-0.6.1/work/statsmodels-0.6.1-python3_3/lib/statsmodels/discrete/tests/test_discrete.py", line 1319, in test_poisson_newton
    res = mod.fit(start_params=-np.ones(4), method='newton', disp=0)
  File "/usr/lib64/python3.3/contextlib.py", line 55, in __exit__
    next(self.gen)
  File "/usr/lib64/python3.3/site-packages/pandas/util/testing.py", line 1716, in assert_produces_warning
    % expected_warning.__name__)
AssertionError: Did not see expected warning of class 'Warning'.

----------------------------------------------------------------------
Ran 3306 tests in 454.466s

FAILED (SKIP=25, failures=2)
 * ERROR: dev-python/statsmodels-0.6.1::gentoo failed (test phase):
 *   virtualmake: the nosetests failed.

Portage 2.2.18 (python 3.3.5-final-0, default/linux/amd64/13.0/desktop/kde, gcc-4.9.2, glibc-2.20-r2, 3.19.3-gentoo x86_64)
=================================================================
System uname: Linux-3.19.3-gentoo-x86_64-AMD_Phenom-tm-_II_X4_965_Processor-with-gentoo-2.2
KiB Mem:     7918968 total,   2952084 free
KiB Swap:   16777208 total,  16758924 free
sh bash 4.3_p33-r2
ld GNU ld (Gentoo 2.25 p1.0) 2.25
app-shells/bash:          4.3_p33-r2::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.9-r2::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo
dev-util/cmake:           3.2.1::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.13.11::gentoo
sys-apps/sandbox:         2.6-r1::gentoo
sys-devel/autoconf:       2.69-r1::gentoo
sys-devel/automake:       1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25::gentoo
sys-devel/gcc:            4.9.2::gentoo
sys-devel/gcc-config:     1.8::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 3.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.20-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

x-overlay
    location: /overlay
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms split-elog strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirrors.sohu.com/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit cracklib crypt cups cxx dbus declarative dri dts dvd dvdr egl emboss encode exif fam firefox flac fortran gdbm gif glamor gpm gtk iconv ipv6 jpeg kde kipi lcms ldap libav libnotify mad mmx mmxext mng modules mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds python qt3support qt4 readline sdl semantic-desktop session spell sqlite sse sse2 ssl startup-notification svg tcl tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xa xcb xcomposite xinerama xml xscreensaver xv xvfb xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3 python3_4 pypy pypy3" RUBY_TARGETS="ruby21 ruby22" USERLAND="GNU" VIDEO_CARDS="vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Michał Górny 2020-03-29 09:53:07 UTC]

Old version removed.  Please reopen if you can still reproduce.