Bug 530218 – app-accessibility/at-spi2-core-2.12.0-r1 with app-emulation/emul-linux-x86-gtklibs-20140508-r3 - file collision in usr/lib32/libatspi.so.0.0.1 /usr/lib32/pkgconfig/atspi-2.pc /usr/lib32/libatspi.so.0 /usr/lib32/libatspi.so

• Product: Gentoo Linux
• Status: RESOLVED FIXED

[Description N. Andrew Walsh 2014-11-23 19:09:29 UTC]

At the end of emerging app-emulation/emul-linux-x86-gtklibs-20140508-r3 I get the following:

 Detected file collision(s):
 * 
 *      /usr/lib32/libatspi.so.0.0.1
 *      /usr/lib32/pkgconfig/atspi-2.pc
 *      /usr/lib32/libatspi.so.0
 *      /usr/lib32/libatspi.so
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * app-emulation/emul-linux-x86-gtklibs-20140508-r3:0::gentoo
 *      /usr/lib32/libatspi.so
 *      /usr/lib32/libatspi.so.0
 *      /usr/lib32/libatspi.so.0.0.1
 *      /usr/lib32/pkgconfig/atspi-2.pc

And emerge stops at that point. Is at-spi2-core intended to replace emul-linux-x86-gtklibs, or was this an oversight?

Reproducible: Always

Steps to Reproduce:
1. emerge emul-linux-x86-gtklibs
2. emerge at-spi2-core-2.12.0-r1
3. fail
Actual Results:  
see above

Expected Results:  
both packages can coexist on my system peacefully.

emerge --info:

Portage 2.2.14 (python 2.7.8-final-0, default/linux/amd64/13.0, gcc-4.8.3, glibc-2.20, 3.17.4-gentoo x86_64)
=================================================================
System uname: Linux-3.17.4-gentoo-x86_64-AMD_Phenom-tm-_9950_Quad-Core_Processor-with-gentoo-2.2
KiB Mem:     4057620 total,    199480 free
KiB Swap:    2929668 total,   2500928 free
Timestamp of tree: Sun, 23 Nov 2014 11:15:01 +0000
ld GNU ld (GNU Binutils) 2.24
ccache version 3.2 [disabled]
app-shells/bash:          4.3_p30-r1
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r2
dev-lang/python:          2.7.8, 3.2.5-r3, 3.3.5-r1, 3.4.2
dev-util/ccache:          3.2
dev-util/cmake:           3.0.2
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.5
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.10.3, 1.11.6, 1.12.6, 1.13.4, 1.14.1
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.4.6-r1, 4.5.4, 4.6.3, 4.7.3-r1, 4.8.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.3-r2
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers)
sys-libs/glibc:           2.20
Repositories: gentoo rebutia qt x-portage
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA dlj-1.1 Mendeley-EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/polkit-1/actions /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=athlon64 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--autounmask=n"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="ftp://gentoo.lagis.at/ http://gentoo.mirror.dkm.cz/pub/gentoo/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.web4u.cz/ ftp://gentoo.mirror.web4u.cz/ ftp://ftp.klid.dk/gentoo/ http://mirror.uni-c.dk/pub/gentoo/ ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://mirror.netcologne.de/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://ftp.join.uni-muenster.de/pub/linux/distributions/gentoo http://gentoo.mneisen.org/ http://de-mirror.org/distro/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ ftp://de-mirror.org/distro/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp6.uni-erlangen.de/pub/mirrors/gentoo ftp://linux.rz.ruhr-uni-bochum.de/gentoo-mirror/ ftp://mirror.netcologne.de/gentoo/ ftp://ftp6.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp6.uni-muenster.de/pub/linux/distributions/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.ipv6.uni-muenster.de/pub/linux/distributions/gentoo ftp://gentoo.inf.elte.hu/ http://gentoo.inf.elte.hu/ http://ftp.heanet.ie/pub/gentoo/ ftp://ftp.heanet.ie/pub/gentoo/ ftp://ftp.df.lth.se/pub/gentoo/ http://mirror.switch.ch/ftp/mirror/gentoo/ ftp://mirror.switch.ch/mirror/gentoo/ http://gentoo.kiev.ua/ftp/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/rebutia /var/lib/layman/qt /usr/local/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="X Xaw3d a52 aac acl acpi aim alsa amd64 apm audiofile bash-completion berkdb bzip2 cairo cddb cdinstall cdparanoia cdr clamav cli consolekit cracklib crypt css curl curlwrappers cxx dbus directfb dri dvd dvdr dvdread encode ffmpeg fftw firefox flac fortran ftp gdbm geoip gif gimp glut graphite gstreamer gtk hddtemp iconv icq ieee1394 imagemagick imap imlib ipv6 jack java java6 javascript jikes joystick jpeg kde kde4 lame latex ldap libsamplerate libwww lm_sensors mad matroska mmx modules motif mp3 mpeg mplayer multilib ncurses nls nptl nsplugin offensive ogg openal opengl openmp openssl oscar pam pcre pdf perl png policykit posix python qt3support qt4 quicktime raw readline real rss scanner session sndfile sockets speex spell sse sse2 ssl suid svg symlink syslog tcl tcpd tetex theora threads tidy tiff tk translucency truetype udev unicode usb vaapi vdpau videos vorbis win32codecs wmf wxwindows x264 xcomposite xetex xine xml xpm xscreensaver xuby_targets_ruby20 xulrunner xv xvid zlib" ABI_X86="64 32" ALSA_CARDS="hda-intel usb-audio" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="openssl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_US en_US.utf8 de de_DE de_DE.utf8" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 N. Andrew Walsh 2014-11-23 19:10:59 UTC]

EDIT: Sorry. That error at the top of the previous post occurs at the end of emerging  app-accessibility/at-spi2-core-2.12.0-r1, NOT emul-linux-x86-gtklibs.

[Comment 2 Andrew Church 2014-11-23 21:53:28 UTC]

Additional lines needed in emul-linux-x86-gtklibs/files/remove-native-20140508-r3 (including for at-spi2-atk and gtk+:3) --

usr/lib32/gtk-2.0/modules/libatk-bridge.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-am-et.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-cedilla.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-cyrillic-translit.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-inuktitut.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-ipa.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-multipress.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-thai.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-ti-er.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-ti-et.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-viqr.so
usr/lib32/gtk-3.0/3.0.0/immodules/im-xim.so
usr/lib32/gtk-3.0/3.0.0/printbackends/libprintbackend-file.so
usr/lib32/gtk-3.0/3.0.0/printbackends/libprintbackend-lpr.so
usr/lib32/libatk-bridge-2.0.so
usr/lib32/libatk-bridge-2.0.so.0
usr/lib32/libatk-bridge-2.0.so.0.0.0
usr/lib32/libatspi.so
usr/lib32/libatspi.so.0
usr/lib32/libatspi.so.0.0.1
usr/lib32/libgailutil-3.so
usr/lib32/libgailutil-3.so.0.0.0
usr/lib32/libgdk-3.so
usr/lib32/libgdk-3.so.0
usr/lib32/libgtk-3.so
usr/lib32/libgtk-3.so.0
usr/lib32/pkgconfig/atk-bridge-2.0.pc
usr/lib32/pkgconfig/atspi-2.pc
usr/lib32/pkgconfig/gail-3.0.pc
usr/lib32/pkgconfig/gdk-3.0.pc
usr/lib32/pkgconfig/gdk-x11-3.0.pc
usr/lib32/pkgconfig/gtk+-3.0.pc
usr/lib32/pkgconfig/gtk+-unix-print-3.0.pc
usr/lib32/pkgconfig/gtk+-x11-3.0.pc

[Comment 3 Thomas Kear 2014-11-24 01:13:22 UTC]

(In reply to Andrew Church from comment #2)
> Additional lines needed in
> emul-linux-x86-gtklibs/files/remove-native-20140508-r3 (including for
> at-spi2-atk and gtk+:3) --
> 
> [...]

I also needed this for gtk+:3

usr/lib32/gtk-3.0/3.0.0/printbackends/libprintbackend-cups.so

[Comment 4 Andrew Church 2014-11-24 06:32:32 UTC]

Looks like this is fixed in >=emul-linux-x86-gtklibs-20140508-r4.

[Comment 5 Alexandre Rostovtsev (RETIRED) 2014-11-25 03:25:19 UTC]

This was fixed already, please resync :)

>  24 Nov 2014; Alexandre Rostovtsev <[e-mail]>
>  at-spi2-core-2.12.0-r1.ebuild:
>  Avoid file collision with emul-linux-x86-gtklibs.

>*emul-linux-x86-gtklibs-20140508-r4 (24 Nov 2014)
>
>  24 Nov 2014; Alexandre Rostovtsev <[e-mail]>
>  +emul-linux-x86-gtklibs-20140508-r4.ebuild, +files/remove-native-20140508-r4:
>  Add multilib at-spi2-core, at-spi2-atk, gtk+:3