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Bug 481604

Summary: dev-python/numpy-1.7.1 fails tests
Product: Gentoo Linux Reporter: Patrick Lauer <patrick>
Component: New packagesAssignee: Python Gentoo Team <python>
Status: RESOLVED DUPLICATE    
Severity: normal CC: ahudson.news, sci
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---

Description Patrick Lauer gentoo-dev 2013-08-19 08:49:48 UTC
======================================================================
ERROR: Failure: OSError (/var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy/core/multiarray.so: cannot open shared object file: No such file or directory)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib64/python3.2/site-packages/nose/failure.py", line 38, in runTest
    raise self.exc_val.with_traceback(self.tb)
  File "/usr/lib64/python3.2/site-packages/nose/loader.py", line 413, in loadTestsFromName
    addr.filename, addr.module)
  File "/usr/lib64/python3.2/site-packages/nose/importer.py", line 47, in importFromPath
    return self.importFromDir(dir_path, fqname)
  File "/usr/lib64/python3.2/site-packages/nose/importer.py", line 94, in importFromDir
    mod = load_module(part_fqname, fh, filename, desc)
  File "/var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy/tests/test_ctypeslib.py", line 9, in <module>
    cdll = load_library('multiarray', np.core.multiarray.__file__)
  File "/var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy/ctypeslib.py", line 131, in load_library
    raise exc
  File "/var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy/ctypeslib.py", line 128, in load_library
    return ctypes.cdll[libpath]
  File "/usr/lib64/python3.2/ctypes/__init__.py", line 428, in __getitem__
    return getattr(self, name)
  File "/usr/lib64/python3.2/ctypes/__init__.py", line 423, in __getattr__
    dll = self._dlltype(name)
  File "/usr/lib64/python3.2/ctypes/__init__.py", line 353, in __init__
    self._handle = _dlopen(self._name, mode)
OSError: /var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy/core/multiarray.so: cannot open shared object file: No such file or directory

----------------------------------------------------------------------
Ran 4820 tests in 35.776s

FAILED (KNOWNFAIL=6, SKIP=3, errors=1)
Running unit tests for numpy
NumPy version 1.7.1
NumPy is installed in /var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python3_2/build/test/lib/numpy
Python version 3.2.5 (default, Jul  7 2013, 19:58:27) [GCC 4.7.2]
nose version 1.3.0
.... * ERROR: dev-python/numpy-1.7.1::gentoo failed (test phase):
 *   Tests fail with python3.2
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_test
 *   environment, line 4241:  Called distutils-r1_src_test
........ *   environment, line 1379:  Called _distutils-r1_run_foreach_impl 'python_test'
................ *   environment, line  283:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_test'
...... *   environment, line 3930:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test'
.. *   environment, line 3143:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test'
. *   environment, line 3091:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test'
. *   environment, line 3089:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_test'
 *   environment, line 3134:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_test'
.. *   environment, line  821:  Called distutils-r1_run_phase 'python_test'
 *   environment, line 1315:  Called python_test
. *   environment, line 4003:  Called die
 * The specific snippet of code:
........ *   sys.exit(0 if r.wasSuccessful() else 1)" || die "Tests fail with ${EPYTHON}"
........ * 
.... * If you need support, post the output of `emerge --info '=dev-python/numpy-1.7.1::gentoo'`,
....... * the complete build log and the output of `emerge -pqv '=dev-python/numpy-1.7.1::gentoo'`.
/var/tmp/portage/._portage_reinstall_.6SPLDy/bin/isolated-functions.sh: line 188: wait: `Tests fail with python3.2': not a pid or valid job spec
...... * The complete build log is located at '/var/tmp/portage/dev-python/numpy-1.7.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/numpy-1.7.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/numpy-1.7.1/temp/python3.2'
 * S: '/var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1'
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................K....................................................
----------------------------------------------------------------------
Ran 4826 tests in 45.053s

OK (KNOWNFAIL=5, SKIP=3)
Running unit tests for numpy
NumPy version 1.7.1
NumPy is installed in /var/tmp/portage/dev-python/numpy-1.7.1/work/numpy-1.7.1-python2_7/build/test/lib/numpy
Python version 2.7.5 (default, Aug 19 2013, 11:17:36) [GCC 4.7.3]
nose version 1.3.0

>>> Failed to emerge dev-python/numpy-1.7.1, Log file:

Portage 2.2.0 (default/linux/amd64/13.0/desktop/kde, gcc-4.7.3, glibc-2.17, 3.10.7-gentoo x86_64)
=================================================================
System uname: Linux-3.10.7-gentoo-x86_64-AMD_FX-tm-8350_Eight-Core_Processor-with-gentoo-2.2
KiB Mem:    32922288 total,  14792000 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of tree: Unknown
ld GNU ld (GNU Binutils) 2.23.2
app-shells/bash:          4.2_p45
dev-lang/python:          2.7.5-r1, 3.2.5-r1, 3.3.2-r1
dev-util/cmake:           2.8.11.1
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.12.6, 1.13.4, 1.14
sys-devel/binutils:       2.23.2
sys-devel/gcc:            4.7.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.10 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo x-sunrise
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/polkit-1/actions"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/sunrise"
USE="X a52 aac acl acpi alisp alsa amd64 aria assistant berkdb bluetooth branding bzip2 cairo cdda cdr cgi cli compat consolekit corefonts cracklib crypt cups cxx dbus declarative dri dts dvd dvdr emacs emboss encode examples exif fam firefox flac fontconfig fortran gcj gd gdbm geos gif gpm gtk iconv icu ipv6 ithreads jpeg kde kdrive kipi lcms ldap libnotify mad minizip mmx mng modules mp3 mp4 mpeg mssql mudflap multilib mysql ncurses nls nptl objc ocaml ogg opengl openmp pam pango pcre pdf perl plasma png policykit ppds pyqt4 python qt3support qt4 readline script sdl semantic-desktop session soundex spell sqlite sse sse2 ssl startup-notification svg tcpd threads tiff tk truetype udev udisks unicode upower usb vorbis wxwidgets x264 xa xattr xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="dummy fbdev glint intel mach64 nouveau nv r128 radeon savage sis tdfx trident v4l vesa via" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON
Comment 1 Dirkjan Ochtman (RETIRED) gentoo-dev 2013-08-19 13:25:46 UTC
You should really add all maintainers.
Comment 2 ahudson.news 2013-08-22 14:49:23 UTC
During a rebuild of @system, I ran into the same problem with 1.6.2-r2 just now; the previous build of 1.6.2-r2 was fine (unfortunately that's 174 days ago... so not very helpful).
Comment 3 Sébastien Fabbro (RETIRED) gentoo-dev 2013-08-27 18:30:46 UTC

*** This bug has been marked as a duplicate of bug 470946 ***