Summary: | sci-physics/geant-4.9.6_p02-r1 - fatal error: Inventor/Xt/SoXtCursor.h: No such file or directory | ||
---|---|---|---|
Product: | Gentoo Linux | Reporter: | Robert Penny <rob> |
Component: | Current packages | Assignee: | Gentoo Science Physics related packages <sci-physics> |
Status: | RESOLVED FIXED | ||
Severity: | normal | ||
Priority: | Normal | ||
Version: | unspecified | ||
Hardware: | AMD64 | ||
OS: | Linux | ||
Whiteboard: | |||
Package list: | Runtime testing required: | --- | |
Attachments: | build.log.bz2 |
Description
Robert Penny
2013-06-14 19:51:22 UTC
emerge --info Portage 2.1.11.62 (default/linux/amd64/13.0/desktop/gnome, gcc-4.6.3, glibc-2.15-r3, 3.4.34-gentoo x86_64) ================================================================= System uname: Linux-3.4.34-gentoo-x86_64-Intel-R-_Core-TM-_i7-3930K_CPU_@_3.20GHz-with-gentoo-2.2 KiB Mem: 32845540 total, 25121000 free KiB Swap: 16383992 total, 16383992 free Timestamp of tree: Fri, 14 Jun 2013 18:30:01 +0000 ld GNU ld (GNU Binutils) 2.22 ccache version 3.1.9 [disabled] app-shells/bash: 4.2_p45 dev-java/java-config: 2.1.12-r1 dev-lang/python: 2.7.3-r3, 3.2.3-r2 dev-util/ccache: 3.1.9 dev-util/cmake: 2.8.10.2-r2 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.11.8 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.6, 1.12.6 sys-devel/binutils: 2.22-r1 sys-devel/gcc: 4.6.3 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.7 (virtual/os-headers) sys-libs/glibc: 2.15-r3 Repositories: gentoo seden java-overlay ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=corei7 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/bind" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=corei7 -O2 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="ftp://mirror.iawnet.sandia.gov/pub/gentoo/ http://mirror.iawnet.sandia.gov/gentoo/ http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/ ftp://gentoo.mirrors.tds.net/gentoo ftp://mirror.iawnet.sandia.gov/pub/gentoo/ ftp://ftp.ucsb.edu/pub/mirrors/linux/gentoo/" LANG="C" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j13" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/seden /var/lib/layman/java-overlay" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 berkdb bindist bluetooth branding bzip2 cairo cdda cdr cli colord consolekit cracklib crypt cups cxx dbus device-mapper dmraid dri dts dvd dvdr eds emboss encode evo exif fam firefox flac fortran gdbm gif git gnome gnome-keyring gnome-online-accounts gpm gstreamer gtk iconv ipv6 jpeg lcms ldap libnotify libsecret mad mdadm mmx mng modules mp3 mp4 mpeg mudflap multilib nautilus ncurses nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt3support qt4 readline sdl session socialweb spell sse sse2 sse3 sse4_1 sse4_2 ssl ssse3 startup-notification subversion svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xcb xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse wacom synaptics evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON Please attach the entire build log to this bug report. Created attachment 351032 [details]
build.log.bz2
Attaching bzipped copy of failed build.log.
+ 17 Jun 2013; Sébastien Fabbro <bicatali@gentoo.org> -geant-4.9.6_p02.ebuild, + geant-4.9.6_p02-r1.ebuild, metadata.xml: + Switch optional OpenInventor to Coin3D SoXt implementation, fixing bug #473306 + and bug #473396 + Hi Sébastien. I'm not sure I understand your resolution. I do have media-libs/coin-3.1.3-r2 installed. When I look at the manifest of files installed by coin there seems to be no installation of SoXt. Should I file a bug report against coin for not installing SoXt? Please forgive me if this is misguided in some sense. I just can't see any use flags for coin that cause SoXt to be generated. Thanks, -Rob. you have to re-sync your tree. in order to fix this bug, i had to introduce a new package: media-libs/SoXt The manifest is failing. I can force the manifest to rebuild locally but thought I should point it out in case more needed to be done to update the portage tree. $ sudo emerge --deep --pretend geant These are the packages that would be merged, in order: Calculating dependencies | * Digest verification failed: * /usr/portage/sci-physics/geant/geant-4.9.6_p02-r1.ebuild * Reason: Filesize does not match recorded size * Got: 2758 * Expected: 2712 ... done! (In reply to Robert Penny from comment #7) > Calculating dependencies | * Digest verification failed: > * /usr/portage/sci-physics/geant/geant-4.9.6_p02-r1.ebuild > * Reason: Filesize does not match recorded size hmm, not getting it here. i suspect something screwed up during the commit, so i committed a new manifest. re-sync after a while, it takes time to hit the mirrors. I manually updated my manifest (ebuild geant-4.9.6_p02-r1.ebuild manifest) and got a successful build of.. media-libs/SoXt-1.3.0 sci-physics/geant-4.9.6_p02-r1 ...on ~amd64. I'm getting a compilation error when compiling some of my existing GEANT code against the installation, but I don't think that's a problem with the installation per se. I'm tracking this down. Thanks so much for turning this around so quickly! It's very much appreciated. I found the problem in my test code. It was completely my fault and nothing to do with the GEANT library or the ebuild. So, I can confirm the bug is resolved on my ~amd64 architecture. Thanks so much Sébastien. Very much appreciated!! |