Summary: | sci-biology/vaal-45166 please stabilize | ||
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Product: | Gentoo Linux | Reporter: | Justin Lecher (RETIRED) <jlec> |
Component: | [OLD] Keywording and Stabilization | Assignee: | Gentoo Science Biology related packages <sci-biology> |
Status: | RESOLVED FIXED | ||
Severity: | enhancement | Keywords: | STABLEREQ |
Priority: | Normal | ||
Version: | unspecified | ||
Hardware: | All | ||
OS: | Linux | ||
Whiteboard: | |||
Package list: | Runtime testing required: | --- | |
Bug Depends on: | 467274, 488550 | ||
Bug Blocks: |
Description
Justin Lecher (RETIRED)
2013-06-02 12:08:15 UTC
Testsuite: mkdir test/2039F.2 cd test/2039F.2 wget ftp://ftp.broadinstitute.org/pub/crd/VAAL/bacterial_lanes/2039F.2.fasta.gz wget ftp://ftp.broadinstitute.org/pub/crd/VAAL/bacterial_lanes/2039F.2.qual.gz wget ftp://ftp.broadinstitute.org/pub/crd/VAAL/bacterial_references/E.coli.fasta.gz for i in *gz; do gunzip $i; done cd .. VAALrun SOURCE=2039F.2 REF=E.coli VECSEQ=v Failed... configure: Configure failed with the error message: You must compile this with g++ 4.7 or higher. configure: configure: Common error conditions in the build process are documented configure: on our wiki page: configure: http://www.broadinstitute.org/crd/wiki/index.php/Build_FAQ configure: We also offer email support at crdhelp@broadinstitute.org configure: error: in `/var/tmp/portage/sci-biology/vaal-45166/work/vaal-45166_build': configure: error: Configure failed. See `config.log' for more details Then we need to wait for gcc-4.7. I don't know why but upstream things this is a good idea. + 12 Nov 2013; Justin Lecher <jlec@gentoo.org> vaal-1.6.ebuild, + vaal-42179.ebuild, vaal-45166.ebuild, vaal-46233.ebuild: + Drop x86 as upstream gives no support and types are not easily fixable, + #458488, #472088 & #488550 + |