Bug 434010 – dev-java/icedtea-7.2.3.2[pax_kernel] fails to build: java does not have a PT_PAX_FLAGS program header, try conversion

• Product: Gentoo Linux
• Status: RESOLVED OBSOLETE

[Description Michael Palimaka (kensington) 2012-09-05 10:30:40 UTC]

Build of dev-java/icedtea-7.2.3.2[pax_kernel] fails: 

"../../../.."/../../pax-mark-vm "/var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot"
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/java
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/java does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/keytool
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/keytool does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/pack200
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/pack200 does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/policytool
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/policytool does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/rmid
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/rmid does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/rmiregistry
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/rmiregistry does not have a PT_PAX_FLAGS program header, try conversion
PaX mark -m /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/unpack200
file /var/tmp/portage/dev-java/icedtea-7.2.3.2/work/icedtea-2.3.2/openjdk.build-boot/bin/unpack200 does not have a PT_PAX_FLAGS program header, try conversion


GENTOO_VM=icedtea-7  CLASSPATH="" JAVA_HOME=""
JAVACFLAGS="" COMPILER=""

Portage 2.1.11.13 (hardened/linux/amd64, gcc-4.7.1-asneeded, glibc-2.15-r2, 3.5.3-hardened-gnu x86_64)
=================================================================
System uname: Linux-3.5.3-hardened-gnu-x86_64-06-17-with-gentoo-2.2
Timestamp of tree: Wed, 05 Sep 2012 07:45:01 +0000
app-shells/bash:          4.2_p37
dev-java/java-config:     2.1.12
dev-lang/python:          2.7.3-r2, 3.2.3-r1
dev-util/cmake:           2.8.9
dev-util/pkgconfig:       0.27.1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.10.5
sys-apps/sandbox:         2.6
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.11.6, 1.12.3
sys-devel/binutils:       2.22.90
sys-devel/gcc:            4.7.1
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r3
sys-kernel/linux-headers: 3.5 (virtual/os-headers)
sys-libs/glibc:           2.15-r2
Repositories: gentoo kensington qt kde sunrise x-portage
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /var/qmail/alias /var/qmail/control"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-march=native -O2 -pipe"
FEATURES="assume-digests binpkg-logs collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles multilib-strict news parallel-fetch protect-owned sandbox sfperms sign split-elog split-log splitdebug strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://mirror.internode.on.net/pub/gentoo/ http://distfiles.gentoo.org/"
LANG="en_AU.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu"
LINGUAS="en"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/kensington /var/lib/layman/qt /var/lib/layman/kde /var/lib/layman/sunrise /usr/local/portage"
SYNC="rsync://rsync.au.gentoo.org/gentoo-portage"
USE="aac acl acpi alsa amd64 apache2 apng asf background bash-completion bazaar berkdb bzip2 cairo cleartype cli consolekit corefonts cracklib crashreporter crypt cups cxx dbus deblob dep device-mapper dri dvd ebook exceptions fam ffmpeg flac fontconfig gdbm git glib gmp gold gpm handbook hardened iconv ipv6 ithreads jit jpeg justify kde kontact lastfm less libnotify mikmod minizip mmx mng modules mp3 mp4 mpeg mta mudflap multilib ncurses nls nptl nptlonly ogg opengl openmp pam pax_kernel pcap pcre phonon player png policykit pppd private-headers qt3support qt4 readline rss semantic-desktop session sftp sha512 smbclient spell sse sse2 ssl ssse3 startup-notification suhosin svg symlink tcpd theora threads threadsafe tiff truetype udev unicode upnp uuid vhosts vorbis webm xft xscreensaver xvfb zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="*" APACHE2_MODULES="dav alias auth_basic authn_default auth_digest authn_file authz_host authz_user autoindex cgi deflate dir filter headers include info log_config mime mime_magic negotiation proxy proxy_http rewrite speling status vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DRACUT_MODULES="crypt crypt-gpg lvm mdraid" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en" PHP_TARGETS="php5-4" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby19" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Michael Palimaka (kensington) 2012-09-05 10:33:11 UTC]

Created attachment 322976 [details]
build.log

Build log, compressed due to size.

[Comment 2 Michael Palimaka (kensington) 2012-09-05 10:34:29 UTC]

Created attachment 322978 [details, diff]
icedtea-7.2.3.1-pax-workaround.patch

A workaround I am using to create the appropriate header.

[Comment 3 iGentoo 2012-12-03 04:20:28 UTC]

Which linker do you use? gold?

[Comment 4 Michael Palimaka (kensington) 2012-12-03 09:47:07 UTC]

(In reply to comment #3)
> Which linker do you use? gold?

Normally yes.

[Comment 5 iGentoo 2012-12-04 18:40:49 UTC]

Here is a patch for creating PT_PAX_FLAGS program header:
https://bugs.gentoo.org/attachment.cgi?id=327284&action=diff

[Comment 6 Michael Palimaka (kensington) 2013-08-27 15:56:13 UTC]

Seems to be working now with portage's xattr support.