| Summary: | dev-lang/python-2.7.3-r1, dev-lang/python-3.2.3: nonzero padding in e_ident | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Nikos Chantziaras <realnc> |
| Component: | [OLD] Development | Assignee: | Python Gentoo Team <python> |
| Status: | RESOLVED DUPLICATE | ||
| Severity: | normal | CC: | asturm, casta, marduk, octoploid, sendit2billp |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | AMD64 | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | |||
| Bug Blocks: | 413751 | ||
| Attachments: | build.log | ||
|
Description
Nikos Chantziaras
2012-04-26 20:28:18 UTC
Forgot to mention that running "revdep-rebuild -i" doesn't find anything that needs rebuilding. It's the PAX crap that's responsible for this. emerge -C pax-utils echo "app-misc/pax-utils-0.3.0" >> /etc/portage/profile/package.provided solves the issue. Same with python-3.2.3 I can confirm this on my ~amd64 box [1], with the same e_ident error either with pax-utils 0.2.3 and 0.3.0 [2], but it compiles fine on my *hardened* ~amd64 box [3]
[1]
$ emerge --info python
Portage 2.2.0_alpha101 (default/linux/amd64/10.0/desktop, gcc-4.5.3, glibc-2.15-r1, 3.3.3-gentoo x86_64)
=================================================================
System Settings
=================================================================
System uname: Linux-3.3.3-gentoo-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q9300_@_2.50GHz-with-gentoo-2.1
Timestamp of tree: Thu, 26 Apr 2012 19:30:01 +0000
app-shells/bash: 4.2_p24-r1
dev-java/java-config: 2.1.11-r3
dev-lang/python: 2.7.3, 3.2.2-r1
dev-util/cmake: 2.8.7-r5
dev-util/pkgconfig: 0.26
sys-apps/baselayout: 2.1
sys-apps/openrc: 0.9.9.3
sys-apps/sandbox: 2.5
sys-devel/autoconf: 2.13, 2.69
sys-devel/automake: 1.9.6-r3, 1.11.5
sys-devel/binutils: 2.22-r1
sys-devel/gcc: 4.5.3-r2
sys-devel/gcc-config: 1.7
sys-devel/libtool: 2.4.2
sys-devel/make: 3.82-r3
sys-kernel/linux-headers: 3.3 (virtual/os-headers)
sys-libs/glibc: 2.15-r1
Repositories: gentoo gcpan_overlay xwing local
Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -mtune=native -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa /usr/share/themes/oxygen-gtk/gtk-2.0"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -mtune=native -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps y"
FEATURES="assume-digests binpkg-logs buildsyspkg collision-protect distlocks ebuild-locks fixlafiles metadata-transfer news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS=""
GENTOO_MIRRORS="ftp://ftp.free.fr/mirrors/ftp.gentoo.org/ ftp://mirror.switch.ch/mirror/gentoo/ http://trumpetti.atm.tut.fi/gentoo/ http://mirror.ovh.net/gentoo-distfiles/ http://gentoo.tiscali.nl/"
LANG="fr_FR.UTF-8"
LC_ALL="fr_FR.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common"
LINGUAS="fr"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/gcpan-portage /usr/local/portage/portage /usr/local/portage/local-portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi additions alsa amd64 bash-completion branding bzip2 cairo caps cdda cdr cli consolekit cracklib crypt cups cxx dbus dri dts dvb dvd dvdnav dvdr emboss encode exif extensions firefox flac fontconfig fortran fr g3dvl gdu gif gles gles2 gpm gtk iconv idn iproute2 ipv6 ithreads jpeg kde lcms libnotify live llvm lzma mad matroska minizip mmx mng modules mozilla mp3 mp4 mpeg mudflap multilib ncurses network nls nptl nptlonly nsplugin ofx ogg opengl openmp openssl pam pango pcre pdf png policykit pppd qt3support qt4 rdesktop readline sasl scanner semantic-desktop session spell sse sse2 sse3 sse4_1 ssl ssse3 startup-notification svg sysfs tcpd theora threads tiff truetype udev unicode usb v4l v4l2 vaapi vdpau vim-pager vim-syntax vnc vorbis x264 xattr xcb xml xorg xulrunner xv xvid xvmc zip zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="fr" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi gzip headers_more limit_req limit_zone map proxy realip referer rewrite stub_status upstream_ip_hash userid" PHP_TARGETS="php5-4" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CPPFLAGS, CTARGET, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
=================================================================
Package Settings
=================================================================
dev-lang/python-2.7.3 was built with the following:
USE="ipv6 (multilib) ncurses readline sqlite ssl threads (wide-unicode) xml -berkdb -build -doc -examples -gdbm -tk -wininst"
CFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
CXXFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common -L."
dev-lang/python-3.2.2-r1 was built with the following:
USE="ipv6 (multilib) ncurses readline sqlite ssl threads (wide-unicode) xml -build -doc -examples -gdbm -tk -wininst"
CFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
CXXFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common -L."
[2]
./python: error while loading shared libraries: /var/tmp/portage/dev-lang/python-3.2.3/work/Python-3.2.3/libpython3.2.so.1.0: nonzero padding in e_ident
[3]
# emerge --info python
Portage 2.2.0_alpha101 (hardened/linux/amd64/no-multilib, gcc-4.5.3, glibc-2.15-r1, 3.3.3-hardened x86_64)
=================================================================
System Settings
=================================================================
System uname: Linux-3.3.3-hardened-x86_64-Intel-R-_Atom-TM-_CPU_D510_@_1.66GHz-with-gentoo-2.1
Timestamp of tree: Thu, 26 Apr 2012 19:30:01 +0000
app-shells/bash: 4.2_p24-r1
dev-lang/python: 2.7.3-r1, 3.2.3
dev-util/cmake: 2.8.7-r5
dev-util/pkgconfig: 0.26
sys-apps/baselayout: 2.1
sys-apps/openrc: 0.9.9.3
sys-apps/sandbox: 2.5
sys-devel/autoconf: 2.69
sys-devel/automake: 1.11.5
sys-devel/binutils: 2.22-r1
sys-devel/gcc: 4.5.3-r2
sys-devel/gcc-config: 1.7
sys-devel/libtool: 2.4.2
sys-devel/make: 3.82-r3
sys-kernel/linux-headers: 3.3 (virtual/os-headers)
sys-libs/glibc: 2.15-r1
Repositories: gentoo gcpan xwing local_portage
Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -mtune=native -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -mtune=native -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps y"
FEATURES="assume-digests binpkg-logs buildsyspkg collision-protect distlocks ebuild-locks fixlafiles metadata-transfer news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS=""
GENTOO_MIRRORS="http://dagobah.xwing.info/ ftp://ftp.free.fr/mirrors/ftp.gentoo.org/ http://mirror.ovh.net/gentoo-distfiles/ http://gentoo.tiscali.nl/"
LANG="fr_FR.utf8"
LC_ALL="fr_FR.utf8"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common"
LINGUAS="fr"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/gcpan-portage /usr/local/portage/portage /usr/local/portage/local-portage"
SYNC="rsync://dagobah.xwing.info/gentoo-portage"
USE="acl acpi amd64 bash-completion bashlogger bzip2 caps cli cracklib crypt cups cxx dri fontconfig hardened iconv idled idn iproute2 ipv6 ithreads jpeg justify mmx mudflap ncurses nls nptl nptlonly openldap openmp pam pax_kernel pcre png pppd readline sasl session sieve sse sse2 sse3 ssl ssse3 sysfs syslog tcpd threads tiff truetype udev unicode urandom usb vim-pager vim-syntax xattr xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="fr" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi gzip headers_more limit_req limit_zone map proxy realip referer rewrite stub_status upstream_ip_hash userid" PHP_TARGETS="php5-4" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CPPFLAGS, CTARGET, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
=================================================================
Package Settings
=================================================================
dev-lang/python-2.7.3-r1 was built with the following:
USE="ipv6 ncurses readline sqlite ssl threads (wide-unicode) xml -berkdb -build -doc -examples -gdbm -tk -wininst"
CFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
CXXFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common -L."
dev-lang/python-3.2.3 was built with the following:
USE="ipv6 ncurses readline sqlite ssl threads (wide-unicode) xml -build -doc -examples -gdbm -tk -wininst"
CFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
CXXFLAGS="-march=native -O2 -mtune=native -pipe -fwrapv"
LDFLAGS="-Wl,-O1 -Wl,--hash-style=gnu -Wl,--as-needed -Wl,--sort-common -L."
I had this issue with both python-2.7.3-r1 and and python-3.2.3 today on my ~amd64 laptop. So this problem can be confirmed. (In reply to comment #2) > It's the PAX crap that's responsible for this. > > emerge -C pax-utils > echo "app-misc/pax-utils-0.3.0" >> /etc/portage/profile/package.provided > > solves the issue. This may be a work around but does it solve anything? If you trick portage into thinking a package is installed when it isn't then doesn't that defeat the the purpose of checking dependencies and having said package be required in the first place? To get them to both compile I took another route. I 'emerge -C pax-utils' then emerge -1 --nodeps python:2.7 python:3.2 then emerge -uND @world which pulled pax-utils back in to be emerged. A temporary Workaround without tricking portage about pax-utils being present. Ciao My bad. I dropped a dependency on sys-apps/paxctl. It probably works better than pax-utils. That would also explain why it works on hardened. I have re-added that dependency. Please let me know if that resolves this for you. *** Bug 413679 has been marked as a duplicate of this bug. *** I've actually dropped the pax-mark on libpython entirely, since pax markings on a shared library don't actually do anything. *** Bug 413683 has been marked as a duplicate of this bug. *** Thanks working fine now ! About the paxctl dependency: shouldn't this dep be handled by the pax-utils eclass rather than at ebuild level ? *** This bug has been marked as a duplicate of bug 411919 *** Worked lie a charm for me too! |
