Bug 395905

Summary:	[science-overlay] embassy-esim4-1.0.0-r7 fails to fetch embassy-esim4-1.0.0-r7.tar.gz
Product:	Gentoo Linux	Reporter:	Juergen Rose <rose>
Component:	New packages	Assignee:	Gentoo Science Related Packages <sci>
Status:	RESOLVED OBSOLETE
Severity:	normal
Priority:	Normal
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Attachments:	embassy-esim4 ebuild which solved the issue

Description Juergen Rose 2011-12-24 15:46:02 UTC

'emerge world' fails with:

root@impala:/usr/local/portage/sci-biology(394)# emerge -uvND world
These are the packages that would be merged, in order:
Calculating dependencies... done!
[ebuild     U  ] sci-biology/embassy-esim4-1.0.0-r7 [1.0.0-r6] USE="X mysql%* pdf%* png postgres%* -static-libs%" 0 kB [0=>1]
...
>>> Starting parallel fetch

>>> Emerging (1 of 5) sci-biology/embassy-esim4-1.0.0-r7 from science
 * Fetching files in the background. To view fetch progress, run
 * `tail -f /var/log/emerge-fetch.log` in another terminal.
!!! Fetched file: embassy-esim4-1.0.0-r7.tar.gz VERIFY FAILED!
!!! Reason: Insufficient data for checksum verification

Comment 1 Juergen Rose 2011-12-24 15:53:43 UTC

Created attachment 296867 [details]
embassy-esim4 ebuild which solved the issue

SRC_URI added and patch removed. After deleting Manifest I could emerge with this ebuild embassy-esim4.

Comment 2 Justin Lecher (RETIRED) gentoo-dev

2012-02-20 14:34:14 UTC

# Justin Lecher <jlec@gentoo.org> (20 Feb 2012)
# They are broken in one or the other way
# Need to be bumped to emboss-6.4.0
sci-biology/emboss::science
sci-biology/embassy::science
sci-biology/embassy-cbstools::science
sci-biology/embassy-domainatrix::science
sci-biology/embassy-domalign::science
sci-biology/embassy-domsearch::science
sci-biology/embassy-emnu::science
sci-biology/embassy-esim4::science
sci-biology/embassy-hmmer::science
sci-biology/embassy-iprscan::science
sci-biology/embassy-mse::science
sci-biology/embassy-phylipnew::science
sci-biology/embassy-signature::science
sci-biology/embassy-structure::science
sci-biology/embassy-topo::science
sci-biology/embassy-vienna::science