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Bug 395901

Summary: [science-overlay] embassy-hmmer fails to fetch embassy-hmmer-2.3.2-r4.tar.gz
Product: Gentoo Linux Reporter: Juergen Rose <rose>
Component: New packagesAssignee: Gentoo Science Related Packages <sci>
Status: RESOLVED OBSOLETE    
Severity: normal    
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---

Description Juergen Rose 2011-12-24 15:06:21 UTC
'emerge world' fails with:

root@impala:/usr/local/portage/sci-biology(380)# emerge -uvND world

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U  ] sci-biology/embassy-hmmer-2.3.2-r4 [2.3.2-r3] USE="X mysql%* pdf%* png postgres%* -static-libs%" 0 kB [0=>1]
...
>>> Emerging (1 of 8) sci-biology/embassy-hmmer-2.3.2-r4 from science
 * Fetching files in the background. To view fetch progress, run
 * `tail -f /var/log/emerge-fetch.log` in another terminal.
!!! Fetched file: embassy-hmmer-2.3.2-r4.tar.gz VERIFY FAILED!
!!! Reason: Insufficient data for checksum verification


Reproducible: Always
Comment 1 Justin Lecher gentoo-dev 2012-02-20 14:34:18 UTC
# Justin Lecher <jlec@gentoo.org> (20 Feb 2012)
# They are broken in one or the other way
# Need to be bumped to emboss-6.4.0
sci-biology/emboss::science
sci-biology/embassy::science
sci-biology/embassy-cbstools::science
sci-biology/embassy-domainatrix::science
sci-biology/embassy-domalign::science
sci-biology/embassy-domsearch::science
sci-biology/embassy-emnu::science
sci-biology/embassy-esim4::science
sci-biology/embassy-hmmer::science
sci-biology/embassy-iprscan::science
sci-biology/embassy-mse::science
sci-biology/embassy-phylipnew::science
sci-biology/embassy-signature::science
sci-biology/embassy-structure::science
sci-biology/embassy-topo::science
sci-biology/embassy-vienna::science