Bug 361933

Summary:	=sci-chemistry/gromacs-4.5.4 fails to compile with USE="sse -sse2"
Product:	Gentoo Linux	Reporter:	Andreas Schürch <nativemad>
Component:	New packages	Assignee:	Christoph Junghans (RETIRED) <junghans>
Status:	RESOLVED FIXED
Severity:	normal	CC:	sci-chemistry
Priority:	Normal
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	357017
Attachments:	USE="sse -ssse2" build.log

Description Andreas Schürch gentoo-dev

2011-04-04 17:22:46 UTC

Created attachment 268485 [details]
USE="sse -ssse2" build.log

=sci-chemistry/gromacs-4.5.4
fails to compile with USE="sse -sse2" here on x86.

Portage 2.1.9.42 (default/linux/x86/10.0, gcc-4.4.5, glibc-2.11.3-r0, 2.6.36-gentoo-r5 i686)
=================================================================
System uname: Linux-2.6.36-gentoo-r5-i686-QEMU_Virtual_CPU_version_0.13.0-with-gentoo-1.12.14
Timestamp of tree: Mon, 04 Apr 2011 05:00:01 +0000
distcc 3.1 i686-pc-linux-gnu [disabled]
app-shells/bash:     4.1_p9
dev-java/java-config: 2.1.11-r3
dev-lang/python:     2.6.6-r2, 3.1.3-r1
dev-util/cmake:      2.8.4
sys-apps/baselayout: 1.12.14-r1
sys-apps/sandbox:    2.4
sys-devel/autoconf:  2.13, 2.65-r1
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.4.5
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.36.1 (sys-kernel/linux-headers)
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=i686 -fomit-frame-pointer -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /home/mythtv/ /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa /var/qmail/alias /var/qmail/control"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=i686 -fomit-frame-pointer -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS=""
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="de"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X acl apache2 assistant autoipd berkdb bzip2 cairo cli consolekit cracklib crypt cups cxx dbus device-mapper dri encode extras fontconfig fortran ftp gd gdbm gpm gs gtk iconv icu imap ipv6 java jpeg kde lcms modules mssql mudflap mysql mysqli ncurses nls nptl nptlonly objc ogg opengl openmp pam pcre perl png policykit postgres pppd python qt3support qt4 readline semantic-desktop session sql sqlite ssl svg sysfs tcpd threads tiff tordns truetype unicode webkit x86 xml xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="cirrus vesa fbdev" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY

Comment 1 Christoph Junghans (RETIRED) gentoo-dev

2011-04-04 17:57:03 UTC

I see, even single precision kernels need sse2. I will drop the sse use flag.

Comment 2 Christoph Junghans (RETIRED) gentoo-dev

2011-04-04 18:48:34 UTC

fixed without revision bump as no installed content was changed.