Bug 314811 – dev-lang/python-2.6.4-r1 build fails. Failed modules: _elementtree pyexpat Can't find bsddb185 sunaudiodev

• Product: Gentoo Linux
• Status: RESOLVED INVALID

[Description Alex Cannon 2010-04-12 14:04:09 UTC]

These are the packages that would be merged, in order:

Calculating dependencies  ....... done!
[ebuild     U ] dev-lang/python-2.6.4-r1 [2.6.2-r1] USE="berkdb gdbm ipv6 ncurses readline ssl threads (wide-unicode%*) xml -build -doc -examples -sqlite -tk -wininst (-ucs2%)" 0 kB

Total: 1 package (1 upgrade), Size of downloads: 0 kB

==============================================================

At the end of the python build this is what I get. After that the usual portage build failure messages come up.

Failed to find the necessary bits to build these modules:
bsddb185           sunaudiodev
To find the necessary bits, look in setup.py in detect_modules() for the module's name.


Failed to build these modules:
_elementtree       pyexpat

==============================================================

Reproducible: Always




emerge --info:
Portage 2.1.7.17 (default/linux/x86/10.0, gcc-4.3.4, glibc-2.10.1-r1, 2.6.31-gentoo-r10 i686)
=================================================================
System uname: Linux-2.6.31-gentoo-r10-i686-Pentium_III_-Katmai-with-gentoo-1.12.13
Timestamp of tree: Tue, 06 Apr 2010 00:00:01 +0000
app-shells/bash:     4.0_p37
dev-lang/python:     2.5.4-r3, 2.6.2-r1
dev-python/pycrypto: 2.1.0_beta1
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.5, 1.7.9-r1, 1.8.5-r4, 1.9.6-r2, 1.10.3, 1.11.1
sys-devel/binutils:  2.18-r3
sys-devel/gcc:       4.3.4
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
CBUILD="i586-pc-linux-gnu"
CFLAGS="-O2 -march=pentium3 -fomit-frame-pointer"
CHOST="i586-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /var/bind /var/qmail/alias /var/qmail/control /var/vpopmail/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=pentium3 -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests distlocks fixpackages news parallel-fetch protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="http://gentoo.osuosl.org/ ftp://ftp.gtlib.cc.gatech.edu/pub/gentoo http://csociety-ftp.ecn.purdue.edu/pub/gentoo/ http://mirror.tucdemonic.org/gentoo/ http://gentoo.llarian.net/ http://mirror.datapipe.net/gentoo http://chod.cwru.edu/gentoo ftp://chod.cwru.edu/gentoo ftp://linux.cs.lewisu.edu/gentoo/ http://mirror.usu.edu/mirrors/gentoo/"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acc acl alsa apache2 berkdb bittorrent bzip2 cddb cdparanoia cli cracklib crypt cups cxx dga directfb divx4linux dri dvd dvdread encode esd esound exif extras faad fasttrack ffmpeg finger fltk foomaticdb fortran ftp gdbm gif gimp gimpprint gnutella gopher gpm gtk iconv idn imagemagick imap imlib innodb ipv6 javascript joystick jpeg live lua mad maildir mmx modules motif mp2 mp3 mpeg mudflap mysql nas ncurses nls nntp nptl nptlonly ogg openft openmp pam pcre perl png pnm ppds pppd pulseaudio qt3 quicktime readline reflection ruby sasl scanner sdl session slp snmp softmmu speex spl sse ssl sve svg sysfs tcpd theora tiff truetype unicode usb v4l vchkpw vorbis x264 x86 xft xml xmms xorg xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nv r128 radeon savage sis tdfx trident vesa via vmware voodoo" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY

[Comment 1 Rafał Mużyło 2010-04-12 17:30:30 UTC]

Would you mind attaching build log ?
So, you know, somebody could get a look at the real error.

[Comment 2 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-13 15:09:34 UTC]

Reinstall expat and attach build log.

[Comment 3 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-13 15:10:58 UTC]

*** Bug 314921 has been marked as a duplicate of this bug. ***

[Comment 4 Alex Cannon 2010-04-14 04:43:55 UTC]

Created attachment 227713 [details]
Build log for python-2.6.4-r1

[Comment 5 Alex Cannon 2010-04-14 04:45:37 UTC]

I attached the build.log file.

How do I install expat? eix -s / -S expat shows nothing.

[Comment 6 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-14 07:13:44 UTC]

Post the output of: emerge -ptv dev-libs/expat

[Comment 7 Alex Cannon 2010-04-14 12:12:18 UTC]

emerge -ptv dev-libs/expat

These are the packages that would be merged, in reverse order:

Calculating dependencies... done!
[ebuild   R   ] dev-libs/expat-2.0.1-r3  0 kB

Total: 1 package (1 reinstall), Size of downloads: 0 kB

[Comment 8 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-14 17:30:12 UTC]

Please run: emerge -1 dev-libs/expat

[Comment 9 Alex Cannon 2010-04-14 22:08:20 UTC]

Created attachment 227823 [details]
emerge -l dev-libs/expat log file

[Comment 10 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-15 03:55:56 UTC]

Does the original problem still occur?

[Comment 11 Alex Cannon 2010-04-15 12:37:47 UTC]

Still the same problem with emerge python

[Comment 12 Rafał Mużyło 2010-04-16 11:55:27 UTC]

Comparing with my own build log, my first guess would be:
'-I/usr/local/include', that is 'it's time for a purge'.
Check whole /usr/local.

[Comment 13 Alex Cannon 2010-04-16 17:51:33 UTC]

Thanks! I renamed /usr/local and python installed. Is the /usr/local issue still considered to be a bug in the python build? I don't know what file was in /usr/local that would have been causing the problem.

[Comment 14 Arfrever Frehtes Taifersar Arahesis (RETIRED) 2010-04-16 17:56:28 UTC]

(In reply to comment #13)
> Is the /usr/local issue still considered to be a bug in the python build?

No.

> I don't know what file was in /usr/local that would have been causing
> the problem.

Probably headers of an older (manually installed) version of expat.