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Bug 305849

Summary: sci-biology/TopHat: new package request
Product: Gentoo Linux Reporter: Martin Mokrejš <mmokrejs>
Component: New packagesAssignee: Gentoo Linux bug wranglers <bug-wranglers>
Status: RESOLVED INVALID    
Severity: enhancement    
Priority: High    
Version: unspecified   
Hardware: All   
OS: Linux   
URL: http://tophat.cbcb.umd.edu
Whiteboard:
Package list:
Runtime testing required: ---

Description Martin Mokrejš 2010-02-19 09:39:52 UTC
http://bioinformatics.oxfordjournals.org/cgi/content/full/25/9/1105

TopHat is a a fast short-read aligner using bowtie to align RNA-Seq reads (25-50nt) to reference transcriptome/genome.
Comment 1 Martin Mokrejš 2010-02-19 09:41:57 UTC
Sorry, the searches did not show me the already existing tophat package, don't know why.