Bug 297536

Summary:	sci-biology/eugene installs ELF files in /usr/share
Product:	Gentoo Linux	Reporter:	Diego Elio Pettenò (RETIRED) <flameeyes>
Component:	New packages	Assignee:	Andrey Kislyuk (RETIRED) <weaver>
Status:	RESOLVED FIXED
Severity:	normal	CC:	sci-biology
Priority:	High
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---

Description Diego Elio Pettenò (RETIRED) gentoo-dev

2009-12-19 16:25:26 UTC

TYPE   FILE 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Riken.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.NStart.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Transcript.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.FrameShift.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Tester.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.PepSignal.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Homology.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.NG2.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Est.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.MarkovIMM.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.MarkovProt.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Plotter.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.GSplicer.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.IfElse.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.SpliceWAM.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.QualData.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.GCPlot.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.BlastX.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.GFF.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.PatConst.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.StartWAM.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.AnnotaStruct.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.MarkovConst.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.NStretch.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.SMachine.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.EuStop.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.Repeat.so 
ET_DYN /var/tmp/portage/sci-biology/eugene-3.5g/image//usr/share/eugene/plugins/Sensor.SPred.so

Comment 1 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-09-10 16:37:19 UTC

+*eugene-3.6-r1 (10 Sep 2010)
+
+  10 Sep 2010; Kacper Kowalik <xarthisius@gentoo.org> -eugene-3.6.ebuild,
+  +eugene-3.6-r1.ebuild, +files/eugene-3.6-overflow.patch,
+  +files/eugene-3.6-plugins.patch:
+  Fix overflows wrt bug 336604 and install path wrt bug 297536. Thanks to
+  Diego for the reports.
+