Bug 279160 – sci-libs/openfoam-kernel fails to build with gcc-4.4

• Product: Gentoo Linux
• Status: RESOLVED FIXED

[Description Diego Elio Pettenò (RETIRED) 2009-07-26 12:21:43 UTC]

Portage 2.1.6.13 (!../var/cache/portage/tree/profiles/default/linux/x86/2008.0, gcc-4.4.1-asneeded, glibc-2.10.1-r0, 2.6.30-gentoo-r4 i686)
=================================================================
System uname: Linux-2.6.30-gentoo-r4-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.1
Timestamp of tree: Sat, 25 Jul 2009 11:30:01 +0000
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p28
dev-java/java-config: 1.3.7-r1, 2.1.8-r1
dev-lang/python:     2.6.2-r1
dev-python/pycrypto: 2.0.1-r8
dev-util/ccache:     2.4-r8
dev-util/cmake:      2.6.4-r1
sys-apps/baselayout: 2.0.1
sys-apps/openrc:     0.4.3-r3
sys-apps/sandbox:    2.0
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11
sys-devel/binutils:  2.19.1-r1
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6a
virtual/os-headers:  2.6.30
ACCEPT_KEYWORDS="x86 ~x86"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /opt/glftpd/etc /opt/glftpd/ftp-data /opt/openfire/resources/security/ /opt/openjms/config /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/lib/ccs/conf /usr/lib/fax /usr/share/bufrtables /usr/share/config /var/bind /var/lib/hsqldb /var/phxd /var/qmail/alias /var/qmail/control /var/spool/fax/etc /var/spool/torque /var/vpopmail/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-O2 -pipe"
DISTDIR="/var/cache/distfiles"
FEATURES="ccache distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict test test-fail-continue unmerge-orphans userfetch"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo"
INSTALL_MASK="  /usr/share/doc  /usr/share/man  /usr/share/info"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j14"
PKGDIR="/var/spool/portage/packages"
PORTAGE_COMPRESS=""
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/var/cache/portage/tree-tinderbox"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="acl berkdb bzip2 cli cracklib crypt cups dri fortran gdbm gpm iconv ipv6 isdnlog java5 java6 midi mudflap ncurses nls nostatic nptl nptlonly openmp pam pcre perl pppd python qt3support readline reflection ruby session spl ssl sysfs tcpd unicode x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY

[Comment 1 Diego Elio Pettenò (RETIRED) 2009-07-26 12:32:35 UTC]

Created attachment 199217 [details]
Build log

[Comment 2 Oliver Borm 2009-07-26 12:57:08 UTC]

Yes, I think that this is a gcc-4.4 problem, as I have compiled openfoam with gcc-4.3.2 without problems.

This problem is maybe already resolved in the current git version:
http://repo.or.cz/w/OpenFOAM-1.5.x.git

or svn version:
http://openfoam-extend.svn.sourceforge.net/viewvc/openfoam-extend/trunk/Core/OpenFOAM-1.5-dev/

or it will be resolved if openSUSE-11.2 with gcc-4.4 will be released, as upstream uses openSUSE.

[Comment 3 Samuli Suominen (RETIRED) 2009-08-10 14:08:58 UTC]

Looks like a simple missing <stdint.h>, why hasn't this been fixed?

[Comment 4 Dominik Kapusta (RETIRED) 2009-08-13 17:39:01 UTC]

Created attachment 201161 [details, diff]
Patch solving compilation errors with gcc-4.4/glibc-2.10

There was one more issue apart from stdint.h. The attached patch solves both of them :)

[Comment 5 Samuli Suominen (RETIRED) 2009-08-14 12:33:20 UTC]

+  14 Aug 2009; Samuli Suominen <[e-mail]>
+  openfoam-kernel-1.5_p20090311.ebuild,
+  +files/openfoam-kernel-1.5_p20090311-gcc44.patch:
+  Fix building with GCC 4.4+ wrt #279160, thanks to Dominik Kapusta for
+  patch.

Oliver wins the ticket to contact upstream.