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Bug 257037

Summary: app-admin/webapp-config-1.50.16-r1 - unmerging www-apps/joomla-1.5.7 results in removal of www-apps/joomla-1.5.8 from web root
Product: Gentoo Linux Reporter: Paul McDermott <pmcdermott98>
Component: Current packagesAssignee: Gentoo Web Application Packages Maintainers <web-apps>
Status: RESOLVED WORKSFORME    
Severity: major CC: fauli, proxy-maint
Priority: High    
Version: unspecified   
Hardware: x86   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---

Description Paul McDermott 2009-01-31 02:51:33 UTC
emerge --prune suggested that joomla-1.5.7 would be removed, joomla-1.5.8 would be preserved. But actual execution removed joomla-1.5.8, hosing web site.

Reproducible: Didn't try

Steps to Reproduce:
1.emerge -auv =www-apps/joomla-1.5.7
2.emerge -auv =www-apps/joomla-1.5.8
3.emerge --prune

Actual Results:  
Operational website removed, despite joomla-1.5.8 being installed.

I don't fully understand webapp-config, but this is not what I expected.

Expected Results:  
Removed remains of joomla-1.5.7 from webapp-config directory, but working site still around, as upgraded to joomla-1.5.8

Log from prune:

 www-apps/joomla
    selected: 1.5.7 
   protected: none 
     omitted: 1.5.8 

 perl-core/ExtUtils-CBuilder
    selected: 0.23 
   protected: none 
     omitted: none 

 perl-core/IO-Compress-Base
    selected: 2.015 
   protected: none 
     omitted: none 

 perl-core/Compress-Raw-Zlib
    selected: 2.015 
   protected: none 
     omitted: none 

 dev-java/tomcat-servlet-api
    selected: 5.5.27 
   protected: none 
     omitted: 3 4.1.36 6.0.18 

 dev-util/unifdef
    selected: 1.20 
   protected: none 
     omitted: none 

 app-crypt/opencdk
    selected: 0.6.6 
   protected: none 
     omitted: none 

 dev-perl/IO-String
    selected: 1.08 
   protected: none 
     omitted: none 

 perl-core/Package-Constants
    selected: 0.01 
   protected: none 
     omitted: none 

 dev-java/mx4j-core
    selected: 3.0.1 
   protected: none 
     omitted: none 

>>> 'Selected' packages are slated for removal.
>>> 'Protected' and 'omitted' packages will not be removed.

>>> Waiting 5 seconds before starting...
>>> (Control-C to abort)...
>>> Unmerging in: 5 4 3 2 1 
>>> Unmerging perl-core/Archive-Tar-1.40...
>>> Unmerging dev-java/commons-launcher-1.1-r1...
>>> Unmerging dev-java/commons-httpclient-2.0.2-r1...
>>> Unmerging perl-core/IO-Zlib-1.09...
>>> Unmerging perl-core/ExtUtils-ParseXS-2.19...
>>> Unmerging perl-core/Compress-Zlib-2.015...
>>> Unmerging perl-core/IO-Compress-Zlib-2.015...
>>> Unmerging perl-core/Module-Build-0.28.08...
>>> Unmerging dev-java/commons-modeler-2.0...
>>> Unmerging www-apps/joomla-1.5.7...
* Removing joomla-1.5.8 from /var/www/localhost/htdocs/joomla
*   Installed by root on 2009-01-18 18:56:22
*   Config files owned by 0:0
!found installation/template/images/j_header_right_rtl.png
!found installation/template/images/j_button1_collate.png
!found installation/template/images/j_button1_refresh.png
!found installation/template/images/j_header_left_rtl.png
!found installation/includes/xajax/xajaxResponse.inc.php
!found installation/template/images/j_button1_admin.png
!found installation/template/images/j_button1_right.png
!found installation/template/images/j_header_middle.png

emerge --info:

server lib # emerge --info
Portage 2.1.6.4 (default/linux/x86/2008.0/server, gcc-4.1.2, glibc-2.6.1-r0, 2.6.22-hardened-r8 i686)
=================================================================
System uname: Linux-2.6.22-hardened-r8-i686-Intel-R-_Celeron-TM-_CPU_1300MHz-with-glibc2.0
Timestamp of tree: Sat, 24 Jan 2009 03:15:01 +0000
distcc 2.18.3 i686-pc-linux-gnu (protocols 1 and 2) (default port 3632) [enabled]
ccache version 2.4 [enabled]
app-shells/bash:     3.2_p39
dev-java/java-config: 1.3.7, 2.1.6
dev-lang/python:     2.5.2-r7
dev-util/ccache:     2.4-r7
sys-apps/baselayout: 1.12.11.1
sys-apps/sandbox:    1.2.18.1-r2
sys-devel/autoconf:  2.63
sys-devel/automake:  1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc-config: 1.4.0-r4
sys-devel/libtool:   1.5.26
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="x86"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=pentium3 -fomit-frame-pointer -pipe -fomit-frame-pointer"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/udev/rules.d"
CXXFLAGS="-O2 -march=pentium3 -fomit-frame-pointer -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig ccache distcc distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch"
GENTOO_MIRRORS="http://ftp.snt.utwente.nl/pub/os/linux/gentoo http://www.gigaload.org/gentoo.org/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/"
LANG="en_GB.utf8"
LDFLAGS="-Wl,-O1"
LINGUAS="en_GB"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="acl acpi apache2 bash-completion bzip2 bzlib cli cracklib crypt ctype dba dovecot-sasl dri evo fam fortran gpm iconv imap isdnlog java5 libwww logrotate maildir mailwrapper midi mmx mudflap mysql ncurses nls nptl nptlonly openmp pam pcre perl ppds pppd python readline reflection sasl session spl ssl sysfs syslog tcpd threads unicode userlocales vim vim-syntax x86 xml xmlrpc xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en_GB" USERLAND="GNU" VIDEO_CARDS="fbdev glint i810 intel mach64 mga neomagic nv r128 radeon savage sis tdfx trident vesa vga via vmware voodoo"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Paul McDermott 2009-01-31 03:08:50 UTC
Only joomla-1.5.8 is installed:

server lib # eix joomla
[U] www-apps/joomla
     Available versions:  
        (1.5.8) {M}(~)1.5.8
        (1.5.9) {M}(~)1.5.9!m[1]
        {vhosts}
     Installed versions:  1.5.8(1.5.8)(18:51:54 18/01/09)(-vhosts)
     Homepage:            http://www.joomla.org/
     Description:         Joomla is a powerful Open Source Content Management System.

[1] /usr/local/portage


But webapp-config thinks joomla-1.5.7 is installed on /var/www/localhost/htdocs:

server lib # webapp-config -I joomla 1.5.8
* Fatal error: Package joomla-1.5.7 is already installed here.
* Fatal error: Use webapp-config -C to uninstall it first.
* Fatal error: Install directory already contains a web application!
* Fatal error(s) - aborting

The following appeared to resolved:
webapp-config -C -d joomla joomla 1.5.7 
webapp-config -I -d joomla joomla 1.5.8

I believe emerge -auv =www-apps/joomla-1.5.8 should have taken care of this automatically
Comment 2 Jeroen Roovers (RETIRED) gentoo-dev 2009-01-31 14:50:54 UTC
I assume that's app-admin/webapp-config-1.50.16-r1.
Comment 3 Christian Faulhammer (RETIRED) gentoo-dev 2009-07-23 09:30:00 UTC
Can you retry with -r3 of webapp-config?
Comment 4 Paul McDermott 2009-07-23 21:00:27 UTC
Believe it was app-admin/webapp-config-1.50.16-r1 (sorry for not replying to this point earlier).

Bit reluctant to experiment with -r3 given what happened before. I don't have a backup site/machine that I can use for testing. Can any other watchers help?
Comment 5 Anthony Basile gentoo-dev 2013-08-03 14:53:59 UTC
(In reply to Paul from comment #4)
> Believe it was app-admin/webapp-config-1.50.16-r1 (sorry for not replying to
> this point earlier).
> 
> Bit reluctant to experiment with -r3 given what happened before. I don't
> have a backup site/machine that I can use for testing. Can any other
> watchers help?

I'm not able to reproduce this.  Can you reopen if its still an issue.  Of course, I used the latest verions of joomla in the tree 1.5.25 and 1.7.3

 www-apps/joomla
    selected: 1.5.25 
   protected: none 
     omitted: 1.7.3