Bug 101250 – During Initial Emerge System, error while emerging portage referring to overwrite files it isn't supposed to.

• Product: Gentoo/Alt
• Status: RESOLVED INVALID

[Description Adam Koblentz 2005-08-03 13:32:06 UTC]

When trying to do the initial emerge system, portage doesn't get installed and
an error is the output because it says that portage is trying to overwrite files
that don't belong to it.

Reproducible: Always
Steps to Reproduce:
1.just run emerge system

Actual Results:  
236:/Users/adam root# emerge system            
Calculating system dependencies ...done!
>>> emerge (1 of 4) sys-apps/portage-2.0.51.22-r2 to /
>>> md5 files   ;-) ChangeLog
>>> md5 files   ;-) metadata.xml
>>> md5 files   ;-) portage-2.0.51.19.ebuild
>>> md5 files   ;-) portage-2.0.51.22-r2.ebuild
>>> md5 files   ;-) files/05portage.envd
>>> md5 files   ;-) files/2.0.51.22-fixes.patch
>>> md5 files   ;-) files/digest-portage-2.0.51.19
>>> md5 files   ;-) files/digest-portage-2.0.51.22-r2
>>> md5 files   ;-) files/README.RESCUE
>>> md5 src_uri ;-) portage-2.0.51.22.tar.bz2
>>> Unpacking source...
>>> Unpacking portage-2.0.51.22.tar.bz2 to /var/tmp/portage/portage-2.0.51.22-/work
patching file ChangeLog
patching file bin/ebuild.sh
patching file bin/emake
patching file bin/emerge
patching file bin/repoman
patching file pym/portage.py
>>> Source unpacked.
Listing /var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/cvsee.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/dcdlog.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/distch_conf.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/emeehelp.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/getnpkg.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/outt.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_checksum.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_const.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_contents.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_data.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_db_anydbm.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_db_cpickle.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_db_flat.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_db_template.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_db_test.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_dep.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_exception.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_exec.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_file.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_gpg.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_localization.py
...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_locks.py ...
Compiling
/var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/porge_util.py ...
Compiling /var/tmp/portage/portage-2.0.51.22-r2/work/portage-2.0.51.22/pym/xpapy ...
ppc-macos
>>> Test phase [not enabled]: sys-apps/portage-2.0.51.22-r2

>>> Install portage-2.0.51.22-r2 into /var/tmp/portage/portage-2.0.51.22-r2/ime/
category sys-apps
ppc-macos
strip: can't process non-object and non-archive file:
/private/var/tmp/portageortage-2.0.51.22-r2/work/portage-2.0.51.22/bin/tbz2tool
man:
prepallstrip:
strip: 
strip: 
>>> Completed installing into /var/tmp/portage/portage-2.0.51.22-r2/image/

* checking 141 files for package collisions
existing file /usr/lib/portage/pym/cvstree.pyo is not owned by this package
existing file /usr/lib/portage/pym/emergehelp.pyo is not owned by this
packageexisting file /usr/lib/portage/pym/getbinpkg.pyo is not owned by this package
existing file /usr/lib/portage/pym/output.pyo is not owned by this package
existing file /usr/lib/portage/pym/portage.pyo is not owned by this package
existing file /usr/lib/portage/pym/portage_checksum.pyo is not owned by this pkage
existing file /usr/lib/portage/pym/portage_const.pyo is not owned by this packe
existing file /usr/lib/portage/pym/portage_data.pyo is not owned by this
packaexisting file /usr/lib/portage/pym/portage_db_cpickle.pyo is not owned by
thisackage
existing file /usr/lib/portage/pym/portage_db_flat.pyo is not owned by this paage
existing file /usr/lib/portage/pym/portage_db_template.pyo is not owned by
thipackage
existing file /usr/lib/portage/pym/portage_dep.pyo is not owned by this
packagexisting file /usr/lib/portage/pym/portage_exception.pyo is not owned by
this ckage
existing file /usr/lib/portage/pym/portage_exec.pyo is not owned by this
packaexisting file /usr/lib/portage/pym/portage_file.pyo is not owned by this
packaexisting file /usr/lib/portage/pym/portage_gpg.pyo is not owned by this
packagexisting file /usr/lib/portage/pym/portage_localization.pyo is not owned
by th package
existing file /usr/lib/portage/pym/portage_locks.pyo is not owned by this packe
existing file /usr/lib/portage/pym/portage_util.pyo is not owned by this
packaexisting file /usr/lib/portage/pym/xpak.pyo is not owned by this package
* spend 0.127689838409 seconds checking for file collisions
* This package is blocked because it wants to overwrite
* files belonging to other packages (see messages above).
* If you have no clue what this is all about report it 
* as a bug for this package on http://bugs.gentoo.org

package sys-apps/portage-2.0.51.22-r2 NOT merged

No package files given... Grabbing a set.
236:/Users/adam root#         

Expected Results:  
For portage to continue after updating itself and then continuing to install the
base system.

236:/Users/adam root# emerge info
!!! Relying on the shell to locate gcc, this may break
!!! DISTCC, installing gcc-config and setting your current gcc
!!! profile will fix this
Portage 2.0.51-r3 (default-darwin/macos/10.4, gcc-4.0.0, unavailable, 8.2.1
Power Macintosh)
=================================================================
System uname: 8.2.1 Power Macintosh powerpc
macos-20041118
distcc 2.0.1-zeroconf powerpc-apple-darwin7.0 (protocol 1) (default port 3632)
[disabled]
Autoconf: 
Automake: 
Binutils: 
Headers:  
Libtools: 
ACCEPT_KEYWORDS="ppc-macos"
AUTOCLEAN="yes"
CFLAGS="-O2 -pipe"
CHOST="powerpc-apple-darwin"
COMPILER=""
CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3/share/config
/usr/share/config /var/qmail/control"
CONFIG_PROTECT_MASK="/etc/gconf /etc/env.d"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoaddcvs autoconfig ccache collision-protect distlocks sfperms strict"
GENTOO_MIRRORS="http://gentoo.osuosl.org
http://distro.ibiblio.org/pub/Linux/distributions/gentoo"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="emboss ppc-macos userland_BSD kernel_Darwin elibc_Darwin"

236:/Users/adam root#

[Comment 1 Lina Pezzella (RETIRED) 2005-08-03 13:46:58 UTC]

This is a known bug with the installer. This one time only do: FEATURES="-collision-protect" emerge 
portage