* Package: sci-libs/atlas-3.10.2:0 * Repository: gentoo * Maintainer: sci@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc fortran kernel_linux lapack threads * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking atlas3.10.2.tar.bz2 to /var/tmp/portage/sci-libs/atlas-3.10.2/work >>> Unpacking lapack-3.6.0.tgz to /var/tmp/portage/sci-libs/atlas-3.10.2/work >>> Source unpacked in /var/tmp/portage/sci-libs/atlas-3.10.2/work >>> Preparing source in /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS ... * Applying atlas-3.10.2-x32-support.patch ... patching file CONFIG/src/SpewMakeInc.c Hunk #1 succeeded at 377 (offset 7 lines). Hunk #2 succeeded at 425 with fuzz 2 (offset 7 lines). patching file CONFIG/src/gnuccw.c patching file CONFIG/src/gcc3p.c patching file CONFIG/src/gnuf90w.c patching file CONFIG/src/probe_comp.c Hunk #1 succeeded at 618 with fuzz 2 (offset 4 lines). Hunk #2 succeeded at 1911 (offset 218 lines). patching file CONFIG/src/config.c Hunk #2 succeeded at 1270 (offset -2 lines). [ ok ] * Applying atlas-3.10.2-format-security.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS ... x86_64-pc-linux-gnu-gcc -I/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include -g -w -c /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/atlconf_misc.c x86_64-pc-linux-gnu-gcc -I/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include -g -w -o xconfig /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/config.c atlconf_misc.o /usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-libs/atlas-3.10.2/temp/ccwIWkhY.o: in function `ATL_tmpnam': /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/config.c:224:(.text+0x83a): warning: the use of `tmpnam' is dangerous, better use `mkstemp' ./xconfig -d s /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/ -d b /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared -D c -DWALL -C acg 'gcc' -F acg '-march=native -O2 -pipe -fpermissive ' -Ss pmake '$(MAKE) -j56' -t -1 -Si omp 0 -b 64 -C if '/usr/bin/x86_64-pc-linux-gnu-gfortran' -F if '-march=native -O3 -fno-vect-cost-model -pipe' -Si latune 1 -Si lapackref 1 -Fa alg -fPIC /usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: probe_OS.o: in function `ATL_tmpnam': /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_OS.c:224:(.text+0x83a): warning: the use of `tmpnam' is dangerous, better use `mkstemp' OS configured as Linux (1) /usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: probe_asm.o: in function `ATL_tmpnam': /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_asm.c:224:(.text+0x83a): warning: the use of `tmpnam' is dangerous, better use `mkstemp' Assembly configured as GAS_x8664 (2) /usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: probe_vec.o: in function `ATL_tmpnam': /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_vec.c:224:(.text+0x83a): warning: the use of `tmpnam' is dangerous, better use `mkstemp' Vector ISA Extension configured as AVXMAC (3,488) /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c: In function ‘ConfirmPtrbits’: /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:201:33: error: passing argument 1 of â€-Wincompatible-pointer-types][]] 201 | i = 1 + strlen(frm) + strlen(osnam) + strlen(osnam[OS]) + | ^~~~~ | | | char ** In file included from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include/atlconf.h:6, from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:1: /usr/include/string.h:407:35: note: expected ‘const char *’ but argument is of type ‘char **’ 407 | extern size_t strlen (const char *__s) | ~~~~~~~~~~~~^~~ make: *** [Makefile:93: probe_arch.o] Error 1 Bad MACHTYPE value=0, res='NULL' Architecture configured as UNKNOWN (0) /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c: In function ‘ConfirmPtrbits’: /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:201:33: error: passing argument 1 of â€-Wincompatible-pointer-types][]] 201 | i = 1 + strlen(frm) + strlen(osnam) + strlen(osnam[OS]) + | ^~~~~ | | | char ** In file included from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include/atlconf.h:6, from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:1: /usr/include/string.h:407:35: note: expected ‘const char *’ but argument is of type ‘char **’ 407 | extern size_t strlen (const char *__s) | ~~~~~~~~~~~~^~~ make: *** [Makefile:93: probe_arch.o] Error 1 Bad CPU MHZ value=0, res='NULL' Clock rate configured as 0Mhz /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c: In function ‘ConfirmPtrbits’: /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:201:33: error: passing argument 1 of â€-Wincompatible-pointer-types][]] 201 | i = 1 + strlen(frm) + strlen(osnam) + strlen(osnam[OS]) + | ^~~~~ | | | char ** In file included from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include/atlconf.h:6, from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:1: /usr/include/string.h:407:35: note: expected ‘const char *’ but argument is of type ‘char **’ 407 | extern size_t strlen (const char *__s) | ~~~~~~~~~~~~^~~ make: *** [Makefile:93: probe_arch.o] Error 1 Bad NCPU value=0, res='NULL' Maximum number of threads configured as 0 /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c: In function ‘ConfirmPtrbits’: /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:201:33: error: passing argument 1 of â€-Wincompatible-pointer-types][]] 201 | i = 1 + strlen(frm) + strlen(osnam) + strlen(osnam[OS]) + | ^~~~~ | | | char ** In file included from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include/atlconf.h:6, from /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_arch.c:1: /usr/include/string.h:407:35: note: expected ‘const char *’ but argument is of type ‘char **’ 407 | extern size_t strlen (const char *__s) | ~~~~~~~~~~~~^~~ make: *** [Makefile:93: probe_arch.o] Error 1 Cannot detect CPU throttling. x86_64-pc-linux-gnu-gcc -I/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include -g -w -o xisgcc /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/IsGcc.c atlconf_misc.o /usr/lib/gcc/x86_64-pc-linux-gnu/14/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-libs/atlas-3.10.2/temp/ccE462vQ.o: in function `ATL_tmpnam': /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/IsGcc.c:224:(.text+0x83a): warning: the use of `tmpnam' is dangerous, better use `mkstemp' x86_64-pc-linux-gnu-gcc -I/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/include -g -w -c /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_comp.c /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_comp.c: In function ‘SelectBestGcc’: /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS//CONFIG/src/probe_comp.c:1167:17: error: implicit declaration of function â€-Wimplicit-function-declaration][]] 1167 | if (CompIsMinGW(gccs[i]) || CompIsAppleGcc(gccs[i])) | ^~~~~~~~~~~ make: *** [Makefile:91: probe_comp.o] Error 1 ERROR 512 IN SYSCMND: 'make IRun_comp args="-v 0 -o atlconf.txt -O 1 -A 0 -Si nof77 0 -V 488 -C ic 'gcc' -F ic '-march=native -O2 -pipe -fpermissive ' -Fa ic '-fPIC' -C sm 'gcc' -F sm '-march=native -O2 -pipe -fpermissive ' -Fa sm '-fPIC' -C dm 'gcc' -F dm '-march=native -O2 -pipe -fpermissive ' -Fa dm '-fPIC' -C sk 'gcc' -F sk '-march=native -O2 -pipe -fpermissive ' -Fa sk '-fPIC' -C dk 'gcc' -F dk '-march=native -O2 -pipe -fpermissive ' -Fa dk '-fPIC' -C xc 'gcc' -F xc '-march=native -O2 -pipe -fpermissive ' -Fa xc '-fPIC' -C gc 'gcc' -F gc '-march=native -O2 -pipe -fpermissive ' -Fa gc '-fPIC' -C if '/usr/bin/x86_64-pc-linux-gnu-gfortran' -F if '-march=native -O3 -fno-vect-cost-model -pipe' -Fa if '-fPIC' -b 64"' mkdir src bin tune interfaces cd src ; mkdir testing auxil blas lapack pthreads threads cd src/blas ; \ mkdir f77reference reference gemv ger gemm kbmm \ level1 level2 level3 pklevel3 cd src/blas/reference ; mkdir level1 level2 level3 cd src/blas/level2 ; mkdir kernel cd src/blas/pklevel3 ; mkdir gpmm sprk cd src/blas/level3 ; mkdir rblas kernel cd src/pthreads ; mkdir blas misc cd src/pthreads/blas ; mkdir level1 level2 level3 cd src/threads ; mkdir blas lapack cd src/threads/blas ; mkdir level3 level2 cd tune ; mkdir blas sysinfo lapack threads cd tune/blas ; mkdir gemm gemv ger level1 level3 cd interfaces ; mkdir blas lapack cd interfaces/lapack ; mkdir C F77 cd interfaces/lapack/C ; mkdir src testing cd interfaces/lapack/F77 ; mkdir src testing cd interfaces/blas ; mkdir C F77 cd interfaces/blas/C ; mkdir src testing cd interfaces/blas/F77 ; mkdir src testing cd interfaces/lapack ; mkdir C2F cd interfaces/lapack/C2F ; mkdir src mkdir ARCHS make -f Make.top startup make[1]: Entering directory '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared' Make.top:1: Make.inc: No such file or directory make[1]: *** No rule to make target 'Make.inc'. Stop. make[1]: Leaving directory '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared' make: *** [Makefile:493: startup] Error 2 mv: cannot stat 'lib/Makefile': No such file or directory /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/configure: line 450: lib/Makefile: No such file or directory /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/configure: line 451: lib/Makefile: No such file or directory /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/configure: line 452: lib/Makefile: No such file or directory /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/configure: line 453: lib/Makefile: No such file or directory /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS/configure: line 509: lib/Makefile: No such file or directory DONE configure >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS ... make -j56 -j1 build make -f Make.top build make[1]: Entering directory '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared' Make.top:1: Make.inc: No such file or directory make[1]: *** No rule to make target 'Make.inc'. Stop. make[1]: Leaving directory '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared' make: *** [Makefile:488: build] Error 2 * ERROR: sci-libs/atlas-3.10.2::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-libs/atlas-3.10.2::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/atlas-3.10.2::gentoo'`. * The complete build log is located at '/var/log/portage/sci-libs:atlas-3.10.2:20240430-054816.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/atlas-3.10.2/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS_shared' * S: '/var/tmp/portage/sci-libs/atlas-3.10.2/work/ATLAS'