build.log

build.log (text/plain), 76.69 KB, created by Agostino Sarubbo on 2024-02-16 08:53:53 UTC

 * Package:    sci-biology/unafold-3.8-r1:0
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_musl kernel_linux
 * FEATURES:   network-sandbox preserve-libs sandbox test userpriv usersandbox


@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@
This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix;
This ebuild was merged at the following commit:
https://github.com/gentoo-mirror/gentoo/commit/84835b15c2ff457bd768ffe56329b38353d73563  (Thu Feb 15 21:04:02 UTC 2024)
@@@@@ END @@@@@



##################
# emerge --info: #
##################
Portage 3.0.61 (python 3.12.2-final-0, default/linux/amd64/17.0/musl/hardened, gcc-13, musl-1.2.4-r1, 6.1.66-gentoo-dist x86_64)
=================================================================
System uname: Linux-6.1.66-gentoo-dist-x86_64-AMD_EPYC_7513_32-Core_Processor-with-libc
KiB Mem:   263452516 total,  46020240 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Thu, 15 Feb 2024 21:04:02 +0000
sh bash 5.2_p26
ld GNU ld (Gentoo 2.41 p5) 2.41.0
app-misc/pax-utils:        1.3.7::gentoo
app-shells/bash:           5.2_p26::gentoo
dev-build/autoconf:        2.72-r1::gentoo
dev-build/automake:        1.16.5-r2::gentoo
dev-build/cmake:           3.28.3::gentoo
dev-build/libtool:         2.4.7-r2::gentoo
dev-build/make:            4.4.1-r1::gentoo
dev-build/meson:           1.3.2::gentoo
dev-lang/perl:             5.38.2-r1::gentoo
dev-lang/python:           3.10.13_p3::gentoo, 3.11.8_p1::gentoo, 3.12.2_p1::gentoo
sys-apps/baselayout:       2.14-r2::gentoo
sys-apps/openrc:           0.53::gentoo
sys-apps/sandbox:          2.38::gentoo
sys-devel/binutils:        2.41-r5::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/gcc:             13.2.1_p20240113-r1::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-devel/llvm:            17.0.6::gentoo
sys-kernel/linux-headers:  6.7::gentoo (virtual/os-headers)
sys-libs/musl:             1.2.4-r1::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: True
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts: 
    sync-rsync-verify-max-age: 3

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* unafold"
CBUILD="x86_64-gentoo-linux-musl"
CFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0"
CHOST="x86_64-gentoo-linux-musl"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0"
DISTDIR="/var/tmp/portage/sci-biology/unafold-3.8-r1/distdir"
EMERGE_DEFAULT_OPTS="--complete-graph y --with-bdeps=y -1 -k -b --backtrack=100"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0"
GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.snt.utwente.nl/pub/os/linux/gentoo/ http://ftp.belnet.be/pub/rsync.gentoo.org/gentoo/ http://distfiles.gentoo.org"
INSTALL_MASK="charset.alias /usr/share/locale/locale.alias"
LANG="C.UTF8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0"
LEX="flex"
MAKEOPTS="-j16"
PKGDIR="/root/tbci/binpkg"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="acl amd64 bzip2 cet cli crypt debug dri elogind fortran hardened iconv ipv6 jumbo-build libtirpc native-symlinks ncurses nls openmp pam pcre pic pie readline seccomp split-usr ssl ssp test test-rust unicode xattr xtpax zlib" ABI_X86="64" ELIBC="musl" KERNEL="linux"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS





##############################
# emerge history (qlop -mv): #
##############################
2024-02-15T21:32:09 >>> sys-apps/hwdata-0.376
2024-02-15T21:32:10 >>> sys-devel/llvm-common-17.0.6
2024-02-15T21:32:11 >>> x11-libs/libXrandr-1.5.4
2024-02-15T21:32:12 >>> x11-libs/libXxf86vm-1.1.5
2024-02-15T21:32:14 >>> x11-libs/libXfixes-6.0.1
2024-02-15T21:32:15 >>> media-libs/libglvnd-1.7.0
2024-02-15T21:32:16 >>> media-libs/libjpeg-turbo-3.0.2
2024-02-15T21:32:18 >>> x11-libs/libxshmfence-1.3.2
2024-02-15T21:32:19 >>> x11-libs/xcb-util-keysyms-0.4.1
2024-02-15T21:32:20 >>> sys-libs/binutils-libs-2.41-r5
2024-02-15T21:32:22 >>> dev-python/pygments-2.17.2
2024-02-15T21:32:23 >>> dev-python/mako-1.3.2
2024-02-15T21:32:24 >>> dev-lang/nasm-2.16.01-r1
2024-02-15T21:32:32 >>> x11-libs/libpciaccess-0.18
2024-02-15T21:32:39 >>> x11-libs/libXi-1.8.1
2024-02-15T21:32:41 >>> media-libs/glu-9.0.3
2024-02-15T21:32:49 >>> sys-devel/llvm-17.0.6
2024-02-15T21:32:52 >>> dev-python/docutils-0.20.1-r1
2024-02-15T21:32:56 >>> media-libs/gd-2.3.3-r4
2024-02-15T21:33:05 >>> virtual/glu-9.0-r2
2024-02-15T21:33:11 >>> sys-devel/llvmgold-17
2024-02-15T21:33:14 >>> x11-libs/libdrm-2.4.120
2024-02-15T21:33:20 >>> sys-devel/llvm-toolchain-symlinks-17
2024-02-15T21:33:24 >>> media-libs/mesa-24.0.1
2024-02-15T21:33:29 >>> virtual/opengl-7.0-r2
2024-02-15T21:33:32 >>> media-libs/freeglut-3.4.0
2024-02-15T21:33:36 >>> sci-biology/unafold-3.8-r1




#######################################
# installed packages (qlist -ICvUSS): #
#######################################
acct-group/audio-0-r2:0
acct-group/cdrom-0-r2:0
acct-group/dialout-0-r2:0
acct-group/disk-0-r2:0
acct-group/floppy-0-r1:0
acct-group/input-0-r2:0
acct-group/kmem-0-r2:0
acct-group/kvm-0-r2:0
acct-group/lp-0-r2:0
acct-group/man-0-r2:0
acct-group/messagebus-0-r2:0
acct-group/portage-0-r1:0
acct-group/render-0-r2:0
acct-group/root-0-r1:0
acct-group/sgx-0-r1:0
acct-group/sshd-0-r2:0
acct-group/tape-0-r2:0
acct-group/tty-0-r2:0
acct-group/usb-0-r2:0
acct-group/video-0-r2:0
acct-user/man-1-r2:0
acct-user/messagebus-0-r2:0
acct-user/portage-0-r2:0
acct-user/sshd-0-r2:0
app-admin/eselect-1.4.27-r1:0 -doc -emacs -vim-syntax
app-admin/perl-cleaner-2.31:0 -pkgcore
app-alternatives/awk-4:0 -busybox gawk -mawk -nawk split-usr
app-alternatives/bc-0:0 -gh gnu
app-alternatives/bzip2-1:0 -lbzip2 -pbzip2 reference split-usr
app-alternatives/cpio-0:0 gnu -libarchive split-usr
app-alternatives/gzip-1:0 -pigz reference split-usr
app-alternatives/lex-0-r1:0 flex -reflex
app-alternatives/ninja-1:0 reference -samurai
app-alternatives/sh-0:0 bash -busybox -dash -ksh -lksh -mksh
app-alternatives/tar-0:0 gnu -libarchive split-usr
app-alternatives/yacc-1-r2:0 bison -byacc -reference
app-arch/bzip2-1.0.8-r5:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static -static-libs -verify-sig
app-arch/cpio-2.15:0 nls
app-arch/gzip-1.13:0 pic -static -verify-sig
app-arch/libarchive-3.7.2:0/13 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -blake2 bzip2 e2fsprogs -expat iconv -lz4 lzma -lzo -nettle -static-libs -verify-sig xattr -zstd
app-arch/tar-1.35:0 acl -minimal nls -selinux -verify-sig xattr
app-arch/unzip-6.0_p27-r1:0 bzip2 -natspec unicode
app-arch/xz-utils-5.4.6-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc extra-filters nls -pgo -static-libs -verify-sig
app-arch/zstd-1.5.5-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -lz4 lzma -static-libs -test zlib
app-crypt/gnupg-2.4.4:0 bzip2 -doc -ldap nls readline -selinux smartcard ssl -test tofu -tools -tpm -usb -user-socket -verify-sig -wks-server
app-crypt/gpgme-1.23.2:1/11.6.15.2 -common-lisp cxx debug -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -qt5 -qt6 -static-libs -test -verify-sig
app-crypt/libb2-0.98.1-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -native-cflags openmp -static-libs
app-crypt/libmd-1.1.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
app-crypt/pinentry-1.2.1-r4:0 -X -caps -efl -emacs -gtk -keyring ncurses -qt5 -verify-sig -wayland
app-crypt/rhash-1.4.4-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug nls ssl -static-libs
app-editors/nano-7.2-r1:0 -debug -justify -magic -minimal ncurses nls spell -static unicode
app-eselect/eselect-fontconfig-20220403:0
app-eselect/eselect-iptables-20220320:0
app-eselect/eselect-lib-bin-symlink-0.1.1-r1:0
app-eselect/eselect-pinentry-0.7.3:0
app-misc/ca-certificates-20230311.3.97:0 -cacert
app-misc/editor-wrapper-4-r1:0
app-misc/mime-types-2.1.54:0 -nginx
app-misc/pax-utils-1.3.7:0 -caps -man -python -python_single_target_python3_10 python_single_target_python3_11 -seccomp -test
app-misc/tmux-3.4:0 debug -selinux -systemd -utempter -vim-syntax
app-portage/eix-0.36.7:0 debug -doc nls -sqlite
app-portage/elt-patches-20240213:0
app-portage/gemato-20.5:0 gpg -pretty-log -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -tools
app-portage/gentoolkit-0.6.5:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
app-portage/getuto-1.10.1:0 -test
app-portage/portage-utils-0.96.1:0 openmp qmanifest qtegrity -static
app-shells/bash-5.2_p26:0 -afs -bashlogger -examples -mem-scramble net nls -pgo -plugins readline -verify-sig
app-shells/bash-completion-2.11:0 eselect -test
app-shells/gentoo-bashcomp-20230313:0
app-shells/push-3.4:0
app-shells/quoter-4.2:0
app-text/ansifilter-2.20:0 -gui -verify-sig
app-text/asciidoc-10.2.0:0 -python_single_target_pypy3 -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12
app-text/build-docbook-catalog-2.4:0
app-text/docbook-xml-dtd-4.5-r2:4.5
app-text/docbook-xml-dtd-4.4-r3:4.4
app-text/docbook-xml-dtd-4.2-r3:4.2
app-text/docbook-xml-dtd-4.1.2-r7:4.1.2
app-text/docbook-xsl-ns-stylesheets-1.79.1:0 -ruby
app-text/docbook-xsl-stylesheets-1.79.1-r4:0 -ruby
app-text/manpager-1:0
app-text/sgml-common-0.6.3-r7:0
app-text/xmlto-0.0.28-r11:0 -latex text
dev-build/autoconf-2.72-r1:2.72 -emacs -verify-sig
dev-build/autoconf-archive-2023.02.20:0
dev-build/autoconf-wrapper-20231224:0
dev-build/automake-1.16.5-r2:1.16 -test
dev-build/automake-wrapper-20221207:0
dev-build/cmake-3.28.3:0 -dap -doc -gui ncurses -qt6 -test -test -verify-sig
dev-build/gtk-doc-am-1.33.2:0
dev-build/libtool-2.4.7-r2:2 -vanilla
dev-build/make-4.4.1-r1:0 -guile nls -static -verify-sig
dev-build/meson-1.3.2:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -verify-sig
dev-build/meson-format-array-0:0 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
dev-build/ninja-1.11.1-r5:0 -doc -test
dev-db/sqlite-3.45.1-r1:3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc -icu readline -secure-delete -static-libs -tcl -test -tools
dev-lang/nasm-2.16.01-r1:0 -doc
dev-lang/perl-5.38.2-r1:0/5.38 -berkdb debug -doc -gdbm ithreads -minimal -quadmath
dev-lang/python-3.12.2_p1:3.12 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig
dev-lang/python-3.11.8_p1:3.11 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig
dev-lang/python-3.10.13_p3:3.10 -bluetooth -build debug ensurepip -examples gdbm -libedit ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig
dev-lang/python-exec-2.4.10:2 native-symlinks python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-lang/python-exec-conf-2.4.6:2 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
dev-lang/tcl-8.6.13-r1:0/8.6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug threads
dev-libs/boehm-gc-8.2.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cxx large -static-libs threads
dev-libs/elfutils-0.190:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -debuginfod -lzma nls -static-libs -test utils -verify-sig -zstd
dev-libs/expat-2.6.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples -static-libs -test unicode
dev-libs/glib-2.78.4-r1:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dbus debug elf -gtk-doc mime -selinux -static-libs -sysprof -systemtap -test -utils xattr
dev-libs/gmp-6.3.0-r1:0/10.4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cpudetection cxx -doc pic -static-libs
dev-libs/gobject-introspection-1.78.1:0 -doctool -gtk-doc -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 -test
dev-libs/gobject-introspection-common-1.78.1:0
dev-libs/isl-0.24-r2:0/23 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/jsoncpp-1.9.5:0/25 -doc -test
dev-libs/libassuan-2.5.6:0 -verify-sig
dev-libs/libatomic_ops-7.8.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
dev-libs/libbsd-0.11.8:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -verify-sig
dev-libs/libevent-2.1.12-r1:0/2.1-7 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 clock-gettime debug -malloc-replacement ssl -static-libs -test -verbose-debug -verify-sig
dev-libs/libffi-3.4.5:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -exec-static-trampoline -pax-kernel -static-libs -test
dev-libs/libgcrypt-1.10.3-r1:0/20 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_aes -cpu_flags_arm_neon -cpu_flags_arm_sha1 -cpu_flags_arm_sha2 -cpu_flags_ppc_altivec -cpu_flags_ppc_vsx2 -cpu_flags_ppc_vsx3 cpu_flags_x86_aes cpu_flags_x86_avx cpu_flags_x86_avx2 -cpu_flags_x86_padlock -cpu_flags_x86_sha cpu_flags_x86_sse4_1 -doc getentropy -static-libs -verify-sig
dev-libs/libgpg-error-1.47-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -common-lisp nls -static-libs -test -verify-sig
dev-libs/libksba-1.6.5:0 -static-libs -verify-sig
dev-libs/libpcre2-10.42-r2:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -jit -libedit pcre16 pcre32 readline -static-libs unicode -valgrind -verify-sig zlib
dev-libs/libpipeline-1.5.7:0 -test
dev-libs/libtasn1-4.19.0:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -test -verify-sig
dev-libs/libunistring-1.1-r1:0/5 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -static-libs
dev-libs/libuv-1.48.0:0/1
dev-libs/libxml2-2.12.5:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -examples ftp -icu -lzma python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 readline -static-libs -test
dev-libs/libxslt-1.1.39:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 crypt debug -examples -python python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -static-libs
dev-libs/lzo-2.10:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples split-usr -static-libs
dev-libs/mpc-1.3.1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/mpfr-4.2.1:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -verify-sig
dev-libs/nettle-3.9.1:0/8-6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_aes -cpu_flags_arm_neon -cpu_flags_arm_sha1 -cpu_flags_arm_sha2 -cpu_flags_ppc_altivec -cpu_flags_ppc_vsx2 -cpu_flags_ppc_vsx3 cpu_flags_x86_aes cpu_flags_x86_pclmul -cpu_flags_x86_sha -doc gmp -static-libs -verify-sig
dev-libs/npth-1.6-r2:0 -test
dev-libs/openssl-3.2.1-r1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cpu_flags_x86_sse2 -fips -ktls -rfc3779 -sctp -static-libs -test -tls-compression -vanilla -verify-sig -verify-sig -weak-ssl-ciphers
dev-libs/popt-1.19-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs
dev-perl/Encode-Locale-1.50.0-r1:0 -test
dev-perl/File-BaseDir-0.90.0:0 -test
dev-perl/File-DesktopEntry-0.220.0-r1:0 -test
dev-perl/File-MimeInfo-0.330.0:0 -test
dev-perl/IO-Socket-SSL-2.85.0:0 -examples -idn -test
dev-perl/IPC-System-Simple-1.300.0:0 -test
dev-perl/Locale-gettext-1.70.0-r1:0 -test
dev-perl/Mozilla-CA-20999999-r1:0 -test
dev-perl/Net-SSLeay-1.940.0:0 -examples -examples -minimal -test
dev-perl/Regexp-IPv6-0.30.0-r2:0 -test
dev-perl/URI-5.210.0:0 -test
dev-python/certifi-3021.3.16-r4:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/charset-normalizer-3.3.2:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/cython-3.0.8:0 debug -doc -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/docutils-0.20.1-r1:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
dev-python/editables-0.5:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/ensurepip-pip-24.0:0
dev-python/ensurepip-setuptools-69.1.0:0
dev-python/ensurepip-wheels-100:0
dev-python/flit-core-3.9.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/gentoo-common-1:0
dev-python/gpep517-15:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/hatchling-1.21.1:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/idna-3.6:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/installer-0.7.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/jaraco-context-4.3.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/jaraco-functools-4.0.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/jaraco-text-3.12.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/jinja-3.1.3:0 -doc -examples -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/lxml-5.1.0:0 debug -doc -examples -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test threads
dev-python/mako-1.3.2:0 -doc -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/markupsafe-2.1.5:0 debug -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/more-itertools-10.2.0:0 -doc -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/nspektr-0.5.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/ordered-set-4.1.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/packaging-23.2-r1:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/pathspec-0.12.1:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/platformdirs-4.2.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/pluggy-1.4.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/pygments-2.17.2:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/pypax-0.9.5-r1:0 debug -ptpax python_targets_python3_10 python_targets_python3_11 xtpax
dev-python/PySocks-1.7.1-r2:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
dev-python/requests-2.31.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -socks5 -test test-rust
dev-python/setuptools-69.1.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/setuptools-scm-8.0.4:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/tomli-2.0.1-r1:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/trove-classifiers-2024.1.31:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/typing-extensions-4.9.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-python/urllib3-2.2.0:0 -brotli -http2 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test -zstd
dev-python/wheel-0.42.0:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 -test
dev-util/checkbashisms-2.23.5:0
dev-util/desktop-file-utils-0.27-r1:0
dev-util/glib-utils-2.78.4:0 -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12
dev-util/gperf-3.1-r2:0
dev-util/pkgconf-2.1.1:0/4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -test
dev-util/re2c-3.1:0 debug -test
dev-vcs/git-2.43.1:0 blksha1 -cgi curl -cvs -doc gpg -highlight iconv -keyring -mediawiki nls pcre -perforce -perl -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 safe-directory -selinux -subversion -test -tk webdav -xinetd
media-fonts/liberation-fonts-2.1.5:0 -X -X -fontforge
media-gfx/graphite2-1.3.14_p20210810-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -perl -test
media-libs/fontconfig-2.15.0:1.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc nls -test
media-libs/freeglut-3.4.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
media-libs/freetype-2.13.2:2 -X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 adobe-cff -brotli bzip2 cleartype-hinting debug -doc -fontforge harfbuzz png -static-libs -svg -utils
media-libs/gd-2.3.3-r4:2/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -avif cpu_flags_x86_sse -fontconfig -heif jpeg png -static-libs -test -tiff -truetype -webp -xpm zlib
media-libs/glu-9.0.3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
media-libs/harfbuzz-8.3.0:0/6.0.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cairo debug -doc -experimental glib graphite -icu introspection -test truetype
media-libs/libglvnd-1.7.0:0 X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -test
media-libs/libjpeg-turbo-3.0.2:0/0.2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_neon -java -java -static-libs
media-libs/libpng-1.6.42:0/16 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -apng -cpu_flags_arm_neon cpu_flags_x86_sse -static-libs -test
media-libs/mesa-24.0.1:0 X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cpu_flags_x86_sse2 -d3d9 debug -gles1 gles2 llvm -llvm_slot_15 -llvm_slot_16 llvm_slot_17 -lm-sensors -opencl opengl -osmesa proprietary-codecs -selinux -test -unwind -vaapi -valgrind -vdpau -video_cards_d3d12 -video_cards_freedreno video_cards_intel -video_cards_lavapipe -video_cards_lima video_cards_nouveau -video_cards_panfrost -video_cards_r300 -video_cards_r600 video_cards_radeon video_cards_radeonsi -video_cards_v3d -video_cards_vc4 -video_cards_virgl -video_cards_vivante -video_cards_vmware -vulkan -vulkan-overlay -wayland -xa -zink zstd
net-dns/c-ares-1.26.0:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -test -verify-sig
net-dns/libidn2-2.3.7:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs -verify-sig
net-firewall/iptables-1.8.10:0/1.8.3 -conntrack -netlink -nftables -pcap split-usr -static-libs -test
net-libs/gnutls-3.8.3:0/30.30 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -brotli cxx -dane -doc -examples idn nls openssl -pkcs11 seccomp -sslv2 -sslv3 -static-libs -test -test-full tls-heartbeat -tools -verify-sig zlib -zstd
net-libs/libmnl-1.0.5:0/0.2.0 -examples -verify-sig
net-libs/libpsl-0.21.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -icu idn -test
net-libs/nghttp2-1.59.0:0/1.14 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -hpack-tools -jemalloc -static-libs -systemd -test -utils -xml
net-misc/curl-8.6.0-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 adns alt-svc -brotli -curl_ssl_gnutls -curl_ssl_mbedtls curl_ssl_openssl -curl_ssl_rustls ftp -gnutls -gopher hsts http2 -idn imap -kerberos -ldap -mbedtls -nghttp3 openssl pop3 progress-meter psl -rtmp -rustls -samba smtp -ssh ssl -sslv3 -static-libs -telnet -test tftp -verify-sig -websockets -zstd
net-misc/dhcpcd-10.0.6-r1:0 debug embedded ipv6 -privsep udev
net-misc/iputils-20240117:0 arping -caps -clockdiff -doc filecaps -idn nls -test -tracepath
net-misc/netifrc-0.7.8:0 dhcp
net-misc/openssh-contrib-9.6_p1:0 -X -X509 -abi_mips_n32 -audit debug -hpn -kerberos -ldns -libedit -livecd pam pie -security-key -selinux ssl -static -test -verify-sig -xmss
net-misc/rsync-3.2.7-r4:0 acl -examples iconv -lz4 -python_single_target_python3_10 python_single_target_python3_11 -rrsync ssl -stunnel -system-zlib -verify-sig xattr -xxhash -zstd
net-misc/wget-1.21.4:0 -cookie-check debug -gnutls -idn ipv6 -metalink nls -ntlm pcre ssl -static -test -uuid -verify-sig zlib
perl-core/File-Temp-0.231.100:0
perl-core/Math-BigInt-1.999.842:0 -examples -test
sci-biology/unafold-3.8-r1:0
sec-keys/openpgp-keys-gentoo-release-20230329:0 -test
sys-apps/acl-2.3.2-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs
sys-apps/attr-2.5.2-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug nls -static-libs
sys-apps/baselayout-2.14-r2:0 -build split-usr
sys-apps/coreutils-9.4-r1:0 acl -caps -gmp -hostname -kill -multicall nls openssl -selinux split-usr -static -test -vanilla -verify-sig xattr
sys-apps/dbus-1.15.8:0 -X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc elogind -selinux -static-libs -systemd -test -test -valgrind
sys-apps/diffutils-3.10:0 nls -verify-sig
sys-apps/elfix-0.9.5:0 -ptpax -test xtpax
sys-apps/file-5.45-r4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -lzip -lzma -python python_targets_python3_10 python_targets_python3_11 -seccomp -static-libs -verify-sig zlib -zstd
sys-apps/findutils-4.9.0-r2:0 nls -selinux -static -test -verify-sig
sys-apps/gawk-5.3.0-r1:0 -mpfr nls -pma readline -verify-sig
sys-apps/gentoo-functions-0.19:0
sys-apps/grep-3.11:0 egrep-fgrep nls pcre -static -verify-sig
sys-apps/groff-1.23.0:0 -X -examples -uchardet
sys-apps/help2man-1.49.3:0 nls
sys-apps/hwdata-0.376:0
sys-apps/install-xattr-0.8-r1:0
sys-apps/iproute2-6.6.0-r3:0 -atm -berkdb -bpf -caps -elf iptables -minimal -nfs -selinux
sys-apps/kbd-2.6.4:0 nls pam -selinux -test
sys-apps/kmod-31:0 debug -doc lzma -pkcs7 -python python_targets_python3_10 python_targets_python3_11 -static-libs tools zlib zstd
sys-apps/less-643-r1:0 pcre -test
sys-apps/man-db-2.12.0:0 manpager -nls seccomp -selinux -static-libs zlib
sys-apps/miscfiles-1.5-r4:0 -minimal
sys-apps/net-tools-2.10:0 arp hostname ipv6 -nis nls -plipconfig -selinux -slattach -static
sys-apps/openrc-0.53:0 -audit -bash debug ncurses netifrc -newnet pam -s6 -selinux -sysv-utils sysvinit unicode
sys-apps/portage-3.0.61-r1:0 -apidoc -build -doc -gentoo-dev ipc native-extensions -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 rsync-verify -selinux -test xattr
sys-apps/sandbox-2.38:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nnp
sys-apps/sed-4.9:0 acl nls -selinux -static -verify-sig
sys-apps/shadow-4.14.5:0/4 acl -audit -cracklib nls pam -selinux -skey split-usr -su -systemd -verify-sig xattr
sys-apps/systemd-utils-254.9-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -boot -kernel-install kmod -python_single_target_python3_10 python_single_target_python3_11 -python_single_target_python3_12 -secureboot -selinux split-usr -sysusers -test tmpfiles udev -ukify
sys-apps/sysvinit-3.08:0 -ibm -nls -selinux -static -verify-sig
sys-apps/texinfo-7.1-r1:0 nls standalone -static
sys-apps/util-linux-2.39.3-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit -build -caps cramfs -cryptsetup -fdformat hardlink -kill logger -magic ncurses -nls pam -python python_targets_python3_10 python_targets_python3_11 readline -rtas -selinux -slang -static-libs su suid -systemd -test -tty-helpers -udev unicode -verify-sig
sys-apps/which-2.21:0
sys-auth/elogind-252.9:0 acl -audit cgroup-hybrid debug -doc pam -policykit -selinux -test
sys-auth/pambase-20240128:0 -caps -debug elogind -gnome-keyring -homed -minimal -mktemp nullok -pam_krb5 -pam_ssh passwdqc -pwhistory -pwquality -securetty -selinux sha512 -sssd -systemd -yescrypt
sys-auth/passwdqc-2.0.3-r1:0
sys-devel/bc-1.07.1-r6:0 -libedit readline -static
sys-devel/binutils-2.41-r5:2.41 cet -debuginfod -doc -gold -gprofng hardened -multitarget nls -pgo plugins -static-libs -test -vanilla -zstd
sys-devel/binutils-config-5.5:0 native-symlinks
sys-devel/bison-3.8.2-r2:0 -examples nls -static -test -verify-sig
sys-devel/flex-2.6.4-r6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static -test
sys-devel/gcc-13.2.1_p20240113-r1:13 -ada cet -custom-cflags cxx -d -debug default-stack-clash-protection default-znow -doc -fixed-point fortran -go graphite hardened -ieee-long-double -jit -libssp lto -modula2 -multilib -nls -objc -objc++ -objc-gc openmp -pch -pgo pie -sanitize ssp -systemtap -test -valgrind -vanilla -vtv -zstd
sys-devel/gcc-config-2.11:0 cc-wrappers native-symlinks
sys-devel/gettext-0.22.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl cxx -doc -emacs -git -java -java ncurses -nls openmp -static-libs -verify-sig xattr
sys-devel/gnuconfig-20230731:0
sys-devel/llvm-17.0.6:17/17 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 binutils-plugin -debug -debuginfod -doc -doc -exegesis -libedit libffi llvm_targets_AArch64 llvm_targets_AMDGPU -llvm_targets_ARC llvm_targets_ARM llvm_targets_AVR llvm_targets_BPF -llvm_targets_CSKY -llvm_targets_DirectX llvm_targets_Hexagon llvm_targets_Lanai llvm_targets_LoongArch -llvm_targets_M68k llvm_targets_MSP430 llvm_targets_Mips llvm_targets_NVPTX llvm_targets_PowerPC llvm_targets_RISCV -llvm_targets_SPIRV llvm_targets_Sparc llvm_targets_SystemZ llvm_targets_VE llvm_targets_WebAssembly llvm_targets_X86 llvm_targets_XCore -llvm_targets_Xtensa ncurses -test -verify-sig -xar -xml -z3 -zstd
sys-devel/llvm-common-17.0.6:0 -emacs -verify-sig
sys-devel/llvm-toolchain-symlinks-17:17 -multilib-symlinks native-symlinks
sys-devel/llvmgold-17:0
sys-devel/m4-1.4.19-r2:0 -examples nls -verify-sig
sys-devel/patch-2.7.6-r5:0 -static -test -verify-sig xattr
sys-fs/e2fsprogs-1.47.0-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cron -fuse -nls -static-libs -test tools
sys-fs/udev-init-scripts-35:0
sys-kernel/dracut-060_pre20240104-r2:0 -selinux -test
sys-kernel/gentoo-kernel-bin-6.1.77:6.1.77 initramfs -test
sys-kernel/installkernel-25:0 dracut -grub -refind -systemd -systemd-boot -uki -ukify
sys-kernel/linux-headers-6.7:0 -headers-only
sys-libs/argp-standalone-1.5.0:0 -static-libs
sys-libs/binutils-libs-2.41-r5:0/2.41.0 -64-bit-bfd -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cet -multitarget nls -static-libs -test
sys-libs/fts-standalone-1.2.7:0 -static-libs
sys-libs/gdbm-1.23:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 berkdb nls readline -static-libs -test -verify-sig
sys-libs/libcap-2.69-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 pam -static-libs -tools
sys-libs/libseccomp-2.5.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -experimental-loong -python python_targets_python3_10 python_targets_python3_11 -static-libs -test
sys-libs/libxcrypt-4.4.36-r2:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 compat -headers-only split-usr -static-libs system -test
sys-libs/musl-1.2.4-r1:0 -crypt -headers-only split-usr -verify-sig
sys-libs/ncurses-6.4_p20230401:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -ada cxx debug -doc -gpm -minimal -profile split-usr -split-usr -stack-realign -static-libs -test tinfo -trace -verify-sig
sys-libs/obstack-standalone-1.2.3:0 -static-libs
sys-libs/pam-1.5.3-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit -berkdb -debug -filecaps -nis -selinux
sys-libs/queue-standalone-0.1-r1:0
sys-libs/readline-8.2_p10:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 split-usr -static-libs unicode -utils -verify-sig
sys-libs/zlib-1.3.1-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 minizip -static-libs -verify-sig
sys-process/procps-4.0.4-r1:0/0-ng -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 elogind kill -modern-top ncurses nls -selinux -static-libs -systemd -test unicode
sys-process/psmisc-23.6:0 -X -apparmor nls -selinux -test
virtual/acl-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
virtual/dev-manager-0-r2:0
virtual/dist-kernel-6.1.77:0/6.1.77
virtual/editor-0-r7:0
virtual/glu-9.0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
virtual/libc-1-r1:0
virtual/libcrypt-2-r1:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
virtual/libelf-3-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
virtual/libiconv-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
virtual/libintl-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
virtual/libudev-251-r2:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -systemd
virtual/man-0-r4:0
virtual/opengl-7.0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
virtual/openssh-0:0 ssl
virtual/os-headers-0-r2:0
virtual/package-manager-1:0
virtual/pager-0-r1:0
virtual/perl-bignum-0.660.0:0
virtual/perl-Carp-1.540.0:0
virtual/perl-CPAN-2.360.0:0
virtual/perl-Data-Dumper-2.188.0:0
virtual/perl-Encode-3.190.0:0
virtual/perl-Exporter-5.770.0-r1:0
virtual/perl-ExtUtils-MakeMaker-7.700.0:0
virtual/perl-File-Path-2.180.0-r2:0
virtual/perl-File-Spec-3.880.0:0
virtual/perl-File-Temp-0.231.100:0
virtual/perl-Getopt-Long-2.540.0:0
virtual/perl-libnet-3.150.0:0 ssl
virtual/perl-Math-BigInt-1.999.842:0
virtual/perl-Math-BigInt-FastCalc-0.501.300:0
virtual/perl-Math-BigRat-0.262.400:0
virtual/perl-Math-Complex-1.620.0:0
virtual/perl-MIME-Base64-3.160.100_rc:0
virtual/perl-parent-0.241.0:0
virtual/perl-Scalar-List-Utils-1.630.0:0
virtual/perl-Test-Harness-3.440.0-r1:0
virtual/perl-Unicode-Collate-1.310.0-r1:0
virtual/pkgconfig-2-r1:0
virtual/service-manager-1-r1:0
virtual/ssh-0-r2:0 -minimal
virtual/tmpfiles-0-r5:0 -systemd
virtual/ttf-fonts-1-r2:0
virtual/udev-217-r7:0 -systemd
virtual/w3m-1:0
www-client/pybugz-0.13-r3:0 python_targets_python3_10 python_targets_python3_11
www-client/w3m-0.5.3_p20230121:0 -X -fbcon -gdk-pixbuf -gpm -imlib l10n_ja -lynxkeymap nls -nntp ssl unicode -xface
x11-apps/xprop-1.2.7:0
x11-apps/xset-1.2.5:0
x11-base/xcb-proto-1.16.0:0 python_targets_python3_10 python_targets_python3_11 python_targets_python3_12
x11-base/xorg-proto-2023.2:0 -test
x11-libs/cairo-1.18.0:0 X -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -aqua -debug glib -gtk-doc -test
x11-libs/libdrm-2.4.120:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -test -tools -udev -valgrind video_cards_amdgpu -video_cards_exynos -video_cards_freedreno video_cards_intel video_cards_nouveau -video_cards_omap video_cards_radeon -video_cards_tegra -video_cards_vc4 -video_cards_vivante -video_cards_vmware
x11-libs/libICE-1.1.1-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
x11-libs/libpciaccess-0.18:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 zlib
x11-libs/libSM-1.2.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc uuid
x11-libs/libX11-1.8.7:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -test
x11-libs/libXau-1.0.11:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libxcb-1.16-r1:0/1.12 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -doc -selinux -test xkb
x11-libs/libXdmcp-1.1.4-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXext-1.3.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXfixes-6.0.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXi-1.8.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXmu-1.1.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXrandr-1.5.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/libXrender-0.9.11:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
x11-libs/libxshmfence-1.3.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
x11-libs/libXt-1.3.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -test
x11-libs/libXxf86vm-1.1.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc
x11-libs/pixman-0.43.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_iwmmxt -cpu_flags_arm_iwmmxt2 -cpu_flags_arm_neon -cpu_flags_ppc_altivec cpu_flags_x86_mmxext cpu_flags_x86_sse2 cpu_flags_x86_ssse3 -loongson2f -static-libs -test
x11-libs/xcb-util-keysyms-0.4.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
x11-libs/xtrans-1.5.0:0 -doc
x11-misc/compose-tables-1.8.7:0
x11-misc/shared-mime-info-2.4-r1:0 -test
x11-misc/util-macros-1.20.0:0
x11-misc/xdg-utils-1.2.1:0 -dbus -doc -gnome


#############
# build.log #
#############


>>> Unpacking source...
>>> Unpacking unafold-3.8.tar.bz2 to /var/tmp/portage/sci-biology/unafold-3.8-r1/work
>>> Source unpacked in /var/tmp/portage/sci-biology/unafold-3.8-r1/work
>>> Preparing source in /var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8 ...
 * Applying unafold-3.8-doc-version.patch ...
 [ ok ]
 * Applying unafold-3.8-autotools.patch ...
 [ ok ]
 * Applying unafold-3.8-clang16.patch ...
 [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8' ...
 * Running 'aclocal --system-acdir=/var/tmp/portage/sci-biology/unafold-3.8-r1/temp/aclocal' ...
 [ ok ]
 * Running 'autoconf --force' ...
 [ ok ]
 * Running 'autoheader' ...
 [ ok ]
 * Running 'automake --add-missing --copy --foreign --force-missing' ...
 [ ok ]
 * Running elibtoolize in: unafold-3.8/
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8 ...
 * econf: updating unafold-3.8/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating unafold-3.8/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating unafold-3.8/config/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating unafold-3.8/config/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-gentoo-linux-musl --host=x86_64-gentoo-linux-musl --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --datarootdir=/usr/share --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/unafold-3.8-r1 --htmldir=/usr/share/doc/unafold-3.8-r1/html --libdir=/usr/lib --disable-coverage
checking for a BSD-compatible install... /usr/lib/portage/python3.12/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-gentoo-linux-musl
checking for x86_64-gentoo-linux-musl-gcc... x86_64-gentoo-linux-musl-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether x86_64-gentoo-linux-musl-gcc accepts -g... yes
checking for x86_64-gentoo-linux-musl-gcc option to enable C11 features... none needed
checking whether x86_64-gentoo-linux-musl-gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of x86_64-gentoo-linux-musl-gcc... none
checking whether ln -s works... yes
checking for perl... /usr/bin/perl
checking for gnuplot... no
checking whether compiler needs -mieee... no
checking host system type... x86_64-gentoo-linux-musl
checking for x86_64-gentoo-linux-musl-pkg-config... /usr/bin/x86_64-gentoo-linux-musl-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for x86_64-gentoo-linux-musl-pkg-config... (cached) /usr/bin/x86_64-gentoo-linux-musl-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for gl... yes
checking for GL/gl.h... yes
checking for compiling a minimal OpenGL program... yes
checking for linking a minimal OpenGL program... yes
checking for library containing glutMainLoop... -lglut
checking for GL/glut.h... yes
checking for compiling a minimal GLUT program... yes
checking for linking a minimal GLUT program... yes
checking for gdlib-config... no
checking for gdImageCreate in -lgd... yes
checking for gdImageGif in -lgd... yes
checking for gdImageJpeg in -lgd... yes
checking for gdImagePng in -lgd... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fcntl.h... yes
checking for ieeefp.h... no
checking for libintl.h... yes
checking for limits.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking whether scanf() understands "inf"... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating scripts/Makefile
config.status: creating data/Makefile
config.status: creating doc/Makefile
config.status: creating tests/Makefile
config.status: creating scripts/concentrations.pl
config.status: creating scripts/concentrations-same.pl
config.status: creating scripts/hybrid2.pl
config.status: creating scripts/hybrid-2s.pl
config.status: creating scripts/hybrid-ss-2s.pl
config.status: creating scripts/hybrid-select.pl
config.status: creating scripts/melt.pl
config.status: creating scripts/plot2ann.pl
config.status: creating scripts/h-num.pl
config.status: creating scripts/ss-count.pl
config.status: creating scripts/ct-energy-det.pl
config.status: creating scripts/UNAFold.pl
config.status: creating scripts/ITC-plot.pl
config.status: creating scripts/vantHoff-plot.pl
config.status: creating doc/hybrid.1
config.status: creating doc/hybrid-min.1
config.status: creating doc/hybrid-ss.1
config.status: creating doc/hybrid-ss-min.1
config.status: creating doc/hybrid-ss-noml.1
config.status: creating doc/hybrid-ss-simple.1
config.status: creating doc/hybrid-plot.1
config.status: creating doc/hybrid-plot-ng.1
config.status: creating doc/concentration.1
config.status: creating doc/concentration-same.1
config.status: creating doc/concentrations.pl.1
config.status: creating doc/concentrations-same.pl.1
config.status: creating doc/ensemble-dg.1
config.status: creating doc/ensemble-dg-same.1
config.status: creating doc/ensemble-ext.1
config.status: creating doc/ensemble-ext-same.1
config.status: creating doc/dG2dH.1
config.status: creating doc/dG2dS.1
config.status: creating doc/dG2Cp.1
config.status: creating doc/ct-energy.1
config.status: creating doc/hybrid2.pl.1
config.status: creating doc/hybrid2-x.pl.1
config.status: creating doc/hybrid2-min.pl.1
config.status: creating doc/hybrid2-min-x.pl.1
config.status: creating doc/hybrid2-2s.pl.1
config.status: creating doc/hybrid2-2s-x.pl.1
config.status: creating doc/ct-ext.1
config.status: creating doc/ct-uniq.1
config.status: creating doc/hybrid-2s.pl.1
config.status: creating doc/hybrid-ss-2s.pl.1
config.status: creating doc/ct-prob.1
config.status: creating doc/melt.pl.1
config.status: creating doc/plot2ann.pl.1
config.status: creating doc/h-num.pl.1
config.status: creating doc/ss-count.pl.1
config.status: creating doc/hybrid-select.pl.1
config.status: creating doc/ct2rnaml.1
config.status: creating doc/ct-energy-det.pl.1
config.status: creating doc/UNAFold.pl.1
config.status: creating doc/ITC-plot.pl.1
config.status: creating doc/vantHoff-plot.pl.1
config.status: creating config.h
config.status: executing depfiles commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8 ...
make -j16 
make  all-recursive
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'
Making all in src
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/src'
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o getopt.o getopt.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o getopt1.o getopt1.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o energy.o energy.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o xmalloc.o xmalloc.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid.o hybrid.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DENERGY=int -DINTEGER -DPRECISION=1000 -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_min-energy.o `test -f 'energy.c' || echo './'`energy.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DENERGY=int -DINTEGER -DPRECISION=1000 -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_min-hybrid-min.o `test -f 'hybrid-min.c' || echo './'`hybrid-min.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid-ss.o hybrid-ss.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DENERGY=int -DINTEGER -DPRECISION=1000 -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_ss_min-energy.o `test -f 'energy.c' || echo './'`energy.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DENERGY=int -DINTEGER -DPRECISION=1000 -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_ss_min-hybrid-ss-min.o `test -f 'hybrid-ss-min.c' || echo './'`hybrid-ss-min.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid-ss-noml.o hybrid-ss-noml.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid-ss-simple.o hybrid-ss-simple.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_plot-hybrid-plot.o `test -f 'hybrid-plot.c' || echo './'`hybrid-plot.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o hybrid_plot_ng-hybrid-plot-ng.o `test -f 'hybrid-plot-ng.c' || echo './'`hybrid-plot-ng.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o sbs.o sbs.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o concentration.o concentration.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o concentration-same.o concentration-same.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ensemble-dg.o ensemble-dg.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ensemble-dg-same.o ensemble-dg-same.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ensemble-ext.o ensemble-ext.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ensemble-ext-same.o ensemble-ext-same.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o dG2Cp.o dG2Cp.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o dG2dH.o dG2dH.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DENTROPY   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o dG2dS-dG2dH.o `test -f 'dG2dH.c' || echo './'`dG2dH.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ct-energy.o ct-energy.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ct-ext.o ct-ext.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ct-uniq.o ct-uniq.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ct-prob.o ct-prob.c
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I..  -DPKGDATADIR=\"/usr/share/unafold/\"   -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -c -o ct2rnaml.o ct2rnaml.c
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-plot-ng hybrid_plot_ng-hybrid-plot-ng.o getopt.o getopt1.o xmalloc.o -lgd  -lGL -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o concentration getopt.o getopt1.o xmalloc.o concentration.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o concentration-same getopt.o getopt1.o xmalloc.o concentration-same.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ensemble-dg getopt.o getopt1.o xmalloc.o ensemble-dg.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ensemble-dg-same getopt.o getopt1.o xmalloc.o ensemble-dg-same.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o dG2Cp getopt.o getopt1.o xmalloc.o dG2Cp.o  -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o dG2dH getopt.o getopt1.o xmalloc.o dG2dH.o  -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o dG2dS dG2dS-dG2dH.o getopt.o getopt1.o xmalloc.o -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ct-ext getopt.o getopt1.o ct-ext.o xmalloc.o  -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ct-uniq ct-uniq.o xmalloc.o  -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ct-prob getopt.o getopt1.o ct-prob.o xmalloc.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ensemble-ext-same getopt.o getopt1.o xmalloc.o ensemble-ext-same.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-plot hybrid_plot-hybrid-plot.o getopt.o getopt1.o xmalloc.o -lglut -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ct2rnaml ct2rnaml.o xmalloc.o  -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ensemble-ext getopt.o getopt1.o xmalloc.o ensemble-ext.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid getopt.o getopt1.o energy.o xmalloc.o hybrid.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o sbs getopt.o getopt1.o energy.o xmalloc.o sbs.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o ct-energy getopt.o getopt1.o energy.o xmalloc.o ct-energy.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-ss-noml getopt.o getopt1.o energy.o xmalloc.o hybrid-ss-noml.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-ss-simple getopt.o getopt1.o energy.o xmalloc.o hybrid-ss-simple.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-min hybrid_min-energy.o hybrid_min-hybrid-min.o getopt.o getopt1.o xmalloc.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-ss getopt.o getopt1.o energy.o xmalloc.o hybrid-ss.o -lm -lglut -lGL 
x86_64-gentoo-linux-musl-gcc  -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o hybrid-ss-min hybrid_ss_min-energy.o hybrid_ss_min-hybrid-ss-min.o getopt.o getopt1.o xmalloc.o -lm -lglut -lGL 
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/src'
Making all in data
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/data'
/usr/bin/perl ../machine.pl inf rules/asint1x2.dg asint1x2.DG
/usr/bin/perl ../machine.pl 0 rules/asint1x2.dh asint1x2.DH
/usr/bin/perl ../machine.pl inf rules/dangle.dg dangle.DG
/usr/bin/perl ../machine.pl 0 rules/dangle.dh dangle.DH
/usr/bin/perl ../machine.pl inf rules/loop.dg loop.DG
/usr/bin/perl ../machine.pl 0 rules/loop.dh loop.DH
/usr/bin/perl ../machine.pl inf rules/miscloop.dg miscloop.DG
/usr/bin/perl ../machine.pl 0 rules/miscloop.dh miscloop.DH
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches inf rules/sint2.dg sint2.DG
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches 0 rules/sint2.dh sint2.DH
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches inf rules/sint4.dg sint4.DG
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches 0 rules/sint4.dh sint4.DH
/usr/bin/perl ../machine.pl inf rules/stack.dg stack.DG
/usr/bin/perl ../machine.pl 0 rules/stack.dh stack.DH
/usr/bin/perl ../machine.pl inf rules/tstackh.dg tstackh.DG
/usr/bin/perl ../machine.pl 0 rules/tstackh.dh tstackh.DH
/usr/bin/perl ../machine.pl inf rules/tstacki.dg tstacki.DG
/usr/bin/perl ../machine.pl 0 rules/tstacki.dh tstacki.DH
/usr/bin/perl ../machine.pl inf rules/tstacki23.dg tstacki23.DG
/usr/bin/perl ../machine.pl 0 rules/tstacki23.dh tstacki23.DH
/usr/bin/perl ../machine.pl inf rules/tstackm.dg tstackm.DG
/usr/bin/perl ../machine.pl 0 rules/tstackm.dh tstackm.DH
/usr/bin/perl ../machine.pl inf rules/tstacke.dg tstacke.DG
/usr/bin/perl ../machine.pl 0 rules/tstacke.dh tstacke.DH
/usr/bin/perl ../machine.pl inf rules/triloop.dg triloop.DG
/usr/bin/perl ../machine.pl 0 rules/triloop.dh triloop.DH
/usr/bin/perl ../machine.pl inf rules/tloop.dg tloop.DG
/usr/bin/perl ../machine.pl 0 rules/tloop.dh tloop.DH
/usr/bin/perl ../machine.pl inf rules/hexaloop.dg hexaloop.DG
/usr/bin/perl ../machine.pl 0 rules/hexaloop.dh hexaloop.DH
/usr/bin/perl ../machine.pl inf rules/asint1x2.dgd asint1x2.DGD
/usr/bin/perl ../machine.pl 0 rules/asint1x2.dhd asint1x2.DHD
/usr/bin/perl ../machine.pl inf rules/dangle.dgd dangle.DGD
/usr/bin/perl ../machine.pl 0 rules/dangle.dhd dangle.DHD
/usr/bin/perl ../machine.pl inf rules/loop.dgd loop.DGD
/usr/bin/perl ../machine.pl 0 rules/loop.dhd loop.DHD
/usr/bin/perl ../machine.pl inf rules/miscloop.dgd miscloop.DGD
/usr/bin/perl ../machine.pl 0 rules/miscloop.dhd miscloop.DHD
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches --no-double-gu-close inf rules/sint2.dgd sint2.DGD
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches --no-double-gu-close 0 rules/sint2.dhd sint2.DHD
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches inf rules/sint4.dgd sint4.DGD
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-mismatches 0 rules/sint4.dhd sint4.DHD
/usr/bin/perl ../machine.pl inf rules/stack.dgd stack.DGD
/usr/bin/perl ../machine.pl 0 rules/stack.dhd stack.DHD
/usr/bin/perl ../machine.pl inf rules/tstackh.dgd tstackh.DGD
/usr/bin/perl ../machine.pl 0 rules/tstackh.dhd tstackh.DHD
/usr/bin/perl ../machine.pl inf rules/tstacki.dgd tstacki.DGD
/usr/bin/perl ../machine.pl 0 rules/tstacki.dhd tstacki.DHD
/usr/bin/perl ../machine.pl inf rules/tstacki23.dgd tstacki23.DGD
/usr/bin/perl ../machine.pl 0 rules/tstacki23.dhd tstacki23.DHD
/usr/bin/perl ../machine.pl inf rules/tstackm.dgd tstackm.DGD
/usr/bin/perl ../machine.pl 0 rules/tstackm.dhd tstackm.DHD
/usr/bin/perl ../machine.pl inf rules/tstacke.dgd tstacke.DGD
/usr/bin/perl ../machine.pl 0 rules/tstacke.dhd tstacke.DHD
/usr/bin/perl ../machine.pl inf rules/triloop.dgd triloop.DGD
/usr/bin/perl ../machine.pl 0 rules/triloop.dhd triloop.DHD
/usr/bin/perl ../machine.pl inf rules/tloop.dgd tloop.DGD
/usr/bin/perl ../machine.pl 0 rules/tloop.dhd tloop.DHD
/usr/bin/perl ../machine.pl inf rules/hexaloop.dgd hexaloop.DGD
/usr/bin/perl ../machine.pl 0 rules/hexaloop.dhd hexaloop.DHD
/usr/bin/perl ../machine.pl inf rules/asint1x2.dat asint1x2.DAT
/usr/bin/perl ../machine.pl inf rules/dangle.dat dangle.DAT
/usr/bin/perl ../machine.pl inf rules/loop.dat loop.DAT
/usr/bin/perl ../machine.pl inf rules/miscloop.dat miscloop.DAT
/usr/bin/perl ../machine.pl --no-wc-mismatches --no-gu-close inf rules/sint2.dat sint2.DAT
/usr/bin/perl ../machine.pl --no-wc-mismatches inf rules/sint4.dat sint4.DAT
/usr/bin/perl ../machine.pl --no-gu-gu-stacks inf rules/stack.dat stack.DAT
/usr/bin/perl ../machine.pl inf rules/tstackh.dat tstackh.DAT
/usr/bin/perl ../machine.pl inf rules/tstacki.dat tstacki.DAT
/usr/bin/perl ../machine.pl inf rules/tstacki23.dat tstacki23.DAT
/usr/bin/perl ../machine.pl inf rules/tstackm.dat tstackm.DAT
/usr/bin/perl ../machine.pl inf rules/tstacke.dat tstacke.DAT
/usr/bin/perl ../machine.pl inf rules/triloop.dat triloop.DAT
/usr/bin/perl ../machine.pl inf rules/tloop.dat tloop.DAT
/usr/bin/perl ../machine.pl inf rules/hexaloop.dat hexaloop.DAT
/usr/bin/perl ../machine.pl inf rules/extinction.dat extinction.DAT
/usr/bin/perl ../machine.pl --null-energies inf rules/asint1x2.dg asint1x2.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/dangle.dg dangle.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/loop.dg loop.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/miscloop.dg miscloop.NUL
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches --no-gu-mismatches inf rules/sint2.dg sint2.NUL
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches --no-gu-mismatches inf rules/sint4.dg sint4.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/stack.dg stack.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackh.dg tstackh.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacki.dg tstacki.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackm.dg tstackm.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacke.dg tstacke.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/triloop.dg triloop.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/tloop.dg tloop.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/hexaloop.dg hexaloop.NUL
/usr/bin/perl ../machine.pl --null-energies inf rules/asint1x2.dgd asint1x2.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/dangle.dgd dangle.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/loop.dgd loop.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/miscloop.dgd miscloop.NULD
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches --no-gu-mismatches inf rules/sint2.dgd sint2.NULD
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches --no-gu-mismatches inf rules/sint4.dgd sint4.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/stack.dgd stack.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackh.dgd tstackh.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacki.dgd tstacki.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacki23.dgd tstacki23.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackm.dgd tstackm.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacke.dgd tstacke.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/triloop.dgd triloop.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/tloop.dgd tloop.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/hexaloop.dgd hexaloop.NULD
/usr/bin/perl ../machine.pl --null-energies inf rules/asint1x2.dat asint1x2.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/dangle.dat dangle.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/loop.dat loop.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/miscloop.dat miscloop.NULDAT
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches --no-gu-close inf rules/sint2.dat sint2.NULDAT
/usr/bin/perl ../machine.pl --null-energies --no-wc-mismatches inf rules/sint4.dat sint4.NULDAT
/usr/bin/perl ../machine.pl --null-energies --no-gu-gu-stacks inf rules/stack.dat stack.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackh.dat tstackh.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacki.dat tstacki.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacki23.dat tstacki23.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tstackm.dat tstackm.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tstacke.dat tstacke.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/triloop.dat triloop.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/tloop.dat tloop.NULDAT
/usr/bin/perl ../machine.pl --null-energies inf rules/hexaloop.dat hexaloop.NULDAT
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/data'
Making all in scripts
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/scripts'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/scripts'
Making all in doc
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/doc'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/doc'
Making all in tests
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'
>>> Source compiled.
>>> Test phase: sci-biology/unafold-3.8-r1
make -j16   check
Making check in src
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/src'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/src'
Making check in data
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/data'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/data'
Making check in scripts
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/scripts'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/scripts'
Making check in doc
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/doc'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/doc'
Making check in tests
make[1]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
make  check-local
make[2]: Entering directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
UNAFOLDDAT=../data PATH=../src:/usr/lib/portage/python3.12/ebuild-helpers/xattr:/usr/lib/portage/python3.12/ebuild-helpers:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/17/bin PERL5OPT= perl ./test.pl hybrid.tml > hybrid.to
Can't locate XML/Parser.pm in @INC (you may need to install the XML::Parser module) (@INC entries checked: /etc/perl /usr/local/lib/perl5/5.38/x86_64-linux-debug-thread-multi /usr/local/lib/perl5/5.38 /usr/lib/perl5/vendor_perl/5.38/x86_64-linux-debug-thread-multi /usr/lib/perl5/vendor_perl/5.38 /usr/lib/perl5/5.38/x86_64-linux-debug-thread-multi /usr/lib/perl5/5.38 /usr/lib/perl5/vendor_perl/5.36) at ./test.pl line 6.
BEGIN failed--compilation aborted at ./test.pl line 6.
make[2]: *** [Makefile:441: hybrid.to] Error 2
make[2]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
make[1]: *** [Makefile:316: check-am] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8/tests'
make: *** [Makefile:386: check-recursive] Error 1
 * ERROR: sci-biology/unafold-3.8-r1::gentoo failed (test phase):
 *   Make check failed. See above for details.
 * 
 * Call stack:
 *            ebuild.sh, line  136:  Called src_test
 *          environment, line 1787:  Called default
 *   phase-functions.sh, line  871:  Called default_src_test
 *   phase-functions.sh, line  900:  Called __eapi0_src_test
 *     phase-helpers.sh, line  832:  Called die
 * The specific snippet of code:
 *   		${emake_cmd} ${internal_opts} check || \
 *   			die "Make check failed. See above for details."
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/unafold-3.8-r1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/unafold-3.8-r1::gentoo'`.
 * The complete build log is located at '/var/log/emerge-log/build/sci-biology/unafold-3.8-r1:20240215-213416.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/unafold-3.8-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/unafold-3.8-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'
 * S: '/var/tmp/portage/sci-biology/unafold-3.8-r1/work/unafold-3.8'