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Gentoo's Bugzilla – Attachment 868238 Details for
Bug 912660
sys-apps/portage: random crashes when running emerge
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crash log from 21-06-2023
emerge-crash-21-06-23.log (text/x-log), 16.03 KB, created by
Michael Mair-Keimberger (iamnr3)
on 2023-08-20 08:17:22 UTC
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Description:
crash log from 21-06-2023
Filename:
MIME Type:
Creator:
Michael Mair-Keimberger (iamnr3)
Created:
2023-08-20 08:17:22 UTC
Size:
16.03 KB
patch
obsolete
>vs4 ~ # emerge -avuDN @world >Traceback (most recent call last): > File "/usr/lib/python-exec/python3.11/emerge", line 59, in <module> > retval = emerge_main() > ^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/_emerge/main.py", line 1258, in emerge_main > emerge_config = load_emerge_config(action=myaction, args=myfiles, opts=myopts) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/proxy/objectproxy.py", line 31, in __call__ > return result(*args, **kwargs) > ^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/_emerge/actions.py", line 2908, in load_emerge_config > emerge_config.trees = portage.create_trees(trees=emerge_config.trees, **kwargs) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/__init__.py", line 650, in create_trees > settings = config( > ^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/package/ebuild/config.py", line 645, in __init__ > self.repositories = load_repository_config(self) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/repository/config.py", line 1361, in load_repository_config > return RepoConfigLoader(repoconfigpaths, settings) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/repository/config.py", line 1127, in __init__ > tree_db = eclass_cache.cache(eclass_location) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/eclass_cache.py", line 76, in __init__ > self.update_eclasses() > File "/usr/lib/python3.11/site-packages/portage/eclass_cache.py", line 115, in update_eclasses > eclass_filenames = os.listdir(x) > ^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/__init__.py", line 280, in __call__ > rval = self._func(*wrapped_args, **wrapped_kwargs) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >OSError: [Errno 12] Cannot allocate memory: b'/usr/portage/eclass' > > >[Wed Jun 21 18:07:22 2023] warn_alloc: 7 callbacks suppressed >[Wed Jun 21 18:07:22 2023] emerge: page allocation failure: order:5, mode:0x40dc0(GFP_KERNEL|__GFP_COMP|__GFP_ZERO), nodemask=(null),cpuset=/,mems_allowed=0 >[Wed Jun 21 18:07:22 2023] CPU: 0 PID: 19813 Comm: emerge Not tainted 6.1.12-gentoo #2 >[Wed Jun 21 18:07:22 2023] Hardware name: QEMU Standard PC (Q35 + ICH9, 2009), BIOS 1.16.0-20220807_005459-localhost 04/01/2014 >[Wed Jun 21 18:07:22 2023] Call Trace: >[Wed Jun 21 18:07:22 2023] <TASK> >[Wed Jun 21 18:07:22 2023] dump_stack_lvl+0x33/0x46 >[Wed Jun 21 18:07:22 2023] warn_alloc+0x124/0x150 >[Wed Jun 21 18:07:22 2023] ? __alloc_pages_direct_compact+0x186/0x2e0 >[Wed Jun 21 18:07:22 2023] __alloc_pages_slowpath.constprop.0+0xcb0/0xd80 >[Wed Jun 21 18:07:22 2023] ? get_page_from_freelist+0x35e/0xe90 >[Wed Jun 21 18:07:22 2023] __alloc_pages+0x29e/0x360 >[Wed Jun 21 18:07:22 2023] ? v9fs_alloc_rdir_buf.isra.0+0x23/0x30 >[Wed Jun 21 18:07:22 2023] __kmalloc_large_node+0x69/0x100 >[Wed Jun 21 18:07:22 2023] __kmalloc+0x6e/0x150 >[Wed Jun 21 18:07:22 2023] v9fs_alloc_rdir_buf.isra.0+0x23/0x30 >[Wed Jun 21 18:07:22 2023] v9fs_dir_readdir_dotl+0x4c/0x160 >[Wed Jun 21 18:07:22 2023] ? delete_node+0x93/0x1d0 >[Wed Jun 21 18:07:22 2023] ? radix_tree_delete_item+0x64/0xd0 >[Wed Jun 21 18:07:22 2023] ? p9_req_put+0x9d/0xe0 >[Wed Jun 21 18:07:22 2023] ? p9_client_getattr_dotl+0x89/0x120 >[Wed Jun 21 18:07:22 2023] ? _copy_to_user+0x21/0x30 >[Wed Jun 21 18:07:22 2023] ? cp_new_stat+0x14b/0x180 >[Wed Jun 21 18:07:22 2023] ? __rseq_handle_notify_resume+0x336/0x4b0 >[Wed Jun 21 18:07:22 2023] iterate_dir+0x172/0x1c0 >[Wed Jun 21 18:07:22 2023] __x64_sys_getdents64+0x7f/0x120 >[Wed Jun 21 18:07:22 2023] ? fillonedir+0x130/0x130 >[Wed Jun 21 18:07:22 2023] do_syscall_64+0x42/0x90 >[Wed Jun 21 18:07:22 2023] entry_SYSCALL_64_after_hwframe+0x63/0xcd >[Wed Jun 21 18:07:22 2023] RIP: 0033:0x7fc725df8ea3 >[Wed Jun 21 18:07:22 2023] Code: df 66 0f 1f 44 00 00 48 89 ef e8 08 61 fb ff 4c 89 e0 5b 5d 41 5c c3 b8 ff ff ff 7f 48 39 c2 48 0f 47 d0 b8 d9 00 00 00 0f 05 <48> 3d 00 f0 ff ff 77 05 c3 0f 1f 40 00 48 8b 15 29 cf 0f 00 f7 d8 >[Wed Jun 21 18:07:22 2023] RSP: 002b:00007ffe300c6cf8 EFLAGS: 00000293 ORIG_RAX: 00000000000000d9 >[Wed Jun 21 18:07:22 2023] RAX: ffffffffffffffda RBX: 000055e3396c13a0 RCX: 00007fc725df8ea3 >[Wed Jun 21 18:07:22 2023] RDX: 000000000001f000 RSI: 000055e3396c13d0 RDI: 0000000000000003 >[Wed Jun 21 18:07:22 2023] RBP: 000055e3396c13a4 R08: 0000000000000000 R09: 0000000000000000 >[Wed Jun 21 18:07:22 2023] R10: 0000000000000000 R11: 0000000000000293 R12: ffffffffffffff80 >[Wed Jun 21 18:07:22 2023] R13: 0000000000000000 R14: 0000000000000000 R15: 00007fc722d8b380 >[Wed Jun 21 18:07:22 2023] </TASK> >[Wed Jun 21 18:07:22 2023] Mem-Info: >[Wed Jun 21 18:07:22 2023] active_anon:421 inactive_anon:62081 isolated_anon:0 > active_file:457412 inactive_file:230942 isolated_file:0 > unevictable:769 dirty:335 writeback:0 > slab_reclaimable:165488 slab_unreclaimable:59027 > mapped:20068 shmem:10666 pagetables:888 > sec_pagetables:0 bounce:0 > kernel_misc_reclaimable:0 > free:20452 free_pcp:0 free_cma:0 >[Wed Jun 21 18:07:22 2023] Node 0 active_anon:1684kB inactive_anon:248324kB active_file:1829648kB inactive_file:923768kB unevictable:3076kB isolated(anon):0kB isolated(file):0kB mapped:80272kB dirty:1340kB writeback:0kB shmem:42664kB writeback_tmp:0kB kernel_stack:2544kB pagetables:3552kB sec_pagetables:0kB all_unreclaimable? no >[Wed Jun 21 18:07:22 2023] Node 0 DMA free:15356kB boost:0kB min:28kB low:40kB high:52kB reserved_highatomic:0KB active_anon:0kB inactive_anon:0kB active_file:0kB inactive_file:0kB unevictable:0kB writepending:0kB present:15992kB managed:15356kB mlocked:0kB bounce:0kB free_pcp:0kB local_pcp:0kB free_cma:0kB >[Wed Jun 21 18:07:22 2023] lowmem_reserve[]: 0 1923 3900 3900 >[Wed Jun 21 18:07:22 2023] Node 0 DMA32 free:52196kB boost:0kB min:3932kB low:5900kB high:7868kB reserved_highatomic:0KB active_anon:432kB inactive_anon:56172kB active_file:565172kB inactive_file:601412kB unevictable:0kB writepending:556kB present:2080608kB managed:1977388kB mlocked:0kB bounce:0kB free_pcp:0kB local_pcp:0kB free_cma:0kB >[Wed Jun 21 18:07:22 2023] lowmem_reserve[]: 0 0 1976 1976 >[Wed Jun 21 18:07:22 2023] Node 0 Normal free:14256kB boost:0kB min:4040kB low:6064kB high:8088kB reserved_highatomic:2048KB active_anon:1252kB inactive_anon:192008kB active_file:1264056kB inactive_file:322492kB unevictable:3076kB writepending:776kB present:2097152kB managed:2024196kB mlocked:0kB bounce:0kB free_pcp:0kB local_pcp:0kB free_cma:0kB >[Wed Jun 21 18:07:22 2023] lowmem_reserve[]: 0 0 0 0 >[Wed Jun 21 18:07:22 2023] Node 0 DMA: 1*4kB (M) 1*8kB (M) 1*16kB (M) 1*32kB (M) 1*64kB (M) 1*128kB (M) 1*256kB (M) 1*512kB (M) 2*1024kB (UM) 2*2048kB (M) 2*4096kB (M) = 15356kB >[Wed Jun 21 18:07:22 2023] Node 0 DMA32: 765*4kB (UME) 1768*8kB (UME) 1273*16kB (UME) 379*32kB (UME) 42*64kB (UME) 0*128kB 0*256kB 0*512kB 0*1024kB 0*2048kB 0*4096kB = 52388kB >[Wed Jun 21 18:07:22 2023] Node 0 Normal: 721*4kB (UMEH) 319*8kB (UMEH) 191*16kB (UMEH) 181*32kB (UMEH) 4*64kB (M) 0*128kB 0*256kB 0*512kB 0*1024kB 0*2048kB 0*4096kB = 14540kB >[Wed Jun 21 18:07:22 2023] Node 0 hugepages_total=0 hugepages_free=0 hugepages_surp=0 hugepages_size=2048kB >[Wed Jun 21 18:07:22 2023] 699059 total pagecache pages >[Wed Jun 21 18:07:22 2023] 2 pages in swap cache >[Wed Jun 21 18:07:22 2023] Free swap = 4193524kB >[Wed Jun 21 18:07:22 2023] Total swap = 4194300kB >[Wed Jun 21 18:07:22 2023] 1048438 pages RAM >[Wed Jun 21 18:07:22 2023] 0 pages HighMem/MovableOnly >[Wed Jun 21 18:07:22 2023] 44203 pages reserved >[Wed Jun 21 18:09:49 2023] hrtimer: interrupt took 25641519 ns > > > > >Performing Global Updates >(Could take a couple of minutes if you have a lot of binary packages.) > .='update pass' *='binary update' #='/var/db update' @='/var/db move' > s='/var/db SLOT move' %='binary move' S='binary SLOT move' > p='update /etc/portage/package.*' >/usr/portage/profiles/updates/2Q-2023.............................. > > >Traceback (most recent call last): > File "/usr/lib/python-exec/python3.11/emerge", line 59, in <module> > retval = emerge_main() > ^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/_emerge/main.py", line 1299, in emerge_main > return run_action(emerge_config) > ^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/_emerge/actions.py", line 3426, in run_action > load_emerge_config(emerge_config=emerge_config) > File "/usr/lib/python3.11/site-packages/_emerge/actions.py", line 2908, in load_emerge_config > emerge_config.trees = portage.create_trees(trees=emerge_config.trees, **kwargs) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/__init__.py", line 650, in create_trees > settings = config( > ^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/package/ebuild/config.py", line 645, in __init__ > self.repositories = load_repository_config(self) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/repository/config.py", line 1361, in load_repository_config > return RepoConfigLoader(repoconfigpaths, settings) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/repository/config.py", line 1127, in __init__ > tree_db = eclass_cache.cache(eclass_location) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/eclass_cache.py", line 76, in __init__ > self.update_eclasses() > File "/usr/lib/python3.11/site-packages/portage/eclass_cache.py", line 115, in update_eclasses > eclass_filenames = os.listdir(x) > ^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/portage/__init__.py", line 280, in __call__ > rval = self._func(*wrapped_args, **wrapped_kwargs) > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >OSError: [Errno 12] Cannot allocate memory: b'/usr/portage/eclass' > > >vs4 ~ # emerge --info >Portage 3.0.45.3 (python 3.11.3-final-0, default/linux/amd64/17.1, gcc-12, glibc-2.36-r8, 6.1.12-gentoo x86_64) >================================================================= >System uname: Linux-6.1.12-gentoo-x86_64-AMD_Ryzen_5_3600_6-Core_Processor-with-glibc2.36 >KiB Mem: 4016940 total, 125412 free >KiB Swap: 4194300 total, 4190172 free >Timestamp of repository gentoo: Sat, 17 Jun 2023 22:47:02 +0000 >sh bash 5.1_p16-r4 >ld GNU ld (Gentoo 2.39 p6) 2.39.0 >app-misc/pax-utils: 1.3.5::gentoo >app-shells/bash: 5.1_p16-r4::gentoo >dev-lang/perl: 5.36.0-r2::gentoo >dev-lang/python: 3.11.3::gentoo >dev-lang/rust: 1.69.0-r1::gentoo >dev-util/cmake: 3.26.3::gentoo >dev-util/meson: 1.1.1::gentoo >sys-apps/baselayout: 2.13-r1::gentoo >sys-apps/openrc: 0.46::gentoo >sys-apps/sandbox: 2.29::gentoo >sys-devel/autoconf: 2.71-r5::gentoo >sys-devel/automake: 1.16.5::gentoo >sys-devel/binutils: 2.39-r5::gentoo >sys-devel/binutils-config: 5.5::gentoo >sys-devel/gcc: 12.2.1_p20230428-r1::gentoo >sys-devel/gcc-config: 2.10::gentoo >sys-devel/libtool: 2.4.7-r1::gentoo >sys-devel/make: 4.4.1-r1::gentoo >sys-kernel/linux-headers: 6.1::gentoo (virtual/os-headers) >sys-libs/glibc: 2.36-r8::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://192.168.2.1/gentoo-portage > priority: -1000 > volatile: True > sync-rsync-verify-jobs: 1 > sync-rsync-verify-max-age: 24 > sync-rsync-extra-opts: > sync-rsync-verify-metamanifest: yes > >Installed sets: @g_base, @g_base_openrc, @g_base_vm, @vs4 >ACCEPT_KEYWORDS="amd64" >ACCEPT_LICENSE="@FREE" >CBUILD="x86_64-pc-linux-gnu" >CFLAGS="-O2 -pipe" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /etc/openldap/ldap.conf /etc/ssh/sshd_config /etc/sssd/sssd.conf /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.0/ext-active/ /etc/php/apache2-php8.1/ext-active/ /etc/php/cgi-php8.0/ext-active/ /etc/php/cgi-php8.1/ext-active/ /etc/php/cli-php8.0/ext-active/ /etc/php/cli-php8.1/ext-active/ /etc/php/fpm-php8.0/ext-active/ /etc/php/fpm-php8.1/ext-active/ /etc/php/phpdbg-php8.0/ext-active/ /etc/php/phpdbg-php8.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXXFLAGS="-O2 -pipe" >DISTDIR="/mnt/distfiles" >EMERGE_DEFAULT_OPTS="--oneshot --with-bdeps=y --jobs=3 -g --binpkg-changed-deps=y --binpkg-respect-use=y --keep-going" >ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" >FCFLAGS="-O2 -pipe" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -pipe" >GENTOO_MIRRORS="http://distfiles.gentoo.org" >LANG="en_US.utf8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed" >LEX="flex" >LINGUAS="en" >MAKEOPTS="-j3" >PKGDIR="/mnt/packages" >PORTAGE_BINHOST="http://vs7:8080/vs4" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >SHELL="/bin/bash" >USE="acl amd64 bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl test-rust threads unicode vim-syntax xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-0 php8-1" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_11" PYTHON_TARGETS="python3_11" RUBY_TARGETS="ruby31" VIDEO_CARDS="qxl" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account" >Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
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bug 912660
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