* Package: sci-libs/silo-4.11-r1:0 * Repository: gentoo * Maintainer: cluster@gentoo.org * USE: abi_x86_64 amd64 elibc_musl hdf5 kernel_linux silex * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox @@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; This ebuild was merged at the following commit: https://github.com/gentoo-mirror/gentoo/commit/1de50c159e0d2f4462cfb5e7adc5553278fd1a51 (Tue Jun 13 16:32:00 UTC 2023) @@@@@ END @@@@@ ################## # emerge --info: # ################## Portage 3.0.48.1 (python 3.11.4-final-0, default/linux/amd64/17.0/musl/hardened, gcc-13, musl-1.2.4, 6.1.27-gentoo-dist x86_64) ================================================================= System uname: Linux-6.1.27-gentoo-dist-x86_64-AMD_EPYC_7513_32-Core_Processor-with-libc KiB Mem: 263516592 total, 43662036 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Tue, 13 Jun 2023 16:32:00 +0000 sh bash 5.2_p15-r3 ld GNU ld (Gentoo 2.40 p5) 2.40.0 app-misc/pax-utils: 1.3.7::gentoo app-shells/bash: 5.2_p15-r3::gentoo dev-lang/perl: 5.36.1-r2::gentoo dev-lang/python: 3.10.12::gentoo, 3.11.4::gentoo, 3.12.0_beta2::gentoo dev-util/cmake: 3.26.4-r1::gentoo dev-util/meson: 1.1.1::gentoo sys-apps/baselayout: 2.13-r1::gentoo sys-apps/openrc: 0.47.1::gentoo sys-apps/sandbox: 2.30-r1::gentoo sys-devel/autoconf: 2.71-r6::gentoo sys-devel/automake: 1.16.5-r1::gentoo sys-devel/binutils: 2.40-r5::gentoo sys-devel/binutils-config: 5.5::gentoo sys-devel/gcc: 13.1.1_p20230527::gentoo sys-devel/gcc-config: 2.11::gentoo sys-devel/libtool: 2.4.7-r1::gentoo sys-devel/make: 4.4.1-r1::gentoo sys-kernel/linux-headers: 6.3::gentoo (virtual/os-headers) sys-libs/musl: 1.2.4::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 volatile: True sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: sync-rsync-verify-jobs: 1 sync-rsync-verify-max-age: 24 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* BSD" CBUILD="x86_64-gentoo-linux-musl" CFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" CHOST="x86_64-gentoo-linux-musl" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" DISTDIR="/var/tmp/portage/sci-libs/silo-4.11-r1/distdir" EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -k -b --backtrack=100" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" FCFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0" GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://ftp.snt.utwente.nl/pub/os/linux/gentoo/ http://ftp.belnet.be/pub/rsync.gentoo.org/gentoo/ http://distfiles.gentoo.org" INSTALL_MASK="charset.alias /usr/share/locale/locale.alias" LANG="C.UTF8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" LEX="flex" MAKEOPTS="-j16" PKGDIR="/root/tbci/binpkg" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" SHELL="/bin/bash" USE="acl amd64 bzip2 cet cli crypt debug dri elogind fortran hardened hdf5 iconv ipv6 jumbo-build libtirpc native-symlinks ncurses nls nptl openmp pam pcre pie readline seccomp silex split-usr ssl ssp test-rust unicode xattr xtpax zlib" ABI_X86="64" ELIBC="musl" KERNEL="linux" Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS ############################## # emerge history (qlop -mv): # ############################## 2023-06-13T17:28:43 >>> sys-libs/mtdev-1.1.6 2023-06-13T17:28:46 >>> virtual/fortran-0-r1 2023-06-13T17:28:49 >>> net-dialup/lrzsz-0.12.20-r5 2023-06-13T17:28:52 >>> x11-libs/xcb-util-keysyms-0.4.1 2023-06-13T17:28:58 >>> x11-libs/xcb-util-renderutil-0.3.10 2023-06-13T17:28:55 >>> sci-libs/hdf5-1.14.1 2023-06-13T17:29:01 >>> x11-libs/xcb-util-wm-0.4.2 2023-06-13T17:29:04 >>> x11-libs/xcb-util-0.4.1 2023-06-13T17:29:07 >>> x11-misc/xkeyboard-config-2.38 2023-06-13T17:29:14 >>> media-libs/libglvnd-1.6.0 2023-06-13T17:29:17 >>> dev-libs/double-conversion-3.2.1 2023-06-13T17:29:10 >>> dev-libs/libevdev-1.13.1 2023-06-13T17:29:20 >>> dev-libs/icu-73.1-r2 2023-06-13T17:29:23 >>> sci-libs/libaec-1.0.6 2023-06-13T17:29:26 >>> x11-libs/xcb-util-image-0.4.1 2023-06-13T17:29:29 >>> app-text/docbook-xml-dtd-4.3-r2 2023-06-13T17:29:32 >>> dev-python/pygments-2.15.1 2023-06-13T17:29:37 >>> x11-libs/libxkbcommon-1.5.0 2023-06-13T17:29:50 >>> dev-libs/libinput-1.23.0 2023-06-13T17:30:01 >>> virtual/szip-2.1 2023-06-13T17:30:14 >>> dev-python/docutils-0.20.1 2023-06-13T17:30:36 >>> x11-libs/gdk-pixbuf-2.42.10-r1 2023-06-13T17:30:43 >>> dev-util/gtk-update-icon-cache-3.24.31 2023-06-13T17:29:57 >>> dev-qt/qtcore-5.15.10 2023-06-13T17:33:19 >>> dev-qt/qtxml-5.15.10 2023-06-13T17:34:19 >>> dev-qt/linguist-tools-5.15.10 2023-06-13T17:33:22 >>> dev-qt/qtgui-5.15.10 2023-06-13T17:36:56 >>> dev-qt/qtwidgets-5.15.10 ####################################### # installed packages (qlist -ICvUSS): # ####################################### acct-group/audio-0-r1:0 acct-group/cdrom-0-r1:0 acct-group/dialout-0-r1:0 acct-group/disk-0-r1:0 acct-group/floppy-0:0 acct-group/input-0-r1:0 acct-group/kmem-0-r1:0 acct-group/kvm-0-r1:0 acct-group/lp-0-r1:0 acct-group/man-0-r1:0 acct-group/messagebus-0-r1:0 acct-group/portage-0:0 acct-group/render-0-r1:0 acct-group/root-0:0 acct-group/sgx-0:0 acct-group/sshd-0-r1:0 acct-group/tape-0-r1:0 acct-group/tty-0-r1:0 acct-group/usb-0-r1:0 acct-group/video-0-r1:0 acct-user/man-1-r1:0 acct-user/messagebus-0-r1:0 acct-user/portage-0:0 acct-user/sshd-0-r1:0 app-admin/eselect-1.4.25:0 -doc -emacs -vim-syntax app-admin/perl-cleaner-2.30-r1:0 -pkgcore app-alternatives/awk-4:0 -busybox gawk -mawk -nawk split-usr app-alternatives/bc-0:0 -gh gnu app-alternatives/bzip2-1:0 -lbzip2 -pbzip2 reference split-usr app-alternatives/cpio-0:0 gnu -libarchive split-usr app-alternatives/gzip-0:0 -pigz reference split-usr app-alternatives/lex-0-r1:0 flex -reflex app-alternatives/sh-0:0 bash -busybox -dash -ksh -lksh -mksh app-alternatives/tar-0:0 gnu -libarchive split-usr app-alternatives/yacc-1-r2:0 bison -byacc -reference app-arch/bzip2-1.0.8-r4:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 split-usr -static -static-libs -verify-sig app-arch/cpio-2.14:0 nls app-arch/gzip-1.12-r4:0 -pic -static -verify-sig app-arch/libarchive-3.6.2-r1:0/13 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -blake2 bzip2 e2fsprogs -expat iconv -lz4 lzma -lzo -nettle -static-libs -verify-sig xattr -zstd app-arch/tar-1.34-r3:0 acl -minimal nls -selinux -verify-sig xattr app-arch/unzip-6.0_p27-r1:0 bzip2 -natspec unicode app-arch/xz-utils-5.4.3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc extra-filters nls split-usr -static-libs -verify-sig app-arch/zstd-1.5.5:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -lz4 lzma split-usr -static-libs -test zlib app-crypt/gnupg-2.4.2-r1:0 bzip2 -doc -ldap nls readline -selinux smartcard ssl -test tofu -tools -tpm -usb -user-socket -verify-sig -wks-server app-crypt/gpgme-1.20.0:1/11.6.15.2 -common-lisp cxx debug -python python_targets_python3_10 python_targets_python3_11 -qt5 -static-libs -test -verify-sig app-crypt/libb2-0.98.1-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -native-cflags openmp -static-libs app-crypt/libmd-1.0.4:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 app-crypt/pinentry-1.2.1-r3:0 -X -caps -efl -emacs -gtk -keyring ncurses -qt5 -verify-sig -wayland app-crypt/rhash-1.4.3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug nls ssl -static-libs app-editors/nano-7.2-r1:0 -debug -justify -magic -minimal ncurses nls spell -static unicode app-eselect/eselect-fontconfig-20220403:0 app-eselect/eselect-iptables-20220320:0 app-eselect/eselect-lib-bin-symlink-0.1.1-r1:0 app-eselect/eselect-pinentry-0.7.2-r1:0 app-misc/ca-certificates-20230311.3.90:0 -cacert app-misc/editor-wrapper-4-r1:0 app-misc/mime-types-2.1.54:0 -nginx app-misc/pax-utils-1.3.7:0 -caps -man -python -python_single_target_python3_10 python_single_target_python3_11 -seccomp -test app-misc/tmux-3.3a-r1:0 debug -selinux -systemd -utempter -vim-syntax app-portage/eix-0.36.7:0 debug -doc nls -sqlite app-portage/elt-patches-20221210:0 app-portage/gemato-20.4:0 gpg -pretty-log -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 -python_targets_python3_12 -test -tools app-portage/gentoolkit-0.6.1-r3:0 -python_targets_pypy3 python_targets_python3_10 python_targets_python3_11 -test app-portage/portage-utils-0.96:0 openmp qmanifest qtegrity -static app-shells/bash-5.2_p15-r3:0 -afs -bashlogger -examples -mem-scramble net nls -pgo -plugins readline -verify-sig app-shells/bash-completion-2.11:0 eselect -test app-shells/gentoo-bashcomp-20230313:0 app-shells/push-3.4:0 app-shells/quoter-4.2:0 app-text/ansifilter-2.18:0 -qt5 app-text/asciidoc-10.2.0:0 -python_single_target_pypy3 -python_single_target_python3_10 python_single_target_python3_11 app-text/build-docbook-catalog-2.4:0 app-text/docbook-xml-dtd-4.5-r2:4.5 app-text/docbook-xml-dtd-4.4-r3:4.4 app-text/docbook-xml-dtd-4.3-r2:4.3 app-text/docbook-xml-dtd-4.2-r3:4.2 app-text/docbook-xml-dtd-4.1.2-r7:4.1.2 app-text/docbook-xsl-ns-stylesheets-1.79.1:0 -ruby app-text/docbook-xsl-stylesheets-1.79.1-r4:0 -ruby app-text/manpager-1:0 app-text/sgml-common-0.6.3-r7:0 app-text/xmlto-0.0.28-r10:0 -latex text dev-db/sqlite-3.42.0:3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc -icu readline -secure-delete -static-libs -tcl -test -tools dev-lang/perl-5.36.1-r2:0/5.36 -berkdb debug -doc -gdbm ithreads -minimal -quadmath dev-lang/python-3.12.0_beta2:3.12 -bluetooth -build debug ensurepip -examples gdbm hardened -libedit -lto ncurses -pgo readline sqlite ssl -test -tk -valgrind -verify-sig dev-lang/python-3.11.4:3.11 -bluetooth -build debug ensurepip -examples gdbm hardened -libedit -lto ncurses -pgo readline sqlite 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-static-libs -test utils -verify-sig -zstd dev-libs/expat-2.5.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples -static-libs -test unicode dev-libs/glib-2.76.3:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dbus debug elf -gtk-doc mime -selinux -static-libs -sysprof -systemtap -test -utils xattr dev-libs/gmp-6.2.1-r5:0/10.4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cpudetection cxx -doc -pic -static-libs dev-libs/gobject-introspection-1.76.1:0 -doctool -gtk-doc -python_single_target_python3_10 python_single_target_python3_11 -test dev-libs/gobject-introspection-common-1.76.1:0 dev-libs/icu-73.1-r2:0/73.1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 debug -doc -examples -static-libs -test -verify-sig dev-libs/isl-0.24-r2:0/23 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-abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 x11-libs/xtrans-1.5.0:0 -doc x11-misc/compose-tables-1.8.5:0 x11-misc/shared-mime-info-2.2:0 -test x11-misc/xdg-utils-1.1.3_p20210805-r1:0 -dbus -doc -gnome x11-misc/xkeyboard-config-2.38:0 ####################### # build.log # ####################### * Using following Fortran compiler: * F77: x86_64-gentoo-linux-musl-gfortran * FC: x86_64-gentoo-linux-musl-gfortran >>> Unpacking source... >>> Unpacking silo-4.11-bsd.tgz to /var/tmp/portage/sci-libs/silo-4.11-r1/work >>> Source unpacked in /var/tmp/portage/sci-libs/silo-4.11-r1/work >>> Preparing source in /var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd ... * Applying silo-4.11-hdf5.patch ... [ ok ] * Applying silo-4.11-test-disable-largefile.patch ... [ ok ] * Applying silo-4.11-tests.patch ... patching file tests/Makefile.in Hunk #1 succeeded at 239 with fuzz 2 (offset 70 lines). patching file tests/testdtypes [ ok ] * Applying silo-4.11-testsuite-python-write.patch ... [ ok ] * Applying silo-4.11-widgets.patch ... [ ok ] * Applying silo-4.11-qtbindir.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd ... * econf: updating silo-4.11-bsd/config/config.sub with /usr/share/gnuconfig/config.sub * econf: updating silo-4.11-bsd/config/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-gentoo-linux-musl --host=x86_64-gentoo-linux-musl --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --datarootdir=/usr/share --disable-dependency-tracking --disable-silent-rules --disable-static --docdir=/usr/share/doc/silo-4.11-r1 --htmldir=/usr/share/doc/silo-4.11-r1/html --with-sysroot=/ --libdir=/usr/lib --enable-install-lite-headers --enable-shared --enable-silex --disable-browser --with-hdf5=/usr/include,/usr/lib checking for a BSD-compatible install... /usr/lib/portage/python3.11/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking build system type... x86_64-gentoo-linux-musl checking host system type... x86_64-gentoo-linux-musl checking what version the package is... 4.11 checking for site config host file... no checking for config-site x86_64-gentoo-linux-musl... no checking for config-site x86_64-gentoo-linux-musl... no checking for config-site gentoo-linux-musl... no checking for config-site gentoo-linux-musl... no checking for config-site x86_64-linux-musl... no checking for config-site x86_64-linux-musl... no checking for config-site x86_64-gentoo... no checking for config-site linux-musl... no checking for config-site linux-musl... no checking for config-site gentoo... no checking for config-site x86_64... found checking for x86_64-gentoo-linux-musl-g++... x86_64-gentoo-linux-musl-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether x86_64-gentoo-linux-musl-g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of x86_64-gentoo-linux-musl-g++... none checking for x86_64-gentoo-linux-musl-gcc... x86_64-gentoo-linux-musl-gcc checking whether we are using the GNU C compiler... yes checking whether x86_64-gentoo-linux-musl-gcc accepts -g... yes checking for x86_64-gentoo-linux-musl-gcc option to accept ISO C89... none needed checking whether x86_64-gentoo-linux-musl-gcc understands -c and -o together... yes checking dependency style of x86_64-gentoo-linux-musl-gcc... none checking how to run the C preprocessor... x86_64-gentoo-linux-musl-gcc -E checking for x86_64-gentoo-linux-musl-gfortran... x86_64-gentoo-linux-musl-gfortran checking whether we are using the GNU Fortran compiler... yes checking whether x86_64-gentoo-linux-musl-gfortran accepts -g... yes checking for x86_64-gentoo-linux-musl-g77... x86_64-gentoo-linux-musl-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-gentoo-linux-musl-gfortran accepts -g... yes checking how to get verbose linking output from x86_64-gentoo-linux-musl-gfortran... -v checking for Fortran libraries of x86_64-gentoo-linux-musl-gfortran... -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../.. -lgfortran -lm -lssp_nonshared -lquadmath checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether make sets $(MAKE)... (cached) yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-gentoo-linux-musl-gcc... /usr/x86_64-gentoo-linux-musl/bin/ld checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-gentoo-linux-musl-nm -B checking the name lister (/usr/bin/x86_64-gentoo-linux-musl-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 98304 checking how to convert x86_64-gentoo-linux-musl file names to x86_64-gentoo-linux-musl format... func_convert_file_noop checking how to convert x86_64-gentoo-linux-musl file names to toolchain format... func_convert_file_noop checking for /usr/x86_64-gentoo-linux-musl/bin/ld option to reload object files... -r checking for x86_64-gentoo-linux-musl-objdump... x86_64-gentoo-linux-musl-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-gentoo-linux-musl-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-gentoo-linux-musl-ar... x86_64-gentoo-linux-musl-ar checking for archiver @FILE support... @ checking for x86_64-gentoo-linux-musl-strip... x86_64-gentoo-linux-musl-strip checking for x86_64-gentoo-linux-musl-ranlib... x86_64-gentoo-linux-musl-ranlib checking command to parse /usr/bin/x86_64-gentoo-linux-musl-nm -B output from x86_64-gentoo-linux-musl-gcc object... ok checking for sysroot... / checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-gentoo-linux-musl-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-gentoo-linux-musl-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-gentoo-linux-musl-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-gentoo-linux-musl-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-gentoo-linux-musl-gcc static flag -static works... yes checking if x86_64-gentoo-linux-musl-gcc supports -c -o file.o... yes checking if x86_64-gentoo-linux-musl-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-gentoo-linux-musl-gcc linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... x86_64-gentoo-linux-musl-g++ -E checking for ld used by x86_64-gentoo-linux-musl-g++... /usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-gentoo-linux-musl-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-gentoo-linux-musl-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-gentoo-linux-musl-g++ static flag -static works... yes checking if x86_64-gentoo-linux-musl-g++ supports -c -o file.o... yes checking if x86_64-gentoo-linux-musl-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-gentoo-linux-musl-gfortran option to produce PIC... -fPIC checking if x86_64-gentoo-linux-musl-gfortran PIC flag -fPIC works... yes checking if x86_64-gentoo-linux-musl-gfortran static flag -static works... yes checking if x86_64-gentoo-linux-musl-gfortran supports -c -o file.o... yes checking if x86_64-gentoo-linux-musl-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-gentoo-linux-musl-gfortran linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-gentoo-linux-musl-gfortran option to produce PIC... -fPIC checking if x86_64-gentoo-linux-musl-gfortran PIC flag -fPIC works... yes checking if x86_64-gentoo-linux-musl-gfortran static flag -static works... yes checking if x86_64-gentoo-linux-musl-gfortran supports -c -o file.o... yes checking if x86_64-gentoo-linux-musl-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-gentoo-linux-musl-gfortran linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library containing strerror... none required checking for hzip... hzip compression not available in BSD version checking for fpzip... fpzip compression not available in BSD version checking for zfp... found checking compiler optimization... disabled checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes checking whether C compiler accepts "-Wdeclaration-after-statement"... yes checking size of off64_t... 8 checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/stat.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/fcntl.h usability... yes checking sys/fcntl.h presence... yes checking for sys/fcntl.h... yes checking fnmatch.h usability... yes checking fnmatch.h presence... yes checking for fnmatch.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for ANSI C header files... (cached) yes checking for fclose function pointer... yes checking for fflush function pointer... yes checking for fopen function pointer... yes checking for fprintf function pointer... yes checking for fread function pointer... yes checking for fseek function pointer... yes checking for setvbuf function pointer... yes checking for ftell function pointer... yes checking for fwrite function pointer... yes checking for memmove... yes checking for fnmatch... yes checking for isnan... no checking for fpclass... no checking for strerror... yes checking if setjmp and longjmp work... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for Qt... Info: creating stash file /var/tmp/portage/sci-libs/silo-4.11-r1/temp/tmp.3fhXzhQipx/.qmake.stash rmdir: failed to remove '/var/tmp/portage/sci-libs/silo-4.11-r1/temp/tmp.3fhXzhQipx': Directory not empty yes: QT_CXXFLAGS=-pipe -O2 -Wall -Wextra -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB -I. -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I. -I/usr/lib/qt5/mkspecs/linux-g++ QT_DIR=/usr/lib QT_LIBS=/usr/lib/libQt5Widgets.so /usr/lib/libQt5Gui.so /usr/lib/libQt5Core.so -lGL -pthread QT_UIC=/usr/lib/qt5/bin/uic QT_MOC=/usr/lib/qt5/bin/moc QT_RCC=/usr/lib/qt5/bin/rcc QT_LRELEASE=/usr/lib/qt5/bin/lrelease QT_LUPDATE=/usr/lib/qt5/bin/lupdate checking correct functioning of Qt installation... success checking for cos in -lm... yes checking for szlib... suppressed checking for hdf5... configure: checking for hdf5 and supporting libraries... checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5open... yes checking for a readline compatible library... -lreadline checking readline.h usability... no checking readline.h presence... no checking for readline.h... no checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking whether readline supports history... yes checking history.h usability... no checking history.h presence... no checking for history.h... no checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating SiloWindows/Makefile config.status: creating svn_bin/Makefile config.status: creating config/Makefile config.status: creating config-site/Makefile config.status: creating docs/Makefile config.status: creating src/Makefile config.status: creating src/score/Makefile config.status: creating src/pdb/Makefile config.status: creating src/silo/Makefile config.status: creating src/silo/silo.h config.status: creating src/debug/Makefile config.status: creating src/netcdf/Makefile config.status: creating src/pdb_drv/Makefile config.status: creating src/pdbp_drv/Makefile config.status: creating src/hdf5_drv/Makefile config.status: creating src/taurus/Makefile config.status: creating src/unknown/Makefile config.status: creating src/filters/Makefile config.status: creating tests/Makefile config.status: creating tools/Makefile config.status: creating tools/browser/Makefile config.status: creating tools/python/Makefile config.status: creating tools/silex/Makefile config.status: creating tools/silock/Makefile config.status: creating tools/json/Makefile config.status: creating tools/mapred/Makefile config.status: creating src/zfp-0.5.5/Makefile config.status: creating src/libsiloh5.settings config.status: creating config.h config.status: executing tests/atconfig commands config.status: executing depfiles commands config.status: executing libtool commands SUMMARY OF THE Silo with HDF5 CONFIGURATION ================================= Silo Version: 4.11 Configured on: Tue Jun 13 17:39:16 UTC 2023 Configure command: ./configure '--prefix=/usr' '--build=x86_64-gentoo-linux-musl' '--host=x86_64-gentoo-linux-musl' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--datarootdir=/usr/share' '--disable-dependency-tracking' '--disable-silent-rules' '--disable-static' '--docdir=/usr/share/doc/silo-4.11-r1' '--htmldir=/usr/share/doc/silo-4.11-r1/html' '--with-sysroot=/' '--libdir=/usr/lib' '--enable-install-lite-headers' '--enable-shared' '--enable-silex' '--disable-browser' '--with-hdf5=/usr/include,/usr/lib' 'build_alias=x86_64-gentoo-linux-musl' 'host_alias=x86_64-gentoo-linux-musl' 'CXXFLAGS=-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' 'LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' 'CFLAGS=-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' 'FC=x86_64-gentoo-linux-musl-gfortran' 'FCFLAGS=-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -fallow-argument-mismatch' 'F77=x86_64-gentoo-linux-musl-gfortran' 'FFLAGS=-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -fallow-argument-mismatch' Host system: x86_64-gentoo-linux-musl Build system: x86_64-gentoo-linux-musl Installation point: /usr Source directory: @UsingSrcDir@ Archiver: x86_64-gentoo-linux-musl-ar Ranlib: x86_64-gentoo-linux-musl-ranlib Configure Summary Compiling Options: C Compiler /usr/bin/x86_64-gentoo-linux-musl-gcc CPPFLAGS -I/usr/include CFLAGS -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement LDFLAGS -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 LIBS -lhdf5 -lm Languages: C++ Compiler /usr/bin/x86_64-gentoo-linux-musl-g++ CXXFLAGS -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 Fortran Compiler /usr/bin/x86_64-gentoo-linux-musl-gfortran FCFLAGS -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -fallow-argument-mismatch FCLIBS -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/13/../../.. -lgfortran -lm -lssp_nonshared -lquadmath Features: Browser @UsingBrowser@ Readline @UsingReadline@ HDF5 @UsingHDF5@ Silex @UsingSilex@ Qt @UsingQt@ Qt moc Compiler /usr/lib/qt5/bin/moc Qt CXXFLAGS -pipe -O2 -Wall -Wextra -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB -I. -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I. -I/usr/lib/qt5/mkspecs/linux-g++ Qt LIBS /usr/lib/libQt5Widgets.so /usr/lib/libQt5Gui.so /usr/lib/libQt5Core.so -lGL -pthread Python @UsingPython@ Python Compiler Python CPPFLAGS >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd ... make -j16 make all-recursive make[1]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd' Making all in . make[2]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd' make[2]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd' Making all in src make[2]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src' make all-recursive make[3]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src' Making all in score make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/score' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o memmove.lo memmove.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scctla.lo scctla.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scctl.lo scctl.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o schash.lo schash.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o scstr.lo scstr.c if test ! -e lite_score.h; then ../../config/mklite score.h lite_score.h; fi libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c schash.c -fPIC -DPIC -o .libs/schash.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctla.c -fPIC -DPIC -o .libs/scctla.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c memmove.c -fPIC -DPIC -o .libs/memmove.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scstr.c -fPIC -DPIC -o .libs/scstr.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c scctl.c -fPIC -DPIC -o .libs/scctl.o /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_score.la memmove.lo scctla.lo scctl.lo schash.lo scstr.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_score.a .libs/memmove.o .libs/scctla.o .libs/scctl.o .libs/schash.o .libs/scstr.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_score.a libtool: link: ( cd ".libs" && rm -f "libsilo_score.la" && ln -s "../libsilo_score.la" "libsilo_score.la" ) make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/score' Making all in pdb make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb' x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o detect.o detect.c x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -o detect detect.o ./detect >> pdform.h make all-am make[5]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdb.lo pdb.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbdir.lo pdbdir.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbio.lo pdbio.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbmm.lo pdbmm.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdbx.lo pdbx.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdconv.lo pdconv.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdlow.lo pdlow.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdmemb.lo pdmemb.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdpath.lo pdpath.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o pdrdwr.lo pdrdwr.c if test ! -e lite_pdb.h; then ../../config/mklite pdb.h lite_pdb.h; fi libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbx.c -fPIC -DPIC -o .libs/pdbx.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbio.c -fPIC -DPIC -o .libs/pdbio.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbmm.c -fPIC -DPIC -o .libs/pdbmm.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdlow.c -fPIC -DPIC -o .libs/pdlow.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdb.c -fPIC -DPIC -o .libs/pdb.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdbdir.c -fPIC -DPIC -o .libs/pdbdir.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdconv.c -fPIC -DPIC -o .libs/pdconv.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdpath.c -fPIC -DPIC -o .libs/pdpath.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdmemb.c -fPIC -DPIC -o .libs/pdmemb.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c pdrdwr.c -fPIC -DPIC -o .libs/pdrdwr.o pdb.c:1809:2: warning: #warning MOVE TO PDLOW.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1809 | #warning MOVE TO PDLOW.C | ^~~~~~~ pdb.c:1815:2: warning: #warning MOVE TO PDMEMB.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1815 | #warning MOVE TO PDMEMB.C | ^~~~~~~ pdb.c:1821:2: warning: #warning MOVE TO PDLOW.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1821 | #warning MOVE TO PDLOW.C | ^~~~~~~ pdb.c:1870:2: warning: #warning MOVE TO PDLOW.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1870 | #warning MOVE TO PDLOW.C | ^~~~~~~ pdb.c:1877:2: warning: #warning MOVE TO PDLOW.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1877 | #warning MOVE TO PDLOW.C | ^~~~~~~ pdb.c:1885:2: warning: #warning MOVE TO PDBDIR.C [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1885 | #warning MOVE TO PDBDIR.C | ^~~~~~~ pdb.c: In function 'lite_PD_ln': pdb.c:1890:2: warning: #warning MAYBE INCREASE MAXLINE FOR LEOSPACT [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1890 | #warning MAYBE INCREASE MAXLINE FOR LEOSPACT | ^~~~~~~ pdb.c: At top level: pdb.c:1965:2: warning: #warning SHOULD GO IN PDBMM.c [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1965 | #warning SHOULD GO IN PDBMM.c | ^~~~~~~ /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_pdb.la pdb.lo pdbdir.lo pdbio.lo pdbmm.lo pdbx.lo pdconv.lo pdlow.lo pdmemb.lo pdpath.lo pdrdwr.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_pdb.a .libs/pdb.o .libs/pdbdir.o .libs/pdbio.o .libs/pdbmm.o .libs/pdbx.o .libs/pdconv.o .libs/pdlow.o .libs/pdmemb.o .libs/pdpath.o .libs/pdrdwr.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_pdb.a libtool: link: ( cd ".libs" && rm -f "libsilo_pdb.la" && ln -s "../libsilo_pdb.la" "libsilo_pdb.la" ) make[5]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb' make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb' Making all in silo make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/silo' make all-am make[5]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/silo' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o alloc.lo alloc.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o extface.lo extface.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo.lo silo.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_ns.lo silo_ns.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o utils.lo utils.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_f.lo silo_f.c libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_ns.c -fPIC -DPIC -o .libs/silo_ns.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c extface.c -fPIC -DPIC -o .libs/extface.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c alloc.c -fPIC -DPIC -o .libs/alloc.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c utils.c -fPIC -DPIC -o .libs/utils.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo.c -fPIC -DPIC -o .libs/silo.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_f.c -fPIC -DPIC -o .libs/silo_f.o silo.c:74:2: warning: #warning SIMPLIFY HEADER INCLUSION LOGIC [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 74 | #warning SIMPLIFY HEADER INCLUSION LOGIC | ^~~~~~~ In file included from silo.c:96: /usr/include/sys/errno.h:1:2: warning: #warning redirecting incorrect #include to [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1 | #warning redirecting incorrect #include to | ^~~~~~~ In file included from silo.c:106: /usr/include/sys/fcntl.h:1:2: warning: #warning redirecting incorrect #include to [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1 | #warning redirecting incorrect #include to | ^~~~~~~ alloc.c: In function 'DBIsEmptyQuadmesh': alloc.c:909:2: warning: #warning CHECK THIS LOGIC. IF ANY DIM>0, IT IS NOT EMPTY [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 909 | #warning CHECK THIS LOGIC. IF ANY DIM>0, IT IS NOT EMPTY | ^~~~~~~ silo.c:229:2: warning: #warning REDUCE USE OF THIS CONSTRUCT [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 229 | #warning REDUCE USE OF THIS CONSTRUCT | ^~~~~~~ silo.c:287:2: warning: #warning FIX THIS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 287 | #warning FIX THIS | ^~~~~~~ alloc.c: In function 'DBIsEmptyQuadvar': alloc.c:1354:2: warning: #warning CHECK THIS LOGIC [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1354 | #warning CHECK THIS LOGIC | ^~~~~~~ silo.c: In function 'db_FreeToc': silo.c:1129:2: warning: #warning WE SHOULD PROBABLY JUST EITHER MAKE THIS CONSISTENT OR PERHAPS COPY ALL CHARS INTO LINK@TARGET format [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1129 | #warning WE SHOULD PROBABLY JUST EITHER MAKE THIS CONSISTENT OR PERHAPS COPY ALL CHARS INTO LINK@TARGET format | ^~~~~~~ silo.c: In function 'DBLs': silo.c:1734:2: warning: #warning CLEAN UP IS LOST IN ABOVE EARLY RETURNS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1734 | #warning CLEAN UP IS LOST IN ABOVE EARLY RETURNS | ^~~~~~~ silo.c: At top level: silo.c:2535:2: warning: #warning WHAT ABOUT FORCESINGLE SHOWERRORS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 2535 | #warning WHAT ABOUT FORCESINGLE SHOWERRORS | ^~~~~~~ silo.c: In function 'DBGrabDriver': silo.c:2844:2: warning: #warning FIX GLOBAL LOCK [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 2844 | #warning FIX GLOBAL LOCK | ^~~~~~~ silo.c: At top level: silo.c:3585:2: warning: #warning ADD DBSHOWERRORSFILE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3585 | #warning ADD DBSHOWERRORSFILE | ^~~~~~~ silo.c: In function 'DBShowErrors': silo.c:3600:2: warning: #warning GET RID OF SUSPEND/RESUME STUFF [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3600 | #warning GET RID OF SUSPEND/RESUME STUFF | ^~~~~~~ silo.c: In function 'db_InitFileGlobals': silo.c:3974:2: warning: #warning ADD compressionMinSize [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3974 | #warning ADD compressionMinSize | ^~~~~~~ silo.c:3976:2: warning: #warning CORRECT INITIALIZATION OF compressionErrmode [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3976 | #warning CORRECT INITIALIZATION OF compressionErrmode | ^~~~~~~ silo.c:3979:61: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wdiscarded-qualifiers]] 3979 | dbfile->pub.file_scope_globals->compressionParams = DB_CHAR_PTR_NOT_SET; | ^ silo.c: In function 'DBClose': silo.c:4416:2: warning: #warning IS ORDER OF OPS CORRECT HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 4416 | #warning IS ORDER OF OPS CORRECT HERE | ^~~~~~~ silo.c: In function 'db_validate_copy_step': silo.c:5839:2: warning: #warning ONLY IF SRC SIZE SMALLER THAN DST SIZE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5839 | #warning ONLY IF SRC SIZE SMALLER THAN DST SIZE | ^~~~~~~ silo.c: In function 'db_can_overwrite_dstobj_with_srcobj': silo.c:5897:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wdeclaration-after-statement]] 5897 | char const *curr_compname = srcObj->comp_names[q]; | ^~~~ silo.c:5934:2: warning: #warning SHOULDNT WE USE FILE LENGTH FUNCTIONS HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5934 | #warning SHOULDNT WE USE FILE LENGTH FUNCTIONS HERE | ^~~~~~~ silo.c:5944:2: warning: #warning DISALLOW SIMLINKS FOR NOW [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5944 | #warning DISALLOW SIMLINKS FOR NOW | ^~~~~~~ silo.c: In function 'db_copy_single_object_abspath': silo.c:6010:2: warning: #warning CHECK ARGS HERE. ALLOW FOR NULL dstFile AND dstObjAbsName [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6010 | #warning CHECK ARGS HERE. ALLOW FOR NULL dstFile AND dstObjAbsName | ^~~~~~~ silo.c:6011:2: warning: #warning WHY CHECK dstType HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6011 | #warning WHY CHECK dstType HERE | ^~~~~~~ silo.c:6038:2: warning: #warning USE FILE-BASED FUNCTION WHEN AVAILABLE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6038 | #warning USE FILE-BASED FUNCTION WHEN AVAILABLE | ^~~~~~~ silo.c: In function 'DBCp': silo.c:6253:2: warning: #warning WHAT ABOUT API MACROS. MAYBE NOT NEEDED SINCE NOT CALLING DOWN INTO DRIVERS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6253 | #warning WHAT ABOUT API MACROS. MAYBE NOT NEEDED SINCE NOT CALLING DOWN INTO DRIVERS | ^~~~~~~ silo.c:6254:2: warning: #warning WHAT ABOUT -f (force) OPTION [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6254 | #warning WHAT ABOUT -f (force) OPTION | ^~~~~~~ silo.c:6273:2: warning: #warning WARN ABOUT CERTAIN OPTIONS NOT YET SUPPORTED [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6273 | #warning WARN ABOUT CERTAIN OPTIONS NOT YET SUPPORTED | ^~~~~~~ silo.c:6359:2: warning: #warning FIX LEAKS WITH EARLY RETURN HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6359 | #warning FIX LEAKS WITH EARLY RETURN HERE | ^~~~~~~ silo.c:6466:18: warning: passing argument 1 of 'free' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wdiscarded-qualifiers]] 6466 | free(srcDirBaseName); | ^~~~~~~~~~~~~~ In file included from silo.c:83: /usr/include/stdlib.h:43:12: note: expected 'void *' but argument is of type 'const char *' 43 | void free (void *); | ^~~~~~ silo.c: In function 'DBGetPartialObject': silo.c:6644:2: warning: #warning FIX THIS METHOD [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6644 | #warning FIX THIS METHOD | ^~~~~~~ silo.c: At top level: silo.c:8164:2: warning: #warning DO WE NEED THIS METHOD [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8164 | #warning DO WE NEED THIS METHOD | ^~~~~~~ silo.c: In function 'DBPutMaterial': silo.c:8939:2: warning: #warning BETTER PLACE TO NULL THESE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8939 | #warning BETTER PLACE TO NULL THESE | ^~~~~~~ silo.c: In function 'DBPutMultimat': silo.c:9338:2: warning: #warning BETTER PLACE TO NULL THESE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 9338 | #warning BETTER PLACE TO NULL THESE | ^~~~~~~ silo.c: In function 'DBPutZonelist2': silo.c:10330:2: warning: #warning HI AND LO OFFSET NOT VALID IN PRESENCE OF EXPLICIT GHOST LABELS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 10330 | #warning HI AND LO OFFSET NOT VALID IN PRESENCE OF EXPLICIT GHOST LABELS | ^~~~~~~ silo.c: In function 'DBStringArrayToStringList': silo.c:13312:2: warning: #warning TEST THIS LOGIC [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 13312 | #warning TEST THIS LOGIC | ^~~~~~~ /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_silo.la alloc.lo extface.lo silo.lo silo_ns.lo utils.lo silo_f.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_silo.a .libs/alloc.o .libs/extface.o .libs/silo.o .libs/silo_ns.o .libs/utils.o .libs/silo_f.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_silo.a libtool: link: ( cd ".libs" && rm -f "libsilo_silo.la" && ln -s "../libsilo_silo.la" "libsilo_silo.la" ) make[5]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/silo' make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/silo' Making all in debug make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/debug' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_debug.lo silo_debug.c libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_debug.c -fPIC -DPIC -o .libs/silo_debug.o /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_debug.la silo_debug.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_debug.a .libs/silo_debug.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_debug.a libtool: link: ( cd ".libs" && rm -f "libsilo_debug.la" && ln -s "../libsilo_debug.la" "libsilo_debug.la" ) make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/debug' Making all in netcdf make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/netcdf' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o api.lo api.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o ent.lo ent.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o netcdf.lo netcdf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o obj.lo obj.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_netcdf.lo silo_netcdf.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o table.lo table.c libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_netcdf.c -fPIC -DPIC -o .libs/silo_netcdf.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c netcdf.c -fPIC -DPIC -o .libs/netcdf.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c ent.c -fPIC -DPIC -o .libs/ent.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c api.c -fPIC -DPIC -o .libs/api.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c table.c -fPIC -DPIC -o .libs/table.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c obj.c -fPIC -DPIC -o .libs/obj.o /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_netcdf.la api.lo ent.lo netcdf.lo obj.lo silo_netcdf.lo table.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_netcdf.a .libs/api.o .libs/ent.o .libs/netcdf.o .libs/obj.o .libs/silo_netcdf.o .libs/table.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_netcdf.a libtool: link: ( cd ".libs" && rm -f "libsilo_netcdf.la" && ln -s "../libsilo_netcdf.la" "libsilo_netcdf.la" ) make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/netcdf' Making all in pdb_drv make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb_drv' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_pdb.lo silo_pdb.c libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_pdb.c -fPIC -DPIC -o .libs/silo_pdb.o /bin/sh ../../libtool --tag=CC --mode=link x86_64-gentoo-linux-musl-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libsilo_pdb_drv.la silo_pdb.lo -lhdf5 -lm libtool: link: x86_64-gentoo-linux-musl-ar cru .libs/libsilo_pdb_drv.a .libs/silo_pdb.o libtool: link: x86_64-gentoo-linux-musl-ranlib .libs/libsilo_pdb_drv.a libtool: link: ( cd ".libs" && rm -f "libsilo_pdb_drv.la" && ln -s "../libsilo_pdb_drv.la" "libsilo_pdb_drv.la" ) make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/pdb_drv' Making all in hdf5_drv make[4]: Entering directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/hdf5_drv' /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o silo_hdf5.lo silo_hdf5.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o H5FDsilo.lo H5FDsilo.c /bin/sh ../../libtool --tag=CC --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c -o H5Zzfp.lo H5Zzfp.c libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c silo_hdf5.c -fPIC -DPIC -o .libs/silo_hdf5.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c H5Zzfp.c -fPIC -DPIC -o .libs/H5Zzfp.o libtool: compile: x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -DH5_HAVE_FILTER_ZFP -DH5Z_ZFP_AS_LIB -DAS_SILO_BUILTIN -I./../zfp-0.5.5/include -I/usr/include -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -c H5FDsilo.c -fPIC -DPIC -o .libs/H5FDsilo.o silo_hdf5.c:61:2: warning: #warning DO WE NEED THIS HEADER FILE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 61 | #warning DO WE NEED THIS HEADER FILE | ^~~~~~~ H5FDsilo.c:500:2: warning: #warning REMOVE ME [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 500 | #warning REMOVE ME | ^~~~~~~ H5FDsilo.c:544:5: warning: initialization of 'unsigned int' from 'char *' makes integer from pointer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] 544 | "silo", /*name */ | ^~~~~~ H5FDsilo.c:544:5: note: (near initialization for 'H5FD_silo_g.version') H5FDsilo.c:544:5: error: initializer element is not computable at load time H5FDsilo.c:544:5: note: (near initialization for 'H5FD_silo_g.version') H5FDsilo.c:463:17: warning: overflow in conversion from 'long unsigned int' to 'int' changes value from '9223372036854775807' to '-1' [-Woverflow[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Woverflow]] 463 | #define MAXADDR (((haddr_t)1<<(8*sizeof(file_offset_t)-1))-1) | ^ H5FDsilo.c:545:5: note: in expansion of macro 'MAXADDR' 545 | MAXADDR, /*maxaddr */ | ^~~~~~~ H5FDsilo.c:546:5: warning: initialization of 'const char *' from 'int' makes pointer from integer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] 546 | H5F_CLOSE_WEAK, /* fc_degree */ | ^~~~~~~~~~~~~~ H5FDsilo.c:546:5: note: (near initialization for 'H5FD_silo_g.name') H5FDsilo.c:550:5: error: incompatible types when initializing type 'enum H5F_close_degree_t' using type 'hsize_t (*)(H5FD_t *)' {aka 'long unsigned int (*)(H5FD_t *)'} 550 | H5FD_silo_sb_size, /*sb_size */ | ^~~~~~~~~~~~~~~~~ H5FDsilo.c:551:5: warning: initialization of 'herr_t (*)(void)' {aka 'int (*)(void)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, char *, unsigned char *)' {aka 'int (*)(H5FD_t *, char *, unsigned char *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 551 | H5FD_silo_sb_encode, /*sb_encode */ | ^~~~~~~~~~~~~~~~~~~ H5FDsilo.c:551:5: note: (near initialization for 'H5FD_silo_g.terminate') H5FDsilo.c:552:5: warning: initialization of 'hsize_t (*)(H5FD_t *)' {aka 'long unsigned int (*)(H5FD_t *)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, const char *, const unsigned char *)' {aka 'int (*)(H5FD_t *, const char *, const unsigned char *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 552 | H5FD_silo_sb_decode, /*sb_decode */ | ^~~~~~~~~~~~~~~~~~~ H5FDsilo.c:552:5: note: (near initialization for 'H5FD_silo_g.sb_size') H5FDsilo.c:555:5: warning: initialization of 'long unsigned int' from 'void *' makes integer from pointer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] 555 | NULL, /*fapl_copy */ | ^~~~ H5FDsilo.c:555:5: note: (near initialization for 'H5FD_silo_g.fapl_size') H5FDsilo.c:559:5: warning: initialization of 'long unsigned int' from 'void *' makes integer from pointer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] 559 | NULL, /*dxpl_free */ | ^~~~ H5FDsilo.c:559:5: note: (near initialization for 'H5FD_silo_g.dxpl_size') H5FDsilo.c:560:5: warning: initialization of 'void * (*)(const void *)' from incompatible pointer type 'H5FD_t * (*)(const char *, unsigned int, hid_t, haddr_t)' {aka 'H5FD_t * (*)(const char *, unsigned int, long int, long unsigned int)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 560 | H5FD_silo_open, /*open */ | ^~~~~~~~~~~~~~ H5FDsilo.c:560:5: note: (near initialization for 'H5FD_silo_g.dxpl_copy') H5FDsilo.c:561:5: warning: initialization of 'herr_t (*)(void *)' {aka 'int (*)(void *)'} from incompatible pointer type 'herr_t (*)(H5FD_t *)' {aka 'int (*)(H5FD_t *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 561 | H5FD_silo_close, /*close */ | ^~~~~~~~~~~~~~~ H5FDsilo.c:561:5: note: (near initialization for 'H5FD_silo_g.dxpl_free') H5FDsilo.c:562:5: warning: initialization of 'H5FD_t * (*)(const char *, unsigned int, hid_t, haddr_t)' {aka 'H5FD_t * (*)(const char *, unsigned int, long int, long unsigned int)'} from incompatible pointer type 'int (*)(const H5FD_t *, const H5FD_t *)' [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 562 | H5FD_silo_cmp, /*cmp */ | ^~~~~~~~~~~~~ H5FDsilo.c:562:5: note: (near initialization for 'H5FD_silo_g.open') H5FDsilo.c:563:5: warning: initialization of 'herr_t (*)(H5FD_t *)' {aka 'int (*)(H5FD_t *)'} from incompatible pointer type 'herr_t (*)(const H5FD_t *, long unsigned int *)' {aka 'int (*)(const H5FD_t *, long unsigned int *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 563 | H5FD_silo_query, /*query */ | ^~~~~~~~~~~~~~~ H5FDsilo.c:563:5: note: (near initialization for 'H5FD_silo_g.close') H5FDsilo.c:567:5: warning: initialization of 'haddr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, hsize_t)' {aka 'long unsigned int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int)'} from incompatible pointer type 'haddr_t (*)(const H5FD_t *, H5FD_mem_t)' {aka 'long unsigned int (*)(const H5FD_t *, enum H5F_mem_t)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 567 | H5FD_silo_get_eoa, /*get_eoa */ | ^~~~~~~~~~~~~~~~~ H5FDsilo.c:567:5: note: (near initialization for 'H5FD_silo_g.alloc') H5FDsilo.c:568:5: warning: initialization of 'herr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, haddr_t, hsize_t)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int, long unsigned int)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, H5FD_mem_t, haddr_t)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long unsigned int)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 568 | H5FD_silo_set_eoa, /*set_eoa */ | ^~~~~~~~~~~~~~~~~ H5FDsilo.c:568:5: note: (near initialization for 'H5FD_silo_g.free') H5FDsilo.c:570:5: warning: initialization of 'herr_t (*)(H5FD_t *, H5FD_mem_t, haddr_t)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long unsigned int)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, hid_t, void **)' {aka 'int (*)(H5FD_t *, long int, void **)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 570 | H5FD_silo_get_handle, /*get_handle */ | ^~~~~~~~~~~~~~~~~~~~ H5FDsilo.c:570:5: note: (near initialization for 'H5FD_silo_g.set_eoa') H5FDsilo.c:571:5: warning: initialization of 'haddr_t (*)(const H5FD_t *, H5FD_mem_t)' {aka 'long unsigned int (*)(const H5FD_t *, enum H5F_mem_t)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, haddr_t, size_t, void *)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int, long unsigned int, void *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 571 | H5FD_silo_read, /*read */ | ^~~~~~~~~~~~~~ H5FDsilo.c:571:5: note: (near initialization for 'H5FD_silo_g.get_eof') H5FDsilo.c:572:5: warning: initialization of 'herr_t (*)(H5FD_t *, hid_t, void **)' {aka 'int (*)(H5FD_t *, long int, void **)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, haddr_t, size_t, const void *)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int, long unsigned int, const void *)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 572 | H5FD_silo_write, /*write */ | ^~~~~~~~~~~~~~~ H5FDsilo.c:572:5: note: (near initialization for 'H5FD_silo_g.get_handle') H5FDsilo.c:574:5: warning: initialization of 'herr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, haddr_t, size_t, const void *)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int, long unsigned int, const void *)'} from incompatible pointer type 'herr_t (*)(H5FD_t *, hid_t, hbool_t)' {aka 'int (*)(H5FD_t *, long int, _Bool)'} [-Wincompatible-pointer-types[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wincompatible-pointer-types]] 574 | H5FD_silo_truncate, /*truncate */ | ^~~~~~~~~~~~~~~~~~ H5FDsilo.c:574:5: note: (near initialization for 'H5FD_silo_g.write') H5FDsilo.c:577:5: warning: braces around scalar initializer 577 | H5FD_FLMAP_SINGLE /*fl_map */ | ^~~~~~~~~~~~~~~~~ H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: initialization of 'herr_t (*)(H5FD_t *, H5FD_mem_t, hid_t, size_t, hid_t *, hid_t *, haddr_t *, size_t *, void **)' {aka 'int (*)(H5FD_t *, enum H5F_mem_t, long int, long unsigned int, long int *, long int *, long unsigned int *, long unsigned int *, void **)'} from 'int' makes pointer from integer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') H5FDsilo.c:577:5: warning: excess elements in scalar initializer H5FDsilo.c:577:5: note: (near initialization for 'H5FD_silo_g.read_selection') In file included from silo_hdf5.c:74: silo_hdf5_private.h:110:2: warning: #warning REMOVE db_hdf5_CpListedObjects [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 110 | #warning REMOVE db_hdf5_CpListedObjects | ^~~~~~~ In file included from silo_hdf5_private.h:67: silo_hdf5.c: In function 'db_hdf5_get_obj_dsnames': silo_hdf5.c:1812:45: warning: passing argument 1 of '_db_safe_strdup' makes pointer from integer without a cast [-Wint-conversion[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wint-conversion]] 1812 | (*dsnames)[i] = strdup(m.MEMNAME[i]); \ | ~~~~~~~~~^~~ | | | char ./../silo/silo_private.h:939:35: note: in definition of macro 'strdup' 939 | #define strdup(s) _db_safe_strdup(s) | ^ silo_hdf5.c:1869:13: note: in expansion of macro 'DB_OBJ_CASE' 1869 | DB_OBJ_CASE(DB_CURVE, DBcurve_mt, npts?1:1, yvarname) | ^~~~~~~~~~~ H5FDsilo.c: In function 'H5FD_silo_close': In file included from ./../silo/silo_private.h:79: ./../silo/silo.h:2214:56: note: expected 'const char *' but argument is of type 'char' 2214 | SILO_API extern char * _db_safe_strdup(const char *); | ^~~~~~~~~~~~ H5FDsilo.c:1627:40: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1627 | fprintf(logf, "block size = %llu\n", file->block_size); | ~~~^ ~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1630:42: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1630 | fprintf(logf, "max block id = %llu\n", file->stats.max_block_id); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1631:47: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1631 | fprintf(logf, "max blocks in mem = %llu\n", file->stats.max_blocks_in_mem); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1633:41: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1633 | fprintf(logf, "total seeks = %llu\n", file->stats.total_seeks); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu silo_hdf5.c: In function 'db_hdf5_init': H5FDsilo.c:1635:58: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1635 | fprintf(logf, "number of multi-block writes = %llu\n", file->stats.num_multiblock_writes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu silo_hdf5.c:2173:5: warning: implicit declaration of function 'zfp_init_zfp' [-Wimplicit-function-declaration[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wimplicit-function-declaration]] 2173 | zfp_init_zfp(); | ^~~~~~~~~~~~ H5FDsilo.c:1636:57: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1636 | fprintf(logf, "number of multi-block reads = %llu\n", file->stats.num_multiblock_reads); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1638:58: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1638 | fprintf(logf, "number of blocks majority md = %llu\n", file->stats.num_blocks_majority_md); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1639:59: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1639 | fprintf(logf, "number of blocks majority raw = %llu\n", file->stats.num_blocks_majority_raw); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1641:46: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1641 | fprintf(logf, "number of writes = %llu\n", file->stats.total_write_count); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1642:53: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1642 | fprintf(logf, "number of bytes written = %llu\n", file->stats.total_write_bytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1644:69: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1644 | fprintf(logf, "number of times a raw block was written = %llu\n", file->stats.total_block_raw_writes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1645:84: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1645 | number of times a raw block was written more than once = %llu\n", file->stats.total_block_raw_re_writes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1647:69: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1647 | fprintf(logf, "number of times an md block was written = %llu\n", file->stats.total_block_md_writes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1648:84: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1648 | number of times an md block was written more than once = %llu\n", file->stats.total_block_md_re_writes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1650:45: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1650 | fprintf(logf, "number of reads = %llu\n", file->stats.total_read_count); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1651:50: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1651 | fprintf(logf, "number of bytes read = %llu\n", file->stats.total_read_bytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1653:62: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1653 | fprintf(logf, "number of times a block was read = %llu\n", file->stats.total_block_reads); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1654:77: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1654 | logf, "number of times a block was read more than once = %llu\n", file->stats.total_block_re_reads); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1661:35: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1661 | fprintf(logf," %8llu: %4s (%f), #writes=%8llu, #reads=%8llu\n", | ~~~~^ | | | long long unsigned int | %8lu 1662 | hb->id, (hb->raw_frac>0.5?"raw":"meta"), hb->raw_frac, hb->num_block_writes+1, hb->num_block_reads+1); | ~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1661:60: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 6 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1661 | fprintf(logf," %8llu: %4s (%f), #writes=%8llu, #reads=%8llu\n", | ~~~~^ | | | long long unsigned int | %8lu 1662 | hb->id, (hb->raw_frac>0.5?"raw":"meta"), hb->raw_frac, hb->num_block_writes+1, hb->num_block_reads+1); | ~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1661:74: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 7 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1661 | fprintf(logf," %8llu: %4s (%f), #writes=%8llu, #reads=%8llu\n", | ~~~~^ | | | long long unsigned int | %8lu 1662 | hb->id, (hb->raw_frac>0.5?"raw":"meta"), hb->raw_frac, hb->num_block_writes+1, hb->num_block_reads+1); | ~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1671:47: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1671 | fprintf(logf, "number raw writes = %llu\n", file->stats.total_vfd_raw_write_count); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1672:54: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1672 | fprintf(logf, "number raw bytes written = %llu\n", file->stats.total_vfd_raw_write_bytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1673:46: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1673 | fprintf(logf, "number md writes = %llu\n", file->stats.total_vfd_md_write_count); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1674:53: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 3 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1674 | fprintf(logf, "number md bytes written = %llu\n", file->stats.total_vfd_md_write_bytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | | hsize_t {aka long unsigned int} | long long unsigned int | %lu H5FDsilo.c:1708:36: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 4 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1708 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ~~~~^ | | | long long unsigned int | %8lu 1709 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, 1710 | file->stats.vfd_raw_write_count_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1708:57: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 7 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1708 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ~~~~^ | | | long long unsigned int | %8lu ...... 1713 | file->stats.vfd_raw_write_bytes_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1708:26: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 10 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1708 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ...... 1716 | file->stats.vfd_md_write_count_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1709:36: note: format string is defined here 1709 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, | ~~~~^ | | | long long unsigned int | %8lu H5FDsilo.c:1708:26: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 13 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1708 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ...... 1719 | file->stats.vfd_md_write_bytes_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1709:57: note: format string is defined here 1709 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, | ~~~~^ | | | long long unsigned int | %8lu H5FDsilo.c:1755:36: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 4 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1755 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ~~~~^ | | | long long unsigned int | %8lu 1756 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, 1757 | file->stats.vfd_raw_read_count_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1755:57: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 7 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1755 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ~~~~^ | | | long long unsigned int | %8lu ...... 1760 | file->stats.vfd_raw_read_bytes_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1755:26: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 10 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1755 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ...... 1763 | file->stats.vfd_md_read_count_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1756:36: note: format string is defined here 1756 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, | ~~~~^ | | | long long unsigned int | %8lu H5FDsilo.c:1755:26: warning: format '%llu' expects argument of type 'long long unsigned int', but argument 13 has type 'hsize_t' {aka 'long unsigned int'} [-Wformat=[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat=]] 1755 | fprintf(logf,"%2d: %8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%) | " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ...... 1766 | file->stats.vfd_md_read_bytes_hist[i], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | hsize_t {aka long unsigned int} H5FDsilo.c:1756:57: note: format string is defined here 1756 | "%8llu (%3d%%, %3d%%) %8llu (%3d%%, %3d%%)\n", i, | ~~~~^ | | | long long unsigned int | %8lu H5FDsilo.c: In function 'H5FD_silo_get_eof': H5FDsilo.c:1981:2: warning: #warning TAKE ADVANTAGE OF TYPE INFO HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 1981 | #warning TAKE ADVANTAGE OF TYPE INFO HERE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_InitCallbacks': make[4]: *** [Makefile:509: H5FDsilo.lo] Error 1 make[4]: *** Waiting for unfinished jobs.... silo_hdf5.c:2799:2: warning: #warning GET RID OF CPLISTEDOBJECTS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 2799 | #warning GET RID OF CPLISTEDOBJECTS | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_set_compression': silo_hdf5.c:3347:2: warning: #warning WHAT ABOUT NULL RETURN FROM DBGETCOMPRESSION [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3347 | #warning WHAT ABOUT NULL RETURN FROM DBGETCOMPRESSION | ^~~~~~~ silo_hdf5.c:3378:2: warning: #warning FIX MISSING .compressionMinsize member [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3378 | #warning FIX MISSING .compressionMinsize member | ^~~~~~~ silo_hdf5.c:3396:2: warning: #warning QUERY FILE LEVEL COMPRESSION PARAMS HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 3396 | #warning QUERY FILE LEVEL COMPRESSION PARAMS HERE | ^~~~~~~ silo_hdf5.c: In function 'load_toc': silo_hdf5.c:4121:2: warning: #warning REVISIT THIS CODE BLOCK [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 4121 | #warning REVISIT THIS CODE BLOCK | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_resolvename': silo_hdf5.c:4736:2: warning: #warning HARD CODED SIZE HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 4736 | #warning HARD CODED SIZE HERE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_process_file_options': silo_hdf5.c:4960:2: warning: #warning FIX ME...THIS NEEDS TO BE CONDITION ON COMPAT MODE WORKS FOR 1.8.0 [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 4960 | #warning FIX ME...THIS NEEDS TO BE CONDITION ON COMPAT MODE WORKS FOR 1.8.0 | ^~~~~~~ silo_hdf5.c:4967:2: warning: #warning SET FRIENDLY NAMES TO 2 but only at file level [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 4967 | #warning SET FRIENDLY NAMES TO 2 but only at file level | ^~~~~~~ silo_hdf5.c:5004:2: warning: #warning REMOVED WINDOWS SPECIFIC CHECK [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5004 | #warning REMOVED WINDOWS SPECIFIC CHECK | ^~~~~~~ silo_hdf5.c:5094:2: warning: #warning DO WE STILL NEED THIS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5094 | #warning DO WE STILL NEED THIS | ^~~~~~~ silo_hdf5.c:5158:2: warning: #warning REMOVED WINDOWS SPECIFIC CHECK [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5158 | #warning REMOVED WINDOWS SPECIFIC CHECK | ^~~~~~~ silo_hdf5.c:5517:2: warning: #warning FIX THIS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5517 | #warning FIX THIS | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_Create': silo_hdf5.c:5971:2: warning: #warning BACKWARD COMPAT ISSUE FOR HDF5 [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 5971 | #warning BACKWARD COMPAT ISSUE FOR HDF5 | ^~~~~~~ silo_hdf5.c:6006:2: warning: #warning FIX FILE SCOPE GLOBAL INITIALIZATION [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6006 | #warning FIX FILE SCOPE GLOBAL INITIALIZATION | ^~~~~~~ silo_hdf5.c: In function 'copy_obj': silo_hdf5.c:6470:2: warning: #warning WHY THIS SIZE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6470 | #warning WHY THIS SIZE | ^~~~~~~ silo_hdf5.c: At top level: silo_hdf5.c:6639:2: warning: #warning REMOVE THIS MAYBE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 6639 | #warning REMOVE THIS MAYBE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_WriteObject': silo_hdf5.c:7376:2: warning: #warning COMPATABILITY ISSUE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 7376 | #warning COMPATABILITY ISSUE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_get_var_byte_length': silo_hdf5.c:7749:2: warning: #warning REMOVED db_perror CALLS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 7749 | #warning REMOVED db_perror CALLS | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_WriteCKZ': silo_hdf5.c:8395:2: warning: #warning WHAT IF EXISTING DATASET WAS COMPRESSED [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8395 | #warning WHAT IF EXISTING DATASET WAS COMPRESSED | ^~~~~~~ silo_hdf5.c:8437:2: warning: #warning COMPARE TO -1 OR TO NEGATIVE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8437 | #warning COMPARE TO -1 OR TO NEGATIVE | ^~~~~~~ silo_hdf5.c:8459:2: warning: #warning COMPARE TO -1 OR NEGATIVE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8459 | #warning COMPARE TO -1 OR NEGATIVE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_GetObject': silo_hdf5.c:8684:2: warning: #warning THIS IFDEFD CODE IS IN TRANSITION TO BETTER GENERIC OBJECTS [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8684 | #warning THIS IFDEFD CODE IS IN TRANSITION TO BETTER GENERIC OBJECTS | ^~~~~~~ silo_hdf5.c:8781:2: warning: #warning REVISIT THIS CLEANUP CODE. IS THERE A BETTER SYMBOLIC VALUE THAN -1 [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8781 | #warning REVISIT THIS CLEANUP CODE. IS THERE A BETTER SYMBOLIC VALUE THAN -1 | ^~~~~~~ silo_hdf5.c:8786:2: warning: #warning USE FREE() MACRO HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8786 | #warning USE FREE() MACRO HERE | ^~~~~~~ silo_hdf5.c:8798:2: warning: #warning USE FREE() MACRO HERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 8798 | #warning USE FREE() MACRO HERE | ^~~~~~~ silo_hdf5.c: In function 'db_hdf5_PutMultimat': silo_hdf5.c:14304:2: warning: #warning REPLACE WITH STRING UTILITIES [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 14304 | #warning REPLACE WITH STRING UTILITIES | ^~~~~~~ silo_hdf5.c:14342:2: warning: #warning IS THIS TAKEN CARE OF ELSEWHERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 14342 | #warning IS THIS TAKEN CARE OF ELSEWHERE | ^~~~~~~ silo_hdf5.c:14352:2: warning: #warning IS THIS TAKEN CARE OF ELSEWHERE [-Wcpp[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcpp]] 14352 | #warning IS THIS TAKEN CARE OF ELSEWHERE | ^~~~~~~ make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src/hdf5_drv' make[3]: *** [Makefile:687: all-recursive] Error 1 make[3]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src' make[2]: *** [Makefile:565: all] Error 2 make[2]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd/src' make[1]: *** [Makefile:545: all-recursive] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd' make: *** [Makefile:477: all] Error 2 * ERROR: sci-libs/silo-4.11-r1::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-libs/silo-4.11-r1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/silo-4.11-r1::gentoo'`. * The complete build log is located at '/var/log/emerge-log/build/sci-libs/silo-4.11-r1:20230613-173912.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/silo-4.11-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/silo-4.11-r1/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd' * S: '/var/tmp/portage/sci-libs/silo-4.11-r1/work/silo-4.11-bsd'