This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by cholmod configure 3.0.14, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/cholmod-3.0.14 --htmldir=/usr/share/doc/cholmod-3.0.14/html --with-sysroot=/ --libdir=/usr/lib64 --disable-static --with-blas=-lblas --with-lapack=-llapack --without-doc --with-modify --with-matrixops --with-partition --with-camd --with-supernodal --without-cuda ## --------- ## ## Platform. ## ## --------- ## hostname = localhost uname -m = x86_64 uname -r = 5.15.85-gentoo-dist uname -s = Linux uname -v = #1 SMP Thu Dec 22 12:11:58 -00 2022 /usr/bin/uname -p = AMD EPYC 7513 32-Core Processor /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/lib/portage/python3.11/ebuild-helpers/xattr PATH: /usr/lib/portage/python3.11/ebuild-helpers PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /opt/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2779: checking for a BSD-compatible install configure:2847: result: /usr/lib/portage/python3.11/ebuild-helpers/xattr/install -c configure:2858: checking whether build environment is sane configure:2913: result: yes configure:3064: checking for a thread-safe mkdir -p configure:3103: result: /bin/mkdir -p configure:3110: checking for gawk configure:3126: found /usr/bin/gawk configure:3137: result: gawk configure:3148: checking whether make sets $(MAKE) configure:3170: result: yes configure:3199: checking whether make supports nested variables configure:3216: result: yes configure:3355: checking whether make supports nested variables configure:3372: result: yes configure:3413: checking build system type configure:3427: result: x86_64-pc-linux-gnu configure:3447: checking host system type configure:3460: result: x86_64-pc-linux-gnu configure:3501: checking how to print strings configure:3528: result: printf configure:3553: checking whether make supports the include directive configure:3568: make -f confmf.GNU && cat confinc.out this is the am__doit target configure:3571: $? = 0 configure:3590: result: yes (GNU style) configure:3620: checking for x86_64-pc-linux-gnu-gcc configure:3636: found /usr/bin/x86_64-pc-linux-gnu-gcc configure:3647: result: x86_64-pc-linux-gnu-gcc configure:3916: checking for C compiler version configure:3925: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 13.1.0-r1 p1) 13.1.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3936: $? = 0 configure:3925: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/13/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-13.1.0-r1/work/gcc-13.1.0/configure --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/13 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/13/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13 --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/13/python --enable-languages=c,c++,fortran --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --disable-libunwind-exceptions --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo 13.1.0-r1 p1' --with-gcc-major-version-only --disable-esp --enable-libstdcxx-time --enable-lto --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-multilib --with-multilib-list=m32,m64 --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libssp --disable-libada --disable-cet --disable-systemtap --disable-valgrind-annotations --disable-vtable-verify --disable-libvtv --without-zstd --with-isl --disable-isl-version-check --enable-default-pie --disable-default-ssp --with-build-config=bootstrap-lto Thread model: posix Supported LTO compression algorithms: zlib gcc version 13.1.0 (Gentoo 13.1.0-r1 p1) configure:3936: $? = 0 configure:3925: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized command-line option '-V' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:3936: $? = 1 configure:3925: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:3936: $? = 1 configure:3956: checking whether the C compiler works configure:3978: x86_64-pc-linux-gnu-gcc -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:3982: $? = 0 configure:4030: result: yes configure:4033: checking for C compiler default output file name configure:4035: result: a.out configure:4041: checking for suffix of executables configure:4048: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:4052: $? = 0 configure:4074: result: configure:4096: checking whether we are cross compiling configure:4104: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:4108: $? = 0 configure:4115: ./conftest configure:4119: $? = 0 configure:4134: result: no configure:4139: checking for suffix of object files configure:4161: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:4165: $? = 0 configure:4186: result: o configure:4190: checking whether we are using the GNU C compiler configure:4209: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:4209: $? = 0 configure:4218: result: yes configure:4227: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:4247: x86_64-pc-linux-gnu-gcc -c -g conftest.c >&5 configure:4247: $? = 0 configure:4288: result: yes configure:4305: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:4368: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:4368: $? = 0 configure:4381: result: none needed configure:4406: checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together configure:4428: x86_64-pc-linux-gnu-gcc -c conftest.c -o conftest2.o configure:4431: $? = 0 configure:4428: x86_64-pc-linux-gnu-gcc -c conftest.c -o conftest2.o configure:4431: $? = 0 configure:4443: result: yes configure:4462: checking dependency style of x86_64-pc-linux-gnu-gcc configure:4573: result: none configure:4588: checking for a sed that does not truncate output configure:4652: result: /bin/sed configure:4670: checking for grep that handles long lines and -e configure:4728: result: /bin/grep configure:4733: checking for egrep configure:4795: result: /bin/grep -E configure:4800: checking for fgrep configure:4862: result: /bin/grep -F configure:4897: checking for ld used by x86_64-pc-linux-gnu-gcc configure:4964: result: /usr/x86_64-pc-linux-gnu/bin/ld configure:4971: checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld configure:4986: result: yes configure:4998: checking for BSD- or MS-compatible name lister (nm) configure:5052: result: /usr/bin/x86_64-pc-linux-gnu-nm -B configure:5182: checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface configure:5189: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:5192: /usr/bin/x86_64-pc-linux-gnu-nm -B "conftest.o" configure:5195: output 0000000000000000 B some_variable configure:5202: result: BSD nm configure:5205: checking whether ln -s works configure:5209: result: yes configure:5217: checking the maximum length of command line arguments configure:5353: result: 1572864 configure:5401: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:5441: result: func_convert_file_noop configure:5448: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:5468: result: func_convert_file_noop configure:5475: checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files configure:5482: result: -r configure:5516: checking for x86_64-pc-linux-gnu-objdump configure:5532: found /usr/bin/x86_64-pc-linux-gnu-objdump configure:5543: result: x86_64-pc-linux-gnu-objdump configure:5615: checking how to recognize dependent libraries configure:5815: result: pass_all configure:5860: checking for x86_64-pc-linux-gnu-dlltool configure:5890: result: no configure:5900: checking for dlltool configure:5930: result: no configure:5960: checking how to associate runtime and link libraries configure:5987: result: printf %s\n configure:6004: checking for x86_64-pc-linux-gnu-ar configure:6020: found /usr/bin/x86_64-pc-linux-gnu-ar configure:6031: result: x86_64-pc-linux-gnu-ar configure:6112: checking for archiver @FILE support configure:6129: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:6129: $? = 0 configure:6132: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 configure:6135: $? = 0 configure:6140: x86_64-pc-linux-gnu-ar cru libconftest.a @conftest.lst >&5 x86_64-pc-linux-gnu-ar: conftest.o: No such file or directory configure:6143: $? = 1 configure:6155: result: @ configure:6173: checking for x86_64-pc-linux-gnu-strip configure:6189: found /usr/bin/x86_64-pc-linux-gnu-strip configure:6200: result: x86_64-pc-linux-gnu-strip configure:6272: checking for x86_64-pc-linux-gnu-ranlib configure:6288: found /usr/bin/x86_64-pc-linux-gnu-ranlib configure:6299: result: x86_64-pc-linux-gnu-ranlib configure:6441: checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object configure:6594: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:6597: $? = 0 configure:6601: /usr/bin/x86_64-pc-linux-gnu-nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:6604: $? = 0 configure:6670: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c conftstm.o >&5 configure:6673: $? = 0 configure:6711: result: ok configure:6758: checking for sysroot configure:6788: result: / configure:6795: checking for a working dd configure:6833: result: /bin/dd configure:6837: checking how to truncate binary pipes configure:6852: result: /bin/dd bs=4096 count=1 configure:6988: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:6991: $? = 0 configure:7141: checking for x86_64-pc-linux-gnu-mt configure:7171: result: no configure:7181: checking for mt configure:7211: result: no configure:7231: checking if : is a manifest tool configure:7237: : '-?' configure:7245: result: no configure:7922: checking how to run the C preprocessor configure:7953: x86_64-pc-linux-gnu-gcc -E conftest.c configure:7953: $? = 0 configure:7967: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:7967: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | /* end confdefs.h. */ | #include configure:7992: result: x86_64-pc-linux-gnu-gcc -E configure:8012: x86_64-pc-linux-gnu-gcc -E conftest.c configure:8012: $? = 0 configure:8026: x86_64-pc-linux-gnu-gcc -E conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:8026: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | /* end confdefs.h. */ | #include configure:8055: checking for ANSI C header files configure:8075: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8075: $? = 0 configure:8148: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:8148: $? = 0 configure:8148: ./conftest configure:8148: $? = 0 configure:8159: result: yes configure:8172: checking for sys/types.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for sys/stat.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for stdlib.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for string.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for memory.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for strings.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for inttypes.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for stdint.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8172: checking for unistd.h configure:8172: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8172: $? = 0 configure:8172: result: yes configure:8186: checking for dlfcn.h configure:8186: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:8186: $? = 0 configure:8186: result: yes configure:8442: checking for objdir configure:8457: result: .libs configure:8721: checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions configure:8739: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command-line option '-fno-rtti' is valid for C++/D/ObjC++ but not for C configure:8743: $? = 0 configure:8756: result: no configure:9114: checking for x86_64-pc-linux-gnu-gcc option to produce PIC configure:9121: result: -fPIC -DPIC configure:9129: checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works configure:9147: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -fPIC -DPIC -DPIC conftest.c >&5 configure:9151: $? = 0 configure:9164: result: yes configure:9193: checking if x86_64-pc-linux-gnu-gcc static flag -static works configure:9221: result: yes configure:9236: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:9257: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -o out/conftest2.o conftest.c >&5 configure:9261: $? = 0 configure:9283: result: yes configure:9291: checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o configure:9338: result: yes configure:9371: checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries configure:10630: result: yes configure:10667: checking whether -lc should be explicitly linked in configure:10675: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:10678: $? = 0 configure:10693: x86_64-pc-linux-gnu-gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 configure:10696: $? = 0 configure:10710: result: no configure:10870: checking dynamic linker characteristics configure:11464: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:11464: $? = 0 configure:11701: result: GNU/Linux ld.so configure:11823: checking how to hardcode library paths into programs configure:11848: result: immediate configure:12396: checking whether stripping libraries is possible configure:12401: result: yes configure:12436: checking if libtool supports shared libraries configure:12438: result: yes configure:12441: checking whether to build shared libraries configure:12466: result: yes configure:12469: checking whether to build static libraries configure:12473: result: no configure:12525: checking for x86_64-pc-linux-gnu-gcc configure:12552: result: x86_64-pc-linux-gnu-gcc configure:12821: checking for C compiler version configure:12830: x86_64-pc-linux-gnu-gcc --version >&5 x86_64-pc-linux-gnu-gcc (Gentoo 13.1.0-r1 p1) 13.1.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12841: $? = 0 configure:12830: x86_64-pc-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=x86_64-pc-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/13/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-13.1.0-r1/work/gcc-13.1.0/configure --host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/13 --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/13/include --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13 --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13/man --infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/13/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/13/include/g++-v13 --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/13/python --enable-languages=c,c++,fortran --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --disable-libunwind-exceptions --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo 13.1.0-r1 p1' --with-gcc-major-version-only --disable-esp --enable-libstdcxx-time --enable-lto --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-multilib --with-multilib-list=m32,m64 --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libssp --disable-libada --disable-cet --disable-systemtap --disable-valgrind-annotations --disable-vtable-verify --disable-libvtv --without-zstd --with-isl --disable-isl-version-check --enable-default-pie --disable-default-ssp --with-build-config=bootstrap-lto Thread model: posix Supported LTO compression algorithms: zlib gcc version 13.1.0 (Gentoo 13.1.0-r1 p1) configure:12841: $? = 0 configure:12830: x86_64-pc-linux-gnu-gcc -V >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized command-line option '-V' x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:12841: $? = 1 configure:12830: x86_64-pc-linux-gnu-gcc -qversion >&5 x86_64-pc-linux-gnu-gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? x86_64-pc-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:12841: $? = 1 configure:12845: checking whether we are using the GNU C compiler configure:12873: result: yes configure:12882: checking whether x86_64-pc-linux-gnu-gcc accepts -g configure:12943: result: yes configure:12960: checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89 configure:13036: result: none needed configure:13061: checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together configure:13098: result: yes configure:13117: checking dependency style of x86_64-pc-linux-gnu-gcc configure:13228: result: none configure:13248: checking float.h usability configure:13248: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking float.h presence configure:13248: x86_64-pc-linux-gnu-gcc -E conftest.c configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking for float.h configure:13248: result: yes configure:13248: checking limits.h usability configure:13248: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking limits.h presence configure:13248: x86_64-pc-linux-gnu-gcc -E conftest.c configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking for limits.h configure:13248: result: yes configure:13248: checking stddef.h usability configure:13248: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking stddef.h presence configure:13248: x86_64-pc-linux-gnu-gcc -E conftest.c configure:13248: $? = 0 configure:13248: result: yes configure:13248: checking for stddef.h configure:13248: result: yes configure:13248: checking for stdlib.h configure:13248: result: yes configure:13248: checking for string.h configure:13248: result: yes configure:13260: checking for uid_t in sys/types.h configure:13279: result: yes configure:13290: checking for int32_t configure:13290: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13290: $? = 0 configure:13290: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:66:67: warning: integer overflow in expression of type 'int' results in '-2147483648' [-Woverflow] 66 | < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))]; | ^ conftest.c:65:12: error: storage size of 'test_array' isn't constant 65 | static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1) | ^~~~~~~~~~ configure:13290: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | enum { N = 32 / 2 - 1 }; | int | main () | { | static int test_array [1 - 2 * !((int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 1) | < (int32_t) (((((int32_t) 1 << N) << N) - 1) * 2 + 2))]; | test_array [0] = 0; | return test_array [0]; | | ; | return 0; | } configure:13290: result: yes configure:13301: checking for mode_t configure:13301: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13301: $? = 0 configure:13301: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token 64 | if (sizeof ((mode_t))) | ^ configure:13301: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((mode_t))) | return 0; | ; | return 0; | } configure:13301: result: yes configure:13312: checking for off_t configure:13312: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13312: $? = 0 configure:13312: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token 64 | if (sizeof ((off_t))) | ^ configure:13312: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:13312: result: yes configure:13323: checking for pid_t configure:13323: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13323: $? = 0 configure:13323: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:64:20: error: expected expression before ')' token 64 | if (sizeof ((pid_t))) | ^ configure:13323: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:13323: result: yes configure:13334: checking for size_t configure:13334: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13334: $? = 0 configure:13334: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:64:21: error: expected expression before ')' token 64 | if (sizeof ((size_t))) | ^ configure:13334: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:13334: result: yes configure:13345: checking for ssize_t configure:13345: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13345: $? = 0 configure:13345: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 conftest.c: In function 'main': conftest.c:64:22: error: expected expression before ')' token 64 | if (sizeof ((ssize_t))) | ^ configure:13345: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:13345: result: yes configure:13356: checking whether struct tm is in sys/time.h or time.h configure:13376: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13376: $? = 0 configure:13383: result: time.h configure:13391: checking for struct tm.tm_zone configure:13391: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13391: $? = 0 configure:13391: result: yes configure:13462: checking for working alloca.h configure:13479: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:13479: $? = 0 configure:13487: result: yes configure:13495: checking for alloca configure:13532: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:13532: $? = 0 configure:13540: result: yes configure:13646: checking for error_at_line configure:13662: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:13662: $? = 0 configure:13670: result: yes configure:13683: checking for stdlib.h configure:13683: result: yes configure:13693: checking for GNU libc compatible malloc configure:13717: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:13717: $? = 0 configure:13717: ./conftest configure:13717: $? = 0 configure:13727: result: yes configure:13748: checking whether time.h and sys/time.h may both be included configure:13768: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13768: $? = 0 configure:13775: result: yes configure:13789: checking for sys/time.h configure:13789: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:13789: $? = 0 configure:13789: result: yes configure:13789: checking for unistd.h configure:13789: result: yes configure:13810: checking for alarm configure:13810: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:13810: $? = 0 configure:13810: result: yes configure:13823: checking for working mktime configure:14025: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14025: $? = 0 configure:14025: ./conftest configure:14025: $? = 0 configure:14035: result: yes configure:14048: checking for stdlib.h configure:14048: result: yes configure:14058: checking for GNU libc compatible realloc configure:14082: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14082: $? = 0 configure:14082: ./conftest configure:14082: $? = 0 configure:14092: result: yes configure:14113: checking for working strtod configure:14154: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14154: $? = 0 configure:14154: ./conftest configure:14154: $? = 0 configure:14164: result: yes configure:14229: checking for atexit configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for localtime_r configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for mblen configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for putenv configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for realpath configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for rpmatch configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for select configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for setenv configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for stime configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-libs/cholmod-3.0.14/temp/ccwKO1A5.o: in function `main': conftest.c:(.text.startup+0x7): undefined reference to `stime' collect2: error: ld returned 1 exit status configure:14229: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRUCT_TM_TM_ZONE 1 | #define HAVE_TM_ZONE 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STDLIB_H 1 | #define HAVE_MALLOC 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ALARM 1 | #define HAVE_STDLIB_H 1 | #define HAVE_REALLOC 1 | #define HAVE_ATEXIT 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_MBLEN 1 | #define HAVE_PUTENV 1 | #define HAVE_REALPATH 1 | #define HAVE_RPMATCH 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | /* end confdefs.h. */ | /* Define stime to an innocuous variant, in case declares stime. | For example, HP-UX 11i declares gettimeofday. */ | #define stime innocuous_stime | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char stime (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef stime | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char stime (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_stime || defined __stub___stime | choke me | #endif | | int | main () | { | return stime (); | ; | return 0; | } configure:14229: result: no configure:14229: checking for strtol configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for strtoul configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for strtoull configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14229: checking for tzset configure:14229: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c >&5 configure:14229: $? = 0 configure:14229: result: yes configure:14240: checking for sqrt in -lm configure:14265: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c -lm >&5 conftest.c:59:6: warning: conflicting types for built-in function 'sqrt'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 59 | char sqrt (); | ^~~~ conftest.c:1:1: note: 'sqrt' is declared in header '' 1 | /* confdefs.h */ configure:14265: $? = 0 configure:14274: result: yes configure:14286: checking for clock_gettime in -lrt configure:14311: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 conftest.c -lrt -lm >&5 configure:14311: $? = 0 configure:14320: result: yes configure:14345: checking for x86_64-pc-linux-gnu-pkg-config configure:14363: found /usr/bin/x86_64-pc-linux-gnu-pkg-config configure:14375: result: /usr/bin/x86_64-pc-linux-gnu-pkg-config configure:14443: checking pkg-config is at least version 0.9.0 configure:14446: result: yes configure:14479: checking for suitesparseconfig configure:14486: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:14489: $? = 0 configure:14503: $PKG_CONFIG --exists --print-errors "suitesparseconfig" configure:14506: $? = 0 configure:14564: result: yes configure:14593: checking SuiteSparse_config.h usability configure:14593: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:14593: $? = 0 configure:14593: result: yes configure:14593: checking SuiteSparse_config.h presence configure:14593: x86_64-pc-linux-gnu-gcc -E conftest.c configure:14593: $? = 0 configure:14593: result: yes configure:14593: checking for SuiteSparse_config.h configure:14593: result: yes configure:14596: checking for SuiteSparse_malloc in -lsuitesparseconfig configure:14621: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lsuitesparseconfig conftest.c -lsuitesparseconfig -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lsuitesparseconfig -lrt -lm >&5 configure:14621: $? = 0 configure:14631: result: yes configure:14667: checking whether to build user guide configure:14934: result: no configure:15312: checking for amd configure:15319: $PKG_CONFIG --exists --print-errors "amd" configure:15322: $? = 0 configure:15336: $PKG_CONFIG --exists --print-errors "amd" configure:15339: $? = 0 configure:15397: result: yes configure:15426: checking amd.h usability configure:15426: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:15426: $? = 0 configure:15426: result: yes configure:15426: checking amd.h presence configure:15426: x86_64-pc-linux-gnu-gcc -E conftest.c configure:15426: $? = 0 configure:15426: result: yes configure:15426: checking for amd.h configure:15426: result: yes configure:15429: checking for amd_info in -lamd configure:15454: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lamd -lsuitesparseconfig conftest.c -lamd -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lamd -lsuitesparseconfig -lrt -lm >&5 configure:15454: $? = 0 configure:15464: result: yes configure:15522: checking for colamd configure:15529: $PKG_CONFIG --exists --print-errors "colamd" configure:15532: $? = 0 configure:15546: $PKG_CONFIG --exists --print-errors "colamd" configure:15549: $? = 0 configure:15607: result: yes configure:15636: checking colamd.h usability configure:15636: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:15636: $? = 0 configure:15636: result: yes configure:15636: checking colamd.h presence configure:15636: x86_64-pc-linux-gnu-gcc -E conftest.c configure:15636: $? = 0 configure:15636: result: yes configure:15636: checking for colamd.h configure:15636: result: yes configure:15639: checking for colamd_recommended in -lcolamd configure:15664: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lcolamd -lsuitesparseconfig conftest.c -lcolamd -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lcolamd -lsuitesparseconfig -lrt -lm >&5 configure:15664: $? = 0 configure:15674: result: yes configure:15807: checking for ccolamd configure:15814: $PKG_CONFIG --exists --print-errors "ccolamd" configure:15817: $? = 0 configure:15831: $PKG_CONFIG --exists --print-errors "ccolamd" configure:15834: $? = 0 configure:15892: result: yes configure:15921: checking ccolamd.h usability configure:15921: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:15921: $? = 0 configure:15921: result: yes configure:15921: checking ccolamd.h presence configure:15921: x86_64-pc-linux-gnu-gcc -E conftest.c configure:15921: $? = 0 configure:15921: result: yes configure:15921: checking for ccolamd.h configure:15921: result: yes configure:15924: checking for ccolamd_report in -lccolamd configure:15949: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lccolamd -lsuitesparseconfig conftest.c -lccolamd -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lccolamd -lsuitesparseconfig -lrt -lm >&5 configure:15949: $? = 0 configure:15959: result: yes configure:16018: checking for camd configure:16025: $PKG_CONFIG --exists --print-errors "camd" configure:16028: $? = 0 configure:16042: $PKG_CONFIG --exists --print-errors "camd" configure:16045: $? = 0 configure:16103: result: yes configure:16132: checking camd.h usability configure:16132: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 conftest.c >&5 configure:16132: $? = 0 configure:16132: result: yes configure:16132: checking camd.h presence configure:16132: x86_64-pc-linux-gnu-gcc -E conftest.c configure:16132: $? = 0 configure:16132: result: yes configure:16132: checking for camd.h configure:16132: result: yes configure:16135: checking for camd_info in -lcamd configure:16160: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lcamd -lsuitesparseconfig conftest.c -lcamd -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lcamd -lsuitesparseconfig -lrt -lm >&5 configure:16160: $? = 0 configure:16170: result: yes configure:16231: checking for metis configure:16238: $PKG_CONFIG --exists --print-errors "metis" configure:16241: $? = 0 configure:16255: $PKG_CONFIG --exists --print-errors "metis" configure:16258: $? = 0 configure:16316: result: yes configure:16345: checking metis.h usability configure:16345: x86_64-pc-linux-gnu-gcc -c -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -I/usr/include/metis conftest.c >&5 configure:16345: $? = 0 configure:16345: result: yes configure:16345: checking metis.h presence configure:16345: x86_64-pc-linux-gnu-gcc -E -I/usr/include/metis conftest.c configure:16345: $? = 0 configure:16345: result: yes configure:16345: checking for metis.h configure:16345: result: yes configure:16348: checking for METIS_NodeND in -lmetis configure:16373: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -I/usr/include/metis -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lmetis conftest.c -lmetis -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lmetis -lrt -lm >&5 /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_malloc_cleanup' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_realloc' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_free' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_sigtrap' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_mcorePush' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_randinit' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_idxsmalloc' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_jbufs' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_mcorePop' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_malloc_init' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_mcoreCreate' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_errexit' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_malloc' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_cur_jbufs' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_siguntrap' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_randint32' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_rmpath' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_CPUSeconds' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_mcoreMalloc' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_mcoreDestroy' /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_log2' collect2: error: ld returned 1 exit status configure:16373: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "cholmod" | #define PACKAGE_TARNAME "cholmod" | #define PACKAGE_VERSION "3.0.14" | #define PACKAGE_STRING "cholmod 3.0.14" | #define PACKAGE_BUGREPORT "davis@tamu.edu" | #define PACKAGE_URL "" | #define PACKAGE "cholmod" | #define VERSION "3.0.14" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_FLOAT_H 1 | #define HAVE_LIMITS_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRUCT_TM_TM_ZONE 1 | #define HAVE_TM_ZONE 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_STDLIB_H 1 | #define HAVE_MALLOC 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_ALARM 1 | #define HAVE_STDLIB_H 1 | #define HAVE_REALLOC 1 | #define HAVE_ATEXIT 1 | #define HAVE_LOCALTIME_R 1 | #define HAVE_MBLEN 1 | #define HAVE_PUTENV 1 | #define HAVE_REALPATH 1 | #define HAVE_RPMATCH 1 | #define HAVE_SELECT 1 | #define HAVE_SETENV 1 | #define HAVE_STRTOL 1 | #define HAVE_STRTOUL 1 | #define HAVE_STRTOULL 1 | #define HAVE_TZSET 1 | #define HAVE_LIBM 1 | #define HAVE_LIBRT 1 | #define HAVE_SUITESPARSECONFIG 1 | #define HAVE_AMD 1 | #define HAVE_COLAMD 1 | #define HAVE_CCOLAMD 1 | #define HAVE_CAMD 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char METIS_NodeND (); | int | main () | { | return METIS_NodeND (); | ; | return 0; | } configure:16383: result: no configure:16411: error: Could not find metis library ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_int32_t=yes ac_cv_c_undeclared_builtin_options='none needed' ac_cv_env_AMD_CFLAGS_set= ac_cv_env_AMD_CFLAGS_value= ac_cv_env_AMD_LIBS_set= ac_cv_env_AMD_LIBS_value= ac_cv_env_BLAS_CFLAGS_set= ac_cv_env_BLAS_CFLAGS_value= ac_cv_env_BLAS_LIBS_set= ac_cv_env_BLAS_LIBS_value= ac_cv_env_CAMD_CFLAGS_set= ac_cv_env_CAMD_CFLAGS_value= ac_cv_env_CAMD_LIBS_set= ac_cv_env_CAMD_LIBS_value= ac_cv_env_CCOLAMD_CFLAGS_set= ac_cv_env_CCOLAMD_CFLAGS_value= ac_cv_env_CCOLAMD_LIBS_set= ac_cv_env_CCOLAMD_LIBS_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' ac_cv_env_COLAMD_CFLAGS_set= ac_cv_env_COLAMD_CFLAGS_value= ac_cv_env_COLAMD_LIBS_set= ac_cv_env_COLAMD_LIBS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CUBLAS_CFLAGS_set= ac_cv_env_CUBLAS_CFLAGS_value= ac_cv_env_CUBLAS_LIBS_set= ac_cv_env_CUBLAS_LIBS_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set=set ac_cv_env_FFLAGS_value='-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' ac_cv_env_LAPACK_CFLAGS_set= ac_cv_env_LAPACK_CFLAGS_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_METIS_CFLAGS_set= ac_cv_env_METIS_CFLAGS_value= ac_cv_env_METIS_LIBS_set= ac_cv_env_METIS_LIBS_value= ac_cv_env_PKG_CONFIG_LIBDIR_set= ac_cv_env_PKG_CONFIG_LIBDIR_value= ac_cv_env_PKG_CONFIG_PATH_set= ac_cv_env_PKG_CONFIG_PATH_value= ac_cv_env_PKG_CONFIG_set= ac_cv_env_PKG_CONFIG_value= ac_cv_env_SUITESPARSECONFIG_CFLAGS_set= ac_cv_env_SUITESPARSECONFIG_CFLAGS_value= ac_cv_env_SUITESPARSECONFIG_LIBS_set= ac_cv_env_SUITESPARSECONFIG_LIBS_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-pc-linux-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=x86_64-pc-linux-gnu ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_alarm=yes ac_cv_func_alloca_works=yes ac_cv_func_atexit=yes ac_cv_func_localtime_r=yes ac_cv_func_malloc_0_nonnull=yes ac_cv_func_mblen=yes ac_cv_func_putenv=yes ac_cv_func_realloc_0_nonnull=yes ac_cv_func_realpath=yes ac_cv_func_rpmatch=yes ac_cv_func_select=yes ac_cv_func_setenv=yes ac_cv_func_stime=no ac_cv_func_strtod=yes ac_cv_func_strtol=yes ac_cv_func_strtoul=yes ac_cv_func_strtoull=yes ac_cv_func_tzset=yes ac_cv_func_working_mktime=yes ac_cv_header_SuiteSparse_config_h=yes ac_cv_header_amd_h=yes ac_cv_header_camd_h=yes ac_cv_header_ccolamd_h=yes ac_cv_header_colamd_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_float_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_limits_h=yes ac_cv_header_memory_h=yes ac_cv_header_metis_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_amd_amd_info=yes ac_cv_lib_camd_camd_info=yes ac_cv_lib_ccolamd_ccolamd_report=yes ac_cv_lib_colamd_colamd_recommended=yes ac_cv_lib_error_at_line=yes ac_cv_lib_m_sqrt=yes ac_cv_lib_metis_METIS_NodeND=no ac_cv_lib_rt_clock_gettime=yes ac_cv_lib_suitesparseconfig_SuiteSparse_malloc=yes ac_cv_member_struct_tm_tm_zone=yes ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_FGREP='/bin/grep -F' ac_cv_path_GREP=/bin/grep ac_cv_path_PKG_CONFIG=/usr/bin/x86_64-pc-linux-gnu-pkg-config ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/lib/portage/python3.11/ebuild-helpers/xattr/install -c' ac_cv_path_lt_DD=/bin/dd ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=x86_64-pc-linux-gnu-ar ac_cv_prog_AWK=gawk ac_cv_prog_CC=x86_64-pc-linux-gnu-gcc ac_cv_prog_CPP='x86_64-pc-linux-gnu-gcc -E' ac_cv_prog_OBJDUMP=x86_64-pc-linux-gnu-objdump ac_cv_prog_RANLIB=x86_64-pc-linux-gnu-ranlib ac_cv_prog_STRIP=x86_64-pc-linux-gnu-strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_struct_tm=time.h ac_cv_type_mode_t=yes ac_cv_type_off_t=yes ac_cv_type_pid_t=yes ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uid_t=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=none am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes ax_cv_has_amd=yes ax_cv_has_camd=yes ax_cv_has_ccolamd=yes ax_cv_has_colamd=yes ax_cv_has_metis=no ax_cv_has_suitesparseconfig=yes ax_cv_symbol=METIS_NodeND gl_cv_compiler_check_decl_option=-Werror=implicit-function-declaration lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/x86_64-pc-linux-gnu/bin/ld lt_cv_path_NM='/usr/bin/x86_64-pc-linux-gnu-nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=yes lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/bin/dd bs=4096 count=1' pkg_cv_AMD_CFLAGS= pkg_cv_AMD_LIBS='-lamd -lsuitesparseconfig ' pkg_cv_CAMD_CFLAGS= pkg_cv_CAMD_LIBS='-lcamd -lsuitesparseconfig ' pkg_cv_CCOLAMD_CFLAGS= pkg_cv_CCOLAMD_LIBS='-lccolamd -lsuitesparseconfig ' pkg_cv_COLAMD_CFLAGS= pkg_cv_COLAMD_LIBS='-lcolamd -lsuitesparseconfig ' pkg_cv_METIS_CFLAGS='-I/usr/include/metis ' pkg_cv_METIS_LIBS='-lmetis ' pkg_cv_SUITESPARSECONFIG_CFLAGS= pkg_cv_SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/missing aclocal-1.16' ALLOCA='' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMD_CFLAGS='' AMD_LIBS='-lamd -lsuitesparseconfig ' AMD_PC='amd' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='x86_64-pc-linux-gnu-ar' AUTOCONF='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/missing autoconf' AUTOHEADER='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/missing autoheader' AUTOMAKE='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/missing automake-1.16' AWK='gawk' BIBTEX='' BLAS_CFLAGS='' BLAS_LIBS='' BLAS_PC='' BUILD_DOCS_FALSE='' BUILD_DOCS_TRUE='#' CAMD_CFLAGS='' CAMD_LIBS='-lcamd -lsuitesparseconfig ' CAMD_PC='camd' CC='x86_64-pc-linux-gnu-gcc' CCDEPMODE='depmode=none' CCOLAMD_CFLAGS='' CCOLAMD_LIBS='-lccolamd -lsuitesparseconfig ' CCOLAMD_PC='ccolamd' CFLAGS='-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' COLAMD_CFLAGS='' COLAMD_LIBS='-lcolamd -lsuitesparseconfig ' COLAMD_PC='colamd' CPP='x86_64-pc-linux-gnu-gcc -E' CPPFLAGS='' CUBLAS_CFLAGS='' CUBLAS_LIBS='' CUBLAS_PC='' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' DLLTOOL='false' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' EXPAND='' F77='' FFLAGS='-O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0' FGREP='/bin/grep -F' FLIBS='' GREP='/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LAPACK_CFLAGS='' LAPACK_LIBS='' LAPACK_PC='' LD='/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64' LDFLAGS='-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' LIBOBJS='' LIBS='-lrt -lm ' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_AGE='0' LT_CURRENT='3' LT_REVISION='0' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/missing makeinfo' MANIFEST_TOOL=':' METIS_CFLAGS='-I/usr/include/metis ' METIS_LIBS='-lmetis ' METIS_PC='metis' MKDIR_P='/bin/mkdir -p' NM='/usr/bin/x86_64-pc-linux-gnu-nm -B' NMEDIT='' NVCC='' OBJDUMP='x86_64-pc-linux-gnu-objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='cholmod' PACKAGE_BUGREPORT='davis@tamu.edu' PACKAGE_NAME='cholmod' PACKAGE_STRING='cholmod 3.0.14' PACKAGE_TARNAME='cholmod' PACKAGE_URL='' PACKAGE_VERSION='3.0.14' PATH_SEPARATOR=':' PC_LIBS='' PDFLATEX='' PKG_CONFIG='/usr/bin/x86_64-pc-linux-gnu-pkg-config' PKG_CONFIG_LIBDIR='' PKG_CONFIG_PATH='' POW_LIB='' RANLIB='x86_64-pc-linux-gnu-ranlib' SED='/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='x86_64-pc-linux-gnu-strip' SUITESPARSECONFIG_CFLAGS='' SUITESPARSECONFIG_LIBS='-lsuitesparseconfig ' SUITESPARSECONFIG_PC='suitesparseconfig' VERSION='3.0.14' WITH_CHECK_FALSE='#' WITH_CHECK_TRUE='' WITH_CHOLESKY_FALSE='#' WITH_CHOLESKY_TRUE='' WITH_CUDA_FALSE='' WITH_CUDA_TRUE='#' WITH_MATRIXOPS_FALSE='#' WITH_MATRIXOPS_TRUE='' WITH_MODIFY_FALSE='#' WITH_MODIFY_TRUE='' WITH_PARTITION_FALSE='' WITH_PARTITION_TRUE='' WITH_SUPERNODAL_FALSE='' WITH_SUPERNODAL_TRUE='' ac_ct_AR='' ac_ct_CC='' ac_ct_DUMPBIN='' ac_ct_F77='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-pc-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='/usr/share' datarootdir='${prefix}/share' docdir='/usr/share/doc/cholmod-3.0.14' dvidir='${docdir}' exec_prefix='NONE' host='x86_64-pc-linux-gnu' host_alias='x86_64-pc-linux-gnu' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='/usr/share/doc/cholmod-3.0.14/html' includedir='${prefix}/include' infodir='/usr/share/info' install_sh='${SHELL} /var/tmp/portage/sci-libs/cholmod-3.0.14/work/cholmod-3.0.14/config/install-sh' libdir='/usr/lib64' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='/var/lib' mandir='/usr/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "cholmod" #define PACKAGE_TARNAME "cholmod" #define PACKAGE_VERSION "3.0.14" #define PACKAGE_STRING "cholmod 3.0.14" #define PACKAGE_BUGREPORT "davis@tamu.edu" #define PACKAGE_URL "" #define PACKAGE "cholmod" #define VERSION "3.0.14" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_FLOAT_H 1 #define HAVE_LIMITS_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRUCT_TM_TM_ZONE 1 #define HAVE_TM_ZONE 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_STDLIB_H 1 #define HAVE_MALLOC 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define HAVE_ALARM 1 #define HAVE_STDLIB_H 1 #define HAVE_REALLOC 1 #define HAVE_ATEXIT 1 #define HAVE_LOCALTIME_R 1 #define HAVE_MBLEN 1 #define HAVE_PUTENV 1 #define HAVE_REALPATH 1 #define HAVE_RPMATCH 1 #define HAVE_SELECT 1 #define HAVE_SETENV 1 #define HAVE_STRTOL 1 #define HAVE_STRTOUL 1 #define HAVE_STRTOULL 1 #define HAVE_TZSET 1 #define HAVE_LIBM 1 #define HAVE_LIBRT 1 #define HAVE_SUITESPARSECONFIG 1 #define HAVE_AMD 1 #define HAVE_COLAMD 1 #define HAVE_CCOLAMD 1 #define HAVE_CAMD 1 configure: exit 1