CMakeError.log

CMakeError.log (text/plain), 16.74 KB, created by Toralf Förster on 2023-02-16 20:25:48 UTC

Determining if the function fftwf_plan_with_nthreads exists in the /usr/lib64/libfftw3f.so failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-l8ME33

Run Build Command(s):/usr/bin/ninja cmTC_da5eb && [1/2] Building C object CMakeFiles/cmTC_da5eb.dir/CheckFunctionExists.c.o
[2/2] Linking C executable cmTC_da5eb
FAILED: cmTC_da5eb 
: && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -DCHECK_FUNCTION_EXISTS=fftwf_plan_with_nthreads -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0   -rdynamic CMakeFiles/cmTC_da5eb.dir/CheckFunctionExists.c.o -o cmTC_da5eb  /usr/lib64/libfftw3f.so && :
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_da5eb.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `fftwf_plan_with_nthreads'
collect2: error: ld returned 1 exit status
ninja: build stopped: subcommand failed.



Determining if the include file io.h exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-tdKKTb

Run Build Command(s):/usr/bin/ninja cmTC_441b4 && [1/2] Building C object CMakeFiles/cmTC_441b4.dir/CheckIncludeFile.c.o
FAILED: CMakeFiles/cmTC_441b4.dir/CheckIncludeFile.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc    -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_441b4.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-tdKKTb/CheckIncludeFile.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-tdKKTb/CheckIncludeFile.c:1:10: fatal error: io.h: No such file or directory
    1 | #include <io.h>
      |          ^~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.



Determining if the include file direct.h exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-xqICOQ

Run Build Command(s):/usr/bin/ninja cmTC_1e290 && [1/2] Building C object CMakeFiles/cmTC_1e290.dir/CheckIncludeFile.c.o
FAILED: CMakeFiles/cmTC_1e290.dir/CheckIncludeFile.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc    -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_1e290.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-xqICOQ/CheckIncludeFile.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-xqICOQ/CheckIncludeFile.c:1:10: fatal error: direct.h: No such file or directory
    1 | #include <direct.h>
      |          ^~~~~~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.



Determining if the include file process.h exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-cA4Llh

Run Build Command(s):/usr/bin/ninja cmTC_71e8c && [1/2] Building C object CMakeFiles/cmTC_71e8c.dir/CheckIncludeFile.c.o
FAILED: CMakeFiles/cmTC_71e8c.dir/CheckIncludeFile.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc    -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_71e8c.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-cA4Llh/CheckIncludeFile.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-cA4Llh/CheckIncludeFile.c:1:10: fatal error: process.h: No such file or directory
    1 | #include <process.h>
      |          ^~~~~~~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.



Determining if the function stricmp exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-gMrQKN

Run Build Command(s):/usr/bin/ninja cmTC_9af53 && [1/2] Building C object CMakeFiles/cmTC_9af53.dir/CheckFunctionExists.c.o
[2/2] Linking C executable cmTC_9af53
FAILED: cmTC_9af53 
: && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp -DCHECK_FUNCTION_EXISTS=stricmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0   -rdynamic CMakeFiles/cmTC_9af53.dir/CheckFunctionExists.c.o -o cmTC_9af53   && :
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_9af53.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `stricmp'
collect2: error: ld returned 1 exit status
ninja: build stopped: subcommand failed.



Determining if the function strnicmp exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-v2Gybp

Run Build Command(s):/usr/bin/ninja cmTC_8f81d && [1/2] Building C object CMakeFiles/cmTC_8f81d.dir/CheckFunctionExists.c.o
[2/2] Linking C executable cmTC_8f81d
FAILED: cmTC_8f81d 
: && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp -DCHECK_FUNCTION_EXISTS=strnicmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0   -rdynamic CMakeFiles/cmTC_8f81d.dir/CheckFunctionExists.c.o -o cmTC_8f81d   && :
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_8f81d.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `strnicmp'
collect2: error: ld returned 1 exit status
ninja: build stopped: subcommand failed.



Performing C SOURCE FILE Test HAVE_SC_NPROC_ONLN failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-IO9VG4

Run Build Command(s):/usr/bin/ninja cmTC_cbd0a && [1/2] Building C object CMakeFiles/cmTC_cbd0a.dir/src.c.o
FAILED: CMakeFiles/cmTC_cbd0a.dir/src.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -DHAVE_SC_NPROC_ONLN -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_cbd0a.dir/src.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-IO9VG4/src.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-IO9VG4/src.c: In function ‘main’:
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-IO9VG4/src.c:4:35: error: ‘_SC_NPROC_ONLN’ undeclared (first use in this function); did you mean ‘HAVE_SC_NPROC_ONLN’?
    4 |                           sysconf(_SC_NPROC_ONLN);
      |                                   ^~~~~~~~~~~~~~
      |                                   HAVE_SC_NPROC_ONLN
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-IO9VG4/src.c:4:35: note: each undeclared identifier is reported only once for each function it appears in
ninja: build stopped: subcommand failed.


Source file was:

			#include <unistd.h>
			int main() {
			  sysconf(_SC_NPROC_ONLN);
			}
			

Performing C SOURCE FILE Test HAVE_SYSCTL_HW_NCPU failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OHrWhv

Run Build Command(s):/usr/bin/ninja cmTC_e943b && [1/2] Building C object CMakeFiles/cmTC_e943b.dir/src.c.o
FAILED: CMakeFiles/cmTC_e943b.dir/src.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -DHAVE_SYSCTL_HW_NCPU -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_e943b.dir/src.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OHrWhv/src.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OHrWhv/src.c:3:26: fatal error: sys/sysctl.h: No such file or directory
    3 |                 #include <sys/sysctl.h>
      |                          ^~~~~~~~~~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.


Source file was:

		#include <stddef.h>
		#include <sys/sysctl.h>
		int main () {
		  int count;
		  size_t size = sizeof(count);
		  int mib[] = { CTL_HW, HW_NCPU };
		  sysctl(mib, 2, &count, &size, NULL, 0);
		}
		

Determining size of bool failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-8H8tCD

Run Build Command(s):/usr/bin/ninja cmTC_0461a && [1/2] Building C object CMakeFiles/cmTC_0461a.dir/SIZEOF_BOOL.c.o
FAILED: CMakeFiles/cmTC_0461a.dir/SIZEOF_BOOL.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_0461a.dir/SIZEOF_BOOL.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-8H8tCD/SIZEOF_BOOL.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-8H8tCD/SIZEOF_BOOL.c:27:22: error: ‘bool’ undeclared here (not in a function)
   27 | #define SIZE (sizeof(bool))
      |                      ^~~~
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-8H8tCD/SIZEOF_BOOL.c:29:12: note: in expansion of macro ‘SIZE’
   29 |   ('0' + ((SIZE / 10000)%10)),
      |            ^~~~
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-8H8tCD/SIZEOF_BOOL.c:4:1: note: ‘bool’ is defined in header ‘<stdbool.h>’; did you forget to ‘#include <stdbool.h>’?
    3 | #include <stddef.h>
  +++ |+#include <stdbool.h>
    4 | 
ninja: build stopped: subcommand failed.


SIZEOF_BOOL.c:
#include <sys/types.h>
#include <stdint.h>
#include <stddef.h>


#undef KEY
#if defined(__i386)
# define KEY '_','_','i','3','8','6'
#elif defined(__x86_64)
# define KEY '_','_','x','8','6','_','6','4'
#elif defined(__PPC64__)
# define KEY '_','_','P','P','C','6','4','_','_'
#elif defined(__ppc64__)
# define KEY '_','_','p','p','c','6','4','_','_'
#elif defined(__PPC__)
# define KEY '_','_','P','P','C','_','_'
#elif defined(__ppc__)
# define KEY '_','_','p','p','c','_','_'
#elif defined(__aarch64__)
# define KEY '_','_','a','a','r','c','h','6','4','_','_'
#elif defined(__ARM_ARCH_7A__)
# define KEY '_','_','A','R','M','_','A','R','C','H','_','7','A','_','_'
#elif defined(__ARM_ARCH_7S__)
# define KEY '_','_','A','R','M','_','A','R','C','H','_','7','S','_','_'
#endif

#define SIZE (sizeof(bool))
static char info_size[] =  {'I', 'N', 'F', 'O', ':', 's','i','z','e','[',
  ('0' + ((SIZE / 10000)%10)),
  ('0' + ((SIZE / 1000)%10)),
  ('0' + ((SIZE / 100)%10)),
  ('0' + ((SIZE / 10)%10)),
  ('0' +  (SIZE    % 10)),
  ']',
#ifdef KEY
  ' ','k','e','y','[', KEY, ']',
#endif
  '\0'};

#ifdef __CLASSIC_C__
int main(argc, argv) int argc; char *argv[];
#else
int main(int argc, char *argv[])
#endif
{
  int require = 0;
  require += info_size[argc];
  (void)argv;
  return require;
}


Determining if the include file floatingpoint.h exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-3ucQaF

Run Build Command(s):/usr/bin/ninja cmTC_dfe7f && [1/2] Building C object CMakeFiles/cmTC_dfe7f.dir/CheckIncludeFile.c.o
FAILED: CMakeFiles/cmTC_dfe7f.dir/CheckIncludeFile.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_dfe7f.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-3ucQaF/CheckIncludeFile.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-3ucQaF/CheckIncludeFile.c:1:10: fatal error: floatingpoint.h: No such file or directory
    1 | #include <floatingpoint.h>
      |          ^~~~~~~~~~~~~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.



Determining if the include file ieeefp.h exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-PTCaDu

Run Build Command(s):/usr/bin/ninja cmTC_5ad2a && [1/2] Building C object CMakeFiles/cmTC_5ad2a.dir/CheckIncludeFile.c.o
FAILED: CMakeFiles/cmTC_5ad2a.dir/CheckIncludeFile.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_5ad2a.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-PTCaDu/CheckIncludeFile.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-PTCaDu/CheckIncludeFile.c:1:10: fatal error: ieeefp.h: No such file or directory
    1 | #include <ieeefp.h>
      |          ^~~~~~~~~~
compilation terminated.
ninja: build stopped: subcommand failed.



Determining if the function cos exists failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OcHnQw

Run Build Command(s):/usr/bin/ninja cmTC_a2caf && [1/2] Building C object CMakeFiles/cmTC_a2caf.dir/CheckFunctionExists.c.o
<command-line>: warning: conflicting types for built-in function ‘cos’; expected ‘double(double)’ [-Wbuiltin-declaration-mismatch]
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OcHnQw/CheckFunctionExists.c:7:3: note: in expansion of macro ‘CHECK_FUNCTION_EXISTS’
    7 |   CHECK_FUNCTION_EXISTS(void);
      |   ^~~~~~~~~~~~~~~~~~~~~
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-OcHnQw/CheckFunctionExists.c:1:1: note: ‘cos’ is declared in header ‘<math.h>’
  +++ |+#include <math.h>
    1 | #ifdef CHECK_FUNCTION_EXISTS
[2/2] Linking C executable cmTC_a2caf
FAILED: cmTC_a2caf 
: && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp -DCHECK_FUNCTION_EXISTS=cos -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0   -rdynamic CMakeFiles/cmTC_a2caf.dir/CheckFunctionExists.c.o -o cmTC_a2caf   && :
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_a2caf.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `cos'
collect2: error: ld returned 1 exit status
ninja: build stopped: subcommand failed.



Determining if the isnand exist failed with the following output:
Change Dir: /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-983UGV

Run Build Command(s):/usr/bin/ninja cmTC_822ba && [1/2] Building C object CMakeFiles/cmTC_822ba.dir/CheckSymbolExists.c.o
FAILED: CMakeFiles/cmTC_822ba.dir/CheckSymbolExists.c.o 
/usr/bin/x86_64-pc-linux-gnu-gcc -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -D__EXTENSIONS__   -std=gnu99 -pipe -march=native -fno-diagnostics-color -O2 -fopenmp  -fno-diagnostics-color -o CMakeFiles/cmTC_822ba.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-983UGV/CheckSymbolExists.c
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-983UGV/CheckSymbolExists.c: In function ‘main’:
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-983UGV/CheckSymbolExists.c:9:19: error: ‘isnand’ undeclared (first use in this function); did you mean ‘isnanl’?
    9 |   return ((int*)(&isnand))[argc];
      |                   ^~~~~~
      |                   isnanl
/var/tmp/portage/sci-geosciences/gmt-6.4.0/work/gmt-6.4.0_build/CMakeFiles/CMakeScratch/TryCompile-983UGV/CheckSymbolExists.c:9:19: note: each undeclared identifier is reported only once for each function it appears in
ninja: build stopped: subcommand failed.


File CheckSymbolExists.c:
/* */
#include <math.h>
#include <float.h>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef isnand
  return ((int*)(&isnand))[argc];
#else
  (void)argc;
  return 0;
#endif
}