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Gentoo's Bugzilla – Attachment 851354 Details for
Bug 894622
sci-biology/seqan-3.1.0: The SDSL library is required, but wasn't found
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CMakeError.log
CMakeError.log (text/plain), 5.63 KB, created by
Toralf Förster
on 2023-02-15 18:30:39 UTC
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Description:
CMakeError.log
Filename:
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Creator:
Toralf Förster
Created:
2023-02-15 18:30:39 UTC
Size:
5.63 KB
patch
obsolete
>Performing C++ SOURCE FILE Test CONCEPTS_FLAG_BUILTIN failed with the following output: >Change Dir: /var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-UIUWou > >Run Build Command(s):/usr/bin/ninja cmTC_f2fcc && [1/2] Building CXX object CMakeFiles/cmTC_f2fcc.dir/src.cxx.o >FAILED: CMakeFiles/cmTC_f2fcc.dir/src.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DCONCEPTS_FLAG_BUILTIN -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/range-v3/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/cereal/include -pipe -march=native -fno-diagnostics-color -O2 -pipe -march=native -fno-diagnostics-color -O2 -fno-diagnostics-color -o CMakeFiles/cmTC_f2fcc.dir/src.cxx.o -c /var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-UIUWou/src.cxx >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-UIUWou/src.cxx:1:16: error: â__cpp_conceptsâ was not declared in this scope > 1 | static_assert (__cpp_concepts >= 201507); > | ^~~~~~~~~~~~~~ >ninja: build stopped: subcommand failed. > > >Source file was: >static_assert (__cpp_concepts >= 201507); > int main() {} > >Determining if the include file sdsl/version.hpp exists failed with the following output: >Change Dir: /var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-RXlMhw > >Run Build Command(s):/usr/bin/ninja cmTC_5f7e7 && [1/2] Building CXX object CMakeFiles/cmTC_5f7e7.dir/CheckIncludeFile.cxx.o >FAILED: CMakeFiles/cmTC_5f7e7.dir/CheckIncludeFile.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/range-v3/include -I/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/cereal/include -pipe -march=native -fno-diagnostics-color -O2 -pipe -march=native -fno-diagnostics-color -O2 -fno-diagnostics-color -o CMakeFiles/cmTC_5f7e7.dir/CheckIncludeFile.cxx.o -c /var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-RXlMhw/CheckIncludeFile.cxx >In file included from /var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source_build/CMakeFiles/CMakeScratch/TryCompile-RXlMhw/CheckIncludeFile.cxx:1: >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:27:11: error: âuint8_tâ does not name a type > 27 | constexpr uint8_t sdsl_version_major = SDSL_VERSION_MAJOR; > | ^~~~~~~ >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:12:1: note: âuint8_tâ is defined in header â<cstdint>â; did you forget to â#include <cstdint>â? > 11 | #include <string> > +++ |+#include <cstdint> > 12 | >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:29:11: error: âuint8_tâ does not name a type > 29 | constexpr uint8_t sdsl_version_minor = SDSL_VERSION_MINOR; > | ^~~~~~~ >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:29:11: note: âuint8_tâ is defined in header â<cstdint>â; did you forget to â#include <cstdint>â? >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:31:11: error: âuint8_tâ does not name a type > 31 | constexpr uint8_t sdsl_version_patch = SDSL_VERSION_PATCH; > | ^~~~~~~ >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:31:11: note: âuint8_tâ is defined in header â<cstdint>â; did you forget to â#include <cstdint>â? >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:34:49: error: âsdsl_version_majorâ was not declared in this scope; did you mean âsdsl_versionâ? > 34 | std::string const sdsl_version = std::to_string(sdsl_version_major) + "." + std::to_string(sdsl_version_minor) + "." + > | ^~~~~~~~~~~~~~~~~~ > | sdsl_version >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:34:92: error: âsdsl_version_minorâ was not declared in this scope; did you mean âsdsl_versionâ? > 34 | std::string const sdsl_version = std::to_string(sdsl_version_major) + "." + std::to_string(sdsl_version_minor) + "." + > | ^~~~~~~~~~~~~~~~~~ > | sdsl_version >/var/tmp/portage/sci-biology/seqan-3.1.0/work/seqan3-3.1.0-Source/submodules/sdsl-lite/include/sdsl/version.hpp:35:49: error: âsdsl_version_patchâ was not declared in this scope; did you mean âsdsl_versionâ? > 35 | std::to_string(sdsl_version_patch); > | ^~~~~~~~~~~~~~~~~~ > | sdsl_version >ninja: build stopped: subcommand failed. > > >
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