sci-mathematics:petsc-3.18.2:20230107-164112.log

sci-mathematics:petsc-3.18.2:20230107-164112.log (text/plain), 31.73 KB, created by Toralf Förster on 2023-01-07 18:10:54 UTC

 * Package:    sci-mathematics/petsc-3.18.2:0
 * Repository: gentoo
 * Maintainer: [e-mail] [e-mail]
 * USE:        X abi_x86_64 amd64 elibc_glibc examples fortran kernel_linux mpi threads userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
 * Checking whether python3_11 is suitable ...
 *   >=dev-lang/python-3.11.1:3.11 ...
 [ ok ]
 * Using python3.11 to build (via PYTHON_COMPAT iteration)
>>> Unpacking source...
>>> Unpacking petsc-3.18.2.tar.gz to /var/tmp/portage/sci-mathematics/petsc-3.18.2/work
>>> Source unpacked in /var/tmp/portage/sci-mathematics/petsc-3.18.2/work
>>> Preparing source in /var/tmp/portage/sci-mathematics/petsc-3.18.2/work/petsc-3.18.2 ...
 * Applying petsc-3.7.0-disable-rpath.patch ...
 [ ok ]
 * Applying petsc-3.16.0-fix_sandbox_violation.patch ...
patching file config/PETSc/options/installDir.py
Hunk #1 succeeded at 36 with fuzz 1 (offset -4 lines).
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-mathematics/petsc-3.18.2/work/petsc-3.18.2 ...
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64/petscdir/lib64 scrollOutput=1 AR=x86_64-pc-linux-gnu-ar CFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC CPPFLAGS= CXXFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC CXXOPTFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC FCFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC FFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 MAKEFLAGS= RANLIB=x86_64-pc-linux-gnu-ranlib --prefix=/usr/lib64/petscdir/ --with-blas-lapack-lib=-lblas -llapack  --with-cmake:BOOL=1 --with-gnu-compilers --with-imagemagick=0 --with-petsc-arch=linux-gnu-c-opt --with-precision=double --with-python=0 --with-shared-libraries --with-single-library --with-windows-graphics=0 --with-debugging=0 --with-fortran=1 --with-mpi=1 --with-mpi-compilers=1 --with-pthread=1 --with-scalar-type=real --with-cc=mpicc --with-cxx=mpicxx --with-afterimage=0 --with-hypre=0 --with-superlu=0 --with-ptscotch=0 --with-scalapack=0 --with-mumps=0 --with-fc=mpif77 --without-boost --without-fftw --without-hdf5 --with-x --with-x11
=============================================================================================
                         Configuring PETSc to compile on your system
=============================================================================================
TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:1045)
TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:20)
TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:22)
TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29)
TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24)
TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35)
TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20)
TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:29)
TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:42)
TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:31)
TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:70)
TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:62)
TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:46)
TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:84)
TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15)
TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:23)
TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:28)
TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2648)
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: CFLAGS=-pipe -march=native -fno-diagnostics-color -O2.
  Ignoring it, since its also set on command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: CXXFLAGS=-pipe -march=native -fno-diagnostics-color -O2.
  Ignoring it, since its also set on command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: FCFLAGS=-pipe -march=native -fno-diagnostics-color -O2.
  Ignoring it, since its also set on command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: FFLAGS=-pipe -march=native -fno-diagnostics-color -O2.
  Ignoring it, since its also set on command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: LDFLAGS=-Wl,-O1 -Wl,--as-needed
  -Wl,--defsym=__gentoo_check_ldflags__=0. Ignoring it, since its also set on command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: AR=x86_64-pc-linux-gnu-ar. Ignoring it, since its also set on
  command line
=============================================================================================
=============================================================================================
                                     ***** WARNING *****
  Found environment variable: RANLIB=x86_64-pc-linux-gnu-ranlib. Ignoring it, since its
  also set on command line
=============================================================================================
TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2665)
TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:2618)
TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:2639)
TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:723)
TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1341)
TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1384)
TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1690)
TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:747)
TESTING: checkCxxDialect from config.setCompilers(config/BuildSystem/config/setCompilers.py:769)
TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1726)
TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1420)
TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:747)
TESTING: checkHIPCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1490)
TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:747)
TESTING: checkSYCLCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1560)
TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:747)
TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1828)
TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1864)
TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1883)
TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:2054)
TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:2153)
TESTING: checkArchiverRecipeArgfile from config.setCompilers(config/BuildSystem/config/setCompilers.py:2222)
TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2304)
TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:2004)
TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:2418)
TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:2452)
TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2498)
TESTING: checkPragma from config.setCompilers(config/BuildSystem/config/setCompilers.py:1963)
TESTING: checkAtFileOption from config.setCompilers(config/BuildSystem/config/setCompilers.py:2690)
TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:2547)
TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:38)
TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:82)
TESTING: checkIntelHardwareSupport from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:173)
TESTING: checkCompilerMacros from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:164)
TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1384)
TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:359)
TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:370)
TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:162)
TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1335)
TESTING: checkCxxRestrict from config.compilers(config/BuildSystem/config/compilers.py:121)
TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:389)
TESTING: checkCxxComplexFix from config.compilers(config/BuildSystem/config/compilers.py:416)
TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:445)
TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:787)
TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:825)
TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:835)
TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1300)
TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1452)
TESTING: checkFortranTypeSizes from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:56)
TESTING: checkFortranPreprocessor from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:73)
TESTING: checkFortranDefineCompilerOption from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:96)
TESTING: checkFortran90 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:147)
TESTING: checkFortran90FreeForm from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:174)
TESTING: checkFortran2003 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:188)
TESTING: checkFortran90Array from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:223)
TESTING: checkFortran90AssumedType from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:310)
TESTING: checkFortranModuleInclude from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:316)
TESTING: checkFortranModuleOutput from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:382)
TESTING: checkFortranTypeStar from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:136)
TESTING: checkFortranTypeInitialize from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:126)
TESTING: configureFortranFlush from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:116)
TESTING: checkDependencyGenerationFlag from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:427)
TESTING: checkFortran90LineLength from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:163)
TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:107)
TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:141)
TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:176)
TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:198)
TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:204)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: check from config.headers(config/BuildSystem/config/headers.py:77)
TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:219)
TESTING: configureL1CacheLineSize from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:127)
TESTING: check_struct_sigaction from config.types(config/BuildSystem/config/types.py:42)
TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:48)
TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:54)
TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:64)
TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:59)
TESTING: checkPID from config.types(config/BuildSystem/config/types.py:70)
TESTING: checkUID from config.types(config/BuildSystem/config/types.py:74)
TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:81)
TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:95)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:106)
TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:140)
TESTING: checkMaxPathLen from config.types(config/BuildSystem/config/types.py:162)
TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:28)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:297)
TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:318)
TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:327)
TESTING: checkMathLgamma from config.libraries(config/BuildSystem/config/libraries.py:336)
TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:349)
TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:357)
TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:366)
TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:382)
TESTING: checkExecutableExportFlag from config.libraries(config/BuildSystem/config/libraries.py:608)
TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:38)
TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:98)
TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:106)
TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125)
TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:131)
TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:137)
TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:167)
TESTING: checkMemmove from config.functions(config/BuildSystem/config/functions.py:173)
TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:143)
TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:153)
TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:159)
TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:85)
TESTING: checkMmap from config.functions(config/BuildSystem/config/functions.py:179)
TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31)
TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:26)
TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:26)
TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13)
TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:54)
TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:60)
TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:80)
TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:97)
TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:123)
TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:33)
TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:48)
TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:92)
TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:98)
TESTING: checkSymbolResolution from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:107)
TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:42)
TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:83)
TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:21)
TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:43)
TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:73)
TESTING: consistencyChecks from config.packages.make(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.make(config/BuildSystem/config/package.py:997)
TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:96)
TESTING: setupGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:150)
TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:197)
TESTING: locateBison from config.packages.bison(config/BuildSystem/config/packages/bison.py:30)
TESTING: consistencyChecks from config.packages.sycl(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.sycl(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.hip(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.hip(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.X(config/BuildSystem/config/package.py:1001)
TESTING: checkDependencies from config.packages.X(config/BuildSystem/config/package.py:900)
TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:926)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86)
TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86)
TESTING: checkVersion from config.packages.X(config/BuildSystem/config/package.py:1068)
TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:993)
TESTING: consistencyChecks from config.packages.hwloc(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.thrust(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.cuda(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.OpenMPI(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.MPICH(config/BuildSystem/config/package.py:1001)
TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:997)
TESTING: consistencyChecks from config.packages.MPI(config/BuildSystem/config/package.py:1001)
TESTING: checkDependencies from config.packages.MPI(config/BuildSystem/config/package.py:900)
TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:859)
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:168)
TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86)
TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86)
TESTING: checkMPIDistro from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:660)
TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:379)
TESTING: configureMPI3 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:447)
TESTING: configureMPI4 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:516)
TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:188)
=============================================================================================
                                     ***** WARNING *****
  mpiexec may not work on your system due to network issues. Perhaps you have VPN running
  whose network settings may not work with mpiexec or your network is misconfigured
=============================================================================================
TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:544)
TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:588)
TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:598)
TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:614)

*******************************************************************************
         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
-------------------------------------------------------------------------------
Fortran error! mpi_init() could not be located!
*******************************************************************************

 * ERROR: sci-mathematics/petsc-3.18.2::gentoo failed (configure phase):
 *   econf failed
 * 
 * Call stack:
 *               ebuild.sh, line  136:  Called src_configure
 *             environment, line 2818:  Called econf 'scrollOutput=1' 'AR=x86_64-pc-linux-gnu-ar' 'CFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC' 'CPPFLAGS=' 'CXXFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC' 'CXXOPTFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC' 'FCFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC' 'FFLAGS=-pipe -march=native -fno-diagnostics-color -O2 -fPIC' 'LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' 'MAKEFLAGS=' 'RANLIB=x86_64-pc-linux-gnu-ranlib' '--prefix=/usr/lib64/petscdir/' '--with-blas-lapack-lib=-lblas -llapack ' '--with-cmake:BOOL=1' '--with-gnu-compilers' '--with-imagemagick=0' '--with-petsc-arch=linux-gnu-c-opt' '--with-precision=double' '--with-python=0' '--with-shared-libraries' '--with-single-library' '--with-windows-graphics=0' '--with-debugging=0' '--with-fortran=1' '--with-mpi=1' '--with-mpi-compilers=1' '--with-pthread=1' '--with-scalar-type=real' '--with-cc=mpicc' '--with-cxx=mpicxx' '--with-afterimage=0' '--with-hypre=0' '--with-superlu=0' '--with-ptscotch=0' '--with-scalapack=0' '--with-mumps=0' '--with-fc=mpif77' '--without-boost' '--without-fftw' '--without-hdf5' '--with-x' '--with-x11'
 *        phase-helpers.sh, line  730:  Called __helpers_die 'econf failed'
 *   isolated-functions.sh, line  112:  Called die
 * The specific snippet of code:
 *   		die "$@"
 * 
 * If you need support, post the output of `emerge --info '=sci-mathematics/petsc-3.18.2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-mathematics/petsc-3.18.2::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-mathematics:petsc-3.18.2:20230107-164112.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-mathematics/petsc-3.18.2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-mathematics/petsc-3.18.2/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-mathematics/petsc-3.18.2/work/petsc-3.18.2'
 * S: '/var/tmp/portage/sci-mathematics/petsc-3.18.2/work/petsc-3.18.2'