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Gentoo's Bugzilla – Attachment 835611 Details for
Bug 882403
sci-libs/h5part-1.6.6 fails to compile on ppc
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build.log on ppc
sci-libs_h5part-1.6.6_use_UQP4Q (text/plain), 10.84 KB, created by
Arthur Zamarin
on 2022-11-21 18:17:14 UTC
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Description:
build.log on ppc
Filename:
MIME Type:
Creator:
Arthur Zamarin
Created:
2022-11-21 18:17:14 UTC
Size:
10.84 KB
patch
obsolete
> * Package: sci-libs/h5part-1.6.6:0 > * Repository: gentoo > * Maintainer: junghans@gentoo.org sci@gentoo.org > * USE: elibc_glibc kernel_linux ppc userland_GNU > * FEATURES: compressdebug network-sandbox preserve-libs sandbox splitdebug test userpriv usersandbox >>>> Unpacking source... >>>> Unpacking H5Part-1.6.6.tar.gz to /var/tmp/portage/sci-libs/h5part-1.6.6/work >>>> Source unpacked in /var/tmp/portage/sci-libs/h5part-1.6.6/work >>>> Preparing source in /var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6 ... > * Applying h5part-1.6.6-mpio.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6 ... > * econf: updating H5Part-1.6.6/config.guess with /usr/share/gnuconfig/config.guess > * econf: updating H5Part-1.6.6/config.sub with /usr/share/gnuconfig/config.sub >./configure --prefix=/usr --build=powerpc-unknown-linux-gnu --host=powerpc-unknown-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --docdir=/usr/share/doc/h5part-1.6.6 --htmldir=/usr/share/doc/h5part-1.6.6/html --libdir=/usr/lib --enable-parallel --enable-shared --disable-static CC=mpicc CXX=mpicxx >checking for a BSD-compatible install... /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c >checking whether build environment is sane... yes >checking for a thread-safe mkdir -p... /bin/mkdir -p >checking for gawk... gawk >checking whether make sets $(MAKE)... yes >checking build system type... powerpc-unknown-linux-gnu >checking host system type... powerpc-unknown-linux-gnu >checking whether make sets $(MAKE)... (cached) yes >checking for powerpc-unknown-linux-gnu-mpicc... mpicc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether mpicc accepts -g... yes >checking for mpicc option to accept ISO C89... none needed >checking for style of include used by make... GNU >checking dependency style of mpicc... none >checking whether we are using the GNU C++ compiler... yes >checking whether mpicxx accepts -g... yes >checking dependency style of mpicxx... none >checking for a BSD-compatible install... /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c >checking for gawk... (cached) gawk >checking if debug is enabled... no >checking if fortran interface enabled... no >checking how to print strings... printf >checking for a sed that does not truncate output... /bin/sed >checking for grep that handles long lines and -e... /bin/grep >checking for egrep... /bin/grep -E >checking for fgrep... /bin/grep -F >checking for ld used by mpicc... /usr/powerpc-unknown-linux-gnu/bin/ld >checking if the linker (/usr/powerpc-unknown-linux-gnu/bin/ld) is GNU ld... yes >checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B >checking the name lister (/usr/bin/nm -B) interface... BSD nm >checking whether ln -s works... yes >checking the maximum length of command line arguments... 1572864 >checking whether the shell understands some XSI constructs... yes >checking whether the shell understands "+="... yes >checking for /usr/powerpc-unknown-linux-gnu/bin/ld option to reload object files... -r >checking for powerpc-unknown-linux-gnu-objdump... powerpc-unknown-linux-gnu-objdump >checking how to recognize dependent libraries... pass_all >checking for powerpc-unknown-linux-gnu-ar... powerpc-unknown-linux-gnu-ar >checking for powerpc-unknown-linux-gnu-strip... powerpc-unknown-linux-gnu-strip >checking for powerpc-unknown-linux-gnu-ranlib... powerpc-unknown-linux-gnu-ranlib >checking command to parse /usr/bin/nm -B output from mpicc object... ok >checking how to run the C preprocessor... mpicc -E >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for dlfcn.h... yes >checking for objdir... .libs >checking if mpicc supports -fno-rtti -fno-exceptions... no >checking for mpicc option to produce PIC... -fPIC -DPIC >checking if mpicc PIC flag -fPIC -DPIC works... yes >checking if mpicc static flag -static works... no >checking if mpicc supports -c -o file.o... yes >checking if mpicc supports -c -o file.o... (cached) yes >checking whether the mpicc linker (/usr/powerpc-unknown-linux-gnu/bin/ld) supports shared libraries... yes >checking whether -lc should be explicitly linked in... no >checking dynamic linker characteristics... GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking whether stripping libraries is possible... yes >checking if libtool supports shared libraries... yes >checking whether to build shared libraries... yes >checking whether to build static libraries... no >checking how to run the C++ preprocessor... mpicxx -E >checking for ld used by mpicxx... /usr/powerpc-unknown-linux-gnu/bin/ld >checking if the linker (/usr/powerpc-unknown-linux-gnu/bin/ld) is GNU ld... yes >checking whether the mpicxx linker (/usr/powerpc-unknown-linux-gnu/bin/ld) supports shared libraries... yes >checking for mpicxx option to produce PIC... -fPIC -DPIC >checking if mpicxx PIC flag -fPIC -DPIC works... yes >checking if mpicxx static flag -static works... no >checking if mpicxx supports -c -o file.o... yes >checking if mpicxx supports -c -o file.o... (cached) yes >checking whether the mpicxx linker (/usr/powerpc-unknown-linux-gnu/bin/ld) supports shared libraries... yes >checking dynamic linker characteristics... (cached) GNU/Linux ld.so >checking how to hardcode library paths into programs... immediate >checking if parallel interface enabled... yes >checking if we can compile MPI code without setting flags... yes >checking whether tools are enabled... no >checking for HDF5 root ... >checking looking in /usr ... ... found >checking if we need to link to libsz ... no >checking fcntl.h usability... yes >checking fcntl.h presence... yes >checking for fcntl.h... yes >checking for stdlib.h... (cached) yes >checking for string.h... (cached) yes >checking for unistd.h... (cached) yes >checking for stdbool.h that conforms to C99... yes >checking for _Bool... yes >checking for int64_t... yes >checking for size_t... yes >checking for ssize_t... yes >checking for stdlib.h... (cached) yes >checking for GNU libc compatible malloc... yes >checking for memset... yes >checking for pow... yes >checking for strchr... yes >checking for strdup... yes >configure: creating ./config.status >config.status: creating Makefile >config.status: creating src/Makefile >config.status: creating doc/Makefile >config.status: creating test/Makefile >config.status: creating tools/Makefile >config.status: creating config.h >config.status: executing depfiles commands >config.status: executing libtool commands > >Summary: > >Host OS: linux-gnu >Host CPU: powerpc >Host vendor: unknown >Build libraries: libH5Part >Build test programs: test >Build tools: >CC = mpicc >CXX = mpicxx >FC = >CFLAGS = -O2 -mcpu=powerpc -mtune=powerpc -pipe -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK >CXXFLAGS = -O2 -mcpu=powerpc -mtune=powerpc -pipe -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK >FFLAGS = -O2 -mcpu=powerpc -mtune=powerpc -pipe -DPARALLEL_IO >INCLUDES = -I/usr/include >LDFLAGS = -Wl,-O1 -Wl,--as-needed -L/usr/lib >LIBS = -lhdf5 -lz -lm >HDF5ROOT = /usr > >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6 ... >make --jobs=16 --load-average=15 >make all-recursive >make[1]: Entering directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6' >Making all in doc >make[2]: Entering directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6/doc' >make[2]: Nothing to be done for 'all'. >make[2]: Leaving directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6/doc' >Making all in src >make[2]: Entering directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6/src' >/bin/sh ../libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -O2 -mcpu=powerpc -mtune=powerpc -pipe -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c -o H5Part.lo H5Part.c >libtool: compile: mpicc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -O2 -mcpu=powerpc -mtune=powerpc -pipe -DPARALLEL_IO -DMPICH_IGNORE_CXX_SEEK -c H5Part.c -fPIC -DPIC -o .libs/H5Part.o >In file included from [01m[K/usr/include/H5public.h:32[m[K, > from [01m[K/usr/include/hdf5.h:22[m[K, > from [01m[KH5Part.c:82[m[K: >[01m[KH5Part.c:[m[K In function '[01m[K_H5Part_iteration_operator2[m[K': >[01m[KH5Part.c:2095:11:[m[K [01;31m[Kerror: [m[Ktoo few arguments to function '[01m[KH5Oget_info_by_name3[m[K' > 2095 | if( [01;31m[KH5Oget_info_by_name[m[K( group_id, member_name, &objinfo, H5P_DEFAULT ) < 0 ) { > | [01;31m[K^~~~~~~~~~~~~~~~~~~[m[K >In file included from [01m[K/usr/include/H5Apublic.h:22[m[K, > from [01m[K/usr/include/hdf5.h:23[m[K: >[01m[K/usr/include/H5Opublic.h:521:15:[m[K [01;36m[Knote: [m[Kdeclared here > 521 | H5_DLL herr_t [01;36m[KH5Oget_info_by_name3[m[K(hid_t loc_id, const char *name, H5O_info2_t *oinfo, unsigned fields, > | [01;36m[K^~~~~~~~~~~~~~~~~~~~[m[K >[01m[KH5Part.c:2145:21:[m[K [01;31m[Kerror: [m[Ktoo few arguments to function '[01m[KH5Oget_info3[m[K' > 2145 | else if ( [01;31m[KH5Oget_info[m[K ( obj_id, &objinfo ) < 0 ) { > | [01;31m[K^~~~~~~~~~~[m[K >[01m[K/usr/include/H5Opublic.h:484:15:[m[K [01;36m[Knote: [m[Kdeclared here > 484 | H5_DLL herr_t [01;36m[KH5Oget_info3[m[K(hid_t loc_id, H5O_info2_t *oinfo, unsigned fields); > | [01;36m[K^~~~~~~~~~~~[m[K >make[2]: *** [Makefile:385: H5Part.lo] Error 1 >make[2]: Leaving directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6/src' >make[1]: *** [Makefile:284: all-recursive] Error 1 >make[1]: Leaving directory '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6' >make: *** [Makefile:214: all] Error 2 > * ERROR: sci-libs/h5part-1.6.6::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-libs/h5part-1.6.6::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-libs/h5part-1.6.6::gentoo'`. > * The complete build log is located at '/var/tmp/portage/sci-libs/h5part-1.6.6/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-libs/h5part-1.6.6/temp/environment'. > * Working directory: '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6' > * S: '/var/tmp/portage/sci-libs/h5part-1.6.6/work/H5Part-1.6.6'
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bug 882403
: 835611