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Gentoo's Bugzilla – Attachment 811729 Details for
Bug 871444
app-containers/apptainer-1.0.3 - make: [Makefile:<snip>: apptainer] Error 2
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app-containers:apptainer-1.0.3:20220918-134631.log
app-containers:apptainer-1.0.3:20220918-134631.log (text/plain), 9.24 KB, created by
Toralf Förster
on 2022-09-18 14:10:09 UTC
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Description:
app-containers:apptainer-1.0.3:20220918-134631.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2022-09-18 14:10:09 UTC
Size:
9.24 KB
patch
obsolete
> * Package: app-containers/apptainer-1.0.3:0 > * Repository: gentoo > * Maintainer: marecki@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux network suid userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > * Determining the location of the kernel source code > * Found kernel source directory: > * /usr/src/linux > * Found sources for kernel version: > * 5.19.9-gentoo-dist > * Checking for suitable kernel configuration options ... > [ ok ] >>>> Unpacking source... >>>> Unpacking apptainer-1.0.3.tar.gz to /var/tmp/portage/app-containers/apptainer-1.0.3/work >>>> Source unpacked in /var/tmp/portage/app-containers/apptainer-1.0.3/work >>>> Preparing source in /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3 ... > * Applying apptainer-1.0.2-trim_upstream_cflags.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3 ... >Configuring for project `apptainer' with languages: C, Golang >=> running pre-basechecks project specific checks ... >=> running base system checks ... > checking: host C compiler... clang > checking: host C++ compiler... clang++ > checking: host Go compiler (at least version 1.16.12)... /usr/bin/go > checking: host C compiler option -Wall... no > checking: host C compiler option -Wfatal-errors... no > checking: host C compiler option -Wno-unknown-warning-option... no > checking: host C compiler option -Wstrict-prototypes... no > checking: host C compiler option -Wpointer-arith... no > checking: host C compiler option -Wbad-function-cast... no > checking: host C compiler option -Woverlength-strings... no > checking: host C compiler option -Wframe-larger-than=2047... no > checking: host C compiler option -Wno-sign-compare... no > checking: host C compiler option -Wclobbered... no > checking: host C compiler option -Wempty-body... no > checking: host C compiler option -Wmissing-parameter-type... no > checking: host C compiler option -Wtype-limits... no > checking: host C compiler option -Wunused-parameter... no > checking: host C compiler option -Wunused-but-set-parameter... no > checking: host C compiler option -Wno-discarded-qualifiers... no > checking: host C compiler option -Wno-incompatible-pointer-types... no > checking: host C compiler option -pipe... no > checking: host C compiler option -fmessage-length=0... no > checking: host C compiler option -fPIC... no > checking: host `ar' path... /usr/bin/ar > checking: host `ld' path... /usr/bin/ld > checking: host `ranlib' path... /usr/bin/ranlib > checking: host `objcopy' path... /usr/bin/objcopy > checking: target C compiler... clang > checking: target C++ compiler... clang++ > checking: target `ar' path... /usr/bin/ar > checking: target `ld' path... /usr/bin/ld > checking: target `ranlib' path... /usr/bin/ranlib > checking: target `objcopy' path... /usr/bin/objcopy > checking: host compiles static binaries... yes > checking: target compiles static binaries... yes > checking: host os type... unix > checking: host architecture... x86_64 > checking: target architecture... x86_64 > checking: host architecture word size... 64 > checking: target architecture word size... 64 > checking: project version... 1.0.3 > checking: project short version... 1.0.3 >=> running post-basechecks project specific checks ... > checking: namespace: CLONE_NEWPID... yes > checking: namespace: CLONE_FS... yes > checking: namespace: CLONE_NEWNS... yes > checking: namespace: CLONE_NEWUSER... yes > checking: namespace: CLONE_NEWIPC... yes > checking: namespace: CLONE_NEWNET... yes > checking: namespace: CLONE_NEWUTS... yes > checking: namespace: CLONE_NEWCGROUP... yes > checking: feature: NO_NEW_PRIVS... yes > checking: feature: MS_SLAVE... yes > checking: feature: MS_REC... yes > checking: feature: MS_PRIVATE... yes > checking: user capabilities... yes > checking: header linux/securebits.h... yes > checking: header linux/capability.h... yes > checking: libseccomp+headers... yes > >Finding paths to external executables. >These paths are written into apptainer.conf and can be overridden there. > > checking: cryptsetup... yes (/sbin/cryptsetup) > checking: go... yes (/usr/bin/go) > checking: ldconfig... yes (/sbin/ldconfig) > checking: mksquashfs... yes (/usr/bin/mksquashfs) > checking: nvidia-container-cli... no > checking: unsquashfs... yes (/usr/bin/unsquashfs) > >=> generating fragments ... >=> building Makefile ... >=> generating apptainer.spec ... >=> project apptainer setup with : > - host arch: x86_64 > - host wordsize: 64-bit > - host C compiler: clang > - host Go compiler: /usr/bin/go > - host system: unix > --- > - target arch: x86_64 > - target wordsize: 64-bit > - target C compiler: clang > --- > - config profile: release > --- > - SUID install: yes > - Network plugins: yes > --- > - verbose: yes > --- > - cryptsetup: /sbin/cryptsetup > --- > - version: 1.0.3 >=> /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir/Makefile ready, try: > $ cd /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir > $ make >>>> Source configured. >'/var/tmp/portage/app-containers/apptainer-1.0.3/temp/clang14.log' -> '/var/tmp/clang/app-containers/apptainer-1.0.3/clang14.log' >'/var/tmp/portage/app-containers/apptainer-1.0.3/temp/clang15.log' -> '/var/tmp/clang/app-containers/apptainer-1.0.3/clang15.log' >>>> Compiling source in /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3 ... >make -j4 -C builddir >make: Entering directory '/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir' > GEN GO DEP /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir/singularity.d >/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/makeit/gengodep -v3 "/usr/bin/go" "apptainer_SOURCE" "containers_image_openpgp sylog oci_engine apptainer_engine fakeroot_engine apparmor selinux seccomp" "/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir/singularity.d" "/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/cmd/apptainer" > GEN GO DEP /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir/starter.d >/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/makeit/gengodep -v3 "/usr/bin/go" "starter_SOURCE" "containers_image_openpgp sylog oci_engine apptainer_engine fakeroot_engine apparmor selinux seccomp" "/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir/starter.d" "/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/cmd/starter" > GEN /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/go-generate >/usr/bin/go run -mod=vendor /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/expand-env.go < /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/go-generate.in > /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/go-generate >chmod +x /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/go-generate >rm -f /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/internal/pkg/buildcfg/config.go >cd /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/internal/pkg/buildcfg && /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/scripts/go-generate > GO apptainer > [+] GO_TAGS "containers_image_openpgp sylog oci_engine apptainer_engine fakeroot_engine apparmor selinux seccomp" >/usr/bin/go build -mod=vendor -buildmode=pie -tags "containers_image_openpgp sylog oci_engine apptainer_engine fakeroot_engine apparmor selinux seccomp" -ldflags="-B 0x`head -c20 /dev/urandom|od -An -tx1|tr -d ' \n'`" -gcflags=github.com/apptainer/apptainer/...="-trimpath /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3=>github.com/apptainer/apptainer@v0.0.0" -asmflags=github.com/apptainer/apptainer/...="-trimpath /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3=>github.com/apptainer/apptainer@v0.0.0" \ > -o ./apptainer /var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/cmd/apptainer ># github.com/seccomp/libseccomp-golang >../vendor/github.com/seccomp/libseccomp-golang/seccomp_internal.go:619:7: duplicate case (_Ciconst_C_ACT_KILL_THREAD) (constant 0 of type C.uint) in expression switch > ../vendor/github.com/seccomp/libseccomp-golang/seccomp_internal.go:615:7: previous case >make: *** [Makefile:183: apptainer] Error 2 >make: Leaving directory '/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3/builddir' > * ERROR: app-containers/apptainer-1.0.3::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=app-containers/apptainer-1.0.3::gentoo'`, > * the complete build log and the output of `emerge -pqv '=app-containers/apptainer-1.0.3::gentoo'`. > * The complete build log is located at '/var/log/portage/app-containers:apptainer-1.0.3:20220918-134631.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/app-containers/apptainer-1.0.3/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/app-containers/apptainer-1.0.3/temp/environment'. > * Working directory: '/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3' > * S: '/var/tmp/portage/app-containers/apptainer-1.0.3/work/apptainer-1.0.3' >
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bug 871444
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