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Gentoo's Bugzilla – Attachment 758781 Details for
Bug 829080
sci-libs/flann-1.9.1-r3[cuda] fails to compile
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build.log
build.log (text/x-log), 52.56 KB, created by
Miroslav Šulc
on 2021-12-13 10:23:05 UTC
(
hide
)
Description:
build.log
Filename:
MIME Type:
Creator:
Miroslav Šulc
Created:
2021-12-13 10:23:05 UTC
Size:
52.56 KB
patch
obsolete
>[32m * [39;49;00mPackage: sci-libs/flann-1.9.1-r3 >[32m * [39;49;00mRepository: gentoo >[32m * [39;49;00mMaintainer: sci@gentoo.org >[32m * [39;49;00mUSE: abi_x86_64 amd64 cuda elibc_glibc kernel_linux mpi openmp userland_GNU >[32m * [39;49;00mFEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking flann-1.9.1.tar.gz to /var/tmp/portage/sci-libs/flann-1.9.1-r3/work >>>> Source unpacked in /var/tmp/portage/sci-libs/flann-1.9.1-r3/work >>>> Preparing source in /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1 ... > [32m*[0m Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1" > [32m*[0m Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build" > [32m*[0m Applying flann-1.9.1-cmake-3.11.patch ... >[A[308C [34;01m[ [32;01mok[34;01m ][0m > [32m*[0m Applying flann-1.9.1-cmake-3.11-1.patch ... >[A[308C [34;01m[ [32;01mok[34;01m ][0m > [32m*[0m Applying flann-1.9.1-cuda-9.patch ... >[A[308C [34;01m[ [32;01mok[34;01m ][0m > [32m*[0m Applying flann-1.9.1-system-lz4.patch ... >patching file CMakeLists.txt >patching file cmake/flann.pc.in >patching file examples/CMakeLists.txt >Hunk #2 succeeded at 15 with fuzz 1. >patching file src/cpp/CMakeLists.txt >patching file src/cpp/flann/util/serialization.h >[A[308C [34;01m[ [32;01mok[34;01m ][0m > [32m*[0m Hardcoded definition(s) removed in CMakeLists.txt: > [32m*[0m set(CMAKE_BUILD_TYPE RelWithDebInfo CACHE STRING "Build type" FORCE) >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1 ... > [32m*[0m Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1" > [32m*[0m Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build" >cmake -C /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_C_BINDINGS=ON -DBUILD_PYTHON_BINDINGS=OFF -DPYTHON_EXECUTABLE= -DBUILD_CUDA_LIB=yes -DBUILD_EXAMPLES=no -DBUILD_DOC=no -DBUILD_TESTS=OFF -DBUILD_MATLAB_BINDINGS=no -DUSE_MPI=yes -DUSE_OPENMP=yes -DCUDA_NVCC_FLAGS=-O2 -v --compiler-bindir "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1" --compiler-options "-march=native -O2 -pipe -frecord-gcc-switches" --linker-options "-O1,--as-needed" --linker-options "-arsch" -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/gentoo_toolchain.cmake /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1 >loading initial cache file /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/gentoo_common_config.cmake >[0mCMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): > Compatibility with CMake < 2.8.12 will be removed from a future version of > CMake. > > Update the VERSION argument <min> value or use a ...<max> suffix to tell > CMake that the project does not need compatibility with older versions. > >[0m >-- The C compiler identification is GNU 11.2.1 >-- The CXX compiler identification is GNU 11.2.1 >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped >-- Detecting C compile features >-- Detecting C compile features - done >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/mpicxx - skipped >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) >-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libmpi.so;/usr/lib64/libz.so;/usr/lib64/libdl.a;/usr/lib64/libm.so (found version "1.10.5") >-- Found MPI_C: /usr/lib64/libmpi.so (found version "3.1") >-- Found MPI_CXX: /usr/bin/mpicxx (found version "3.1") >-- Found MPI: TRUE (found version "3.1") >-- Found Boost: /usr/lib64/cmake/Boost-1.78.0/BoostConfig.cmake (found version "1.78.0") found components: mpi system serialization thread >[33mCMake Warning (dev) at /usr/lib64/cmake/GTest/GTestConfig.cmake:37 (if): > if given arguments: > > "ON" > > An argument named "ON" appears in a conditional statement. Policy CMP0012 > is not set: if() recognizes numbers and boolean constants. Run "cmake > --help-policy CMP0012" for policy details. Use the cmake_policy command to > set the policy and suppress this warning. >Call Stack (most recent call first): > /usr/share/cmake/Modules/FindGTest.cmake:187 (find_package) > CMakeLists.txt:115 (find_package) >This warning is for project developers. Use -Wno-dev to suppress it. >[0m >-- Found GTest: /usr/lib64/cmake/GTest/GTestConfig.cmake (found version "1.11.0") >-- Found OpenMP_C: -fopenmp (found version "4.5") >-- Found OpenMP_CXX: -fopenmp (found version "4.5") >-- Found OpenMP: TRUE (found version "4.5") >-- Found Threads: TRUE >-- Found CUDA: /opt/cuda (found version "11.5") >-- CUDA found (include: /opt/cuda/include, lib: /opt/cuda/lib64/libcudart_static.a;Threads::Threads;dl;/usr/lib64/librt.a) >-- Found PkgConfig: /usr/bin/x86_64-pc-linux-gnu-pkg-config (found version "1.8.0") >-- Checking for module 'liblz4' >-- Found liblz4, version 1.9.3 >-- Install prefix: /usr >-- Build type: Gentoo >-- Building C bindings: ON >-- Building examples: no >-- Building tests: OFF >-- Building documentation: no >-- Building python bindings: OFF >-- Building matlab bindings: no >-- Building CUDA library: yes >-- Using OpenMP support: yes >-- Using MPI support: yes >-- <<< Gentoo configuration >>> >Build type Gentoo >Install path /usr >Compiler flags: >C -march=native -O2 -pipe -frecord-gcc-switches -fopenmp >C++ -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp >Linker flags: >Executable -Wl,-O1 -Wl,--as-needed >Module -Wl,-O1 -Wl,--as-needed >Shared -Wl,-O1 -Wl,--as-needed > >-- Configuring done >-- Generating done >-- Build files have been written to: /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1 ... > [32m*[0m Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1" > [32m*[0m Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build" >ninja -v -j1 -l0 >[1/19] /usr/bin/mpicxx -DFLANN_USE_CUDA -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wall -Wno-unknown-pragmas -Wno-unused-function -fPIC -MD -MT src/cpp/CMakeFiles/flann_cpp_s.dir/flann/flann_cpp.cpp.o -MF src/cpp/CMakeFiles/flann_cpp_s.dir/flann/flann_cpp.cpp.o.d -o src/cpp/CMakeFiles/flann_cpp_s.dir/flann/flann_cpp.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann_cpp.cpp >In file included from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/params.h:33, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.hpp:42, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann_cpp.cpp:30: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h: In member function âvirtual void flann::anyimpl::big_any_policy<T>::static_delete(void**)â: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:9: warning: this âifâ clause does not guard... [-Wmisleading-indentation] > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^~ >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the âifâ > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^ >[2/19] : && /usr/bin/cmake -E rm -f lib/libflann_cpp_s.a && /usr/bin/x86_64-pc-linux-gnu-ar qc lib/libflann_cpp_s.a src/cpp/CMakeFiles/flann_cpp_s.dir/flann/flann_cpp.cpp.o && /usr/bin/x86_64-pc-linux-gnu-ranlib lib/libflann_cpp_s.a && : >[3/19] /usr/bin/mpicxx -DFLANN_EXPORTS -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -fPIC -Wall -Wno-unknown-pragmas -Wno-unused-function -MD -MT src/cpp/CMakeFiles/flann_cpp.dir/empty.cpp.o -MF src/cpp/CMakeFiles/flann_cpp.dir/empty.cpp.o.d -o src/cpp/CMakeFiles/flann_cpp.dir/empty.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/empty.cpp >[4/19] : && /usr/bin/mpicxx -fPIC -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wl,-O1 -Wl,--as-needed -shared -Wl,-soname,libflann_cpp.so.1.9 -o lib/libflann_cpp.so.1.9.1 src/cpp/CMakeFiles/flann_cpp.dir/empty.cpp.o -Wl,-whole-archive lib/libflann_cpp_s.a -Wl,-no-whole-archive -Wl,--push-state,--no-as-needed -llz4 -Wl,--pop-state && : >[5/19] /usr/bin/cmake -E cmake_symlink_library lib/libflann_cpp.so.1.9.1 lib/libflann_cpp.so.1.9 lib/libflann_cpp.so && : >[6/19] /usr/bin/mpicxx -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wall -Wno-unknown-pragmas -Wno-unused-function -MD -MT src/cpp/CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o -MF src/cpp/CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o.d -o src/cpp/CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/flann_mpi_server.cpp >In file included from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/params.h:33, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.hpp:42, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/index.h:35, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/server.h:33, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/flann_mpi_server.cpp:2: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h: In member function âvirtual void flann::anyimpl::big_any_policy<T>::static_delete(void**)â: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:9: warning: this âifâ clause does not guard... [-Wmisleading-indentation] > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^~ >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the âifâ > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^ >In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, > from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, > from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, > from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, > from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, > from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, > from /usr/include/boost/shared_ptr.hpp:17, > from /usr/include/boost/mpi/communicator.hpp:21, > from /usr/include/boost/mpi/collectives.hpp:21, > from /usr/include/boost/mpi.hpp:23, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/flann_mpi_server.cpp:1: >/usr/include/boost/bind.hpp: At global scope: >/usr/include/boost/bind.hpp:36:1: note: â#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.â > 36 | BOOST_PRAGMA_MESSAGE( > | ^~~~~~~~~~~~~~~~~~~~ >[7/19] : && /usr/bin/mpicxx -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wl,-O1 -Wl,--as-needed -rdynamic src/cpp/CMakeFiles/flann_mpi_server.dir/flann/mpi/flann_mpi_server.cpp.o -o bin/flann_mpi_server -Wl,-rpath,/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/lib: lib/libflann_cpp.so.1.9.1 -lhdf5 -lmpi -lz -Wl,-Bstatic -ldl -Wl,-Bdynamic -lm /usr/lib64/libboost_mpi.so.1.78.0 /usr/lib64/libboost_system.so.1.78.0 /usr/lib64/libboost_serialization.so.1.78.0 /usr/lib64/libboost_thread.so.1.78.0 -Wl,-whole-archive lib/libflann_cpp_s.a -Wl,-no-whole-archive -Wl,--push-state,--no-as-needed -llz4 -Wl,--pop-state && : >[8/19] /usr/bin/mpicxx -DBOOST_MPI_DYN_LINK -DBOOST_MPI_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wall -Wno-unknown-pragmas -Wno-unused-function -MD -MT src/cpp/CMakeFiles/flann_mpi_client.dir/flann/mpi/flann_mpi_client.cpp.o -MF src/cpp/CMakeFiles/flann_mpi_client.dir/flann/mpi/flann_mpi_client.cpp.o.d -o src/cpp/CMakeFiles/flann_mpi_client.dir/flann/mpi/flann_mpi_client.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/flann_mpi_client.cpp >In file included from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/params.h:33, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/mpi/flann_mpi_client.cpp:6: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h: In member function âvirtual void flann::anyimpl::big_any_policy<T>::static_delete(void**)â: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:9: warning: this âifâ clause does not guard... [-Wmisleading-indentation] > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^~ >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the âifâ > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^ >[9/19] : && /usr/bin/mpicxx -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wl,-O1 -Wl,--as-needed -rdynamic src/cpp/CMakeFiles/flann_mpi_client.dir/flann/mpi/flann_mpi_client.cpp.o -o bin/flann_mpi_client -Wl,-rpath,/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/lib: lib/libflann_cpp.so.1.9.1 -lhdf5 -lmpi -lz -Wl,-Bstatic -ldl -Wl,-Bdynamic -lm /usr/lib64/libboost_mpi.so.1.78.0 /usr/lib64/libboost_system.so.1.78.0 /usr/lib64/libboost_serialization.so.1.78.0 /usr/lib64/libboost_thread.so.1.78.0 -Wl,-whole-archive lib/libflann_cpp_s.a -Wl,-no-whole-archive -Wl,--push-state,--no-as-needed -llz4 -Wl,--pop-state && : >[10/19] /usr/bin/mpicxx -DFLANN_STATIC -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wall -Wno-unknown-pragmas -Wno-unused-function -fPIC -MD -MT src/cpp/CMakeFiles/flann_s.dir/flann/flann.cpp.o -MF src/cpp/CMakeFiles/flann_s.dir/flann/flann.cpp.o.d -o src/cpp/CMakeFiles/flann_s.dir/flann/flann.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.cpp >In file included from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/params.h:33, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.hpp:42, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.h:603, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/flann.cpp:31: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h: In member function âvirtual void flann::anyimpl::big_any_policy<T>::static_delete(void**)â: >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:9: warning: this âifâ clause does not guard... [-Wmisleading-indentation] > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^~ >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/any.h:81:55: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the âifâ > 81 | if (* x) delete (* reinterpret_cast<T**>(x)); *x = NULL; > | ^ >[11/19] : && /usr/bin/cmake -E rm -f lib/libflann_s.a && /usr/bin/x86_64-pc-linux-gnu-ar qc lib/libflann_s.a src/cpp/CMakeFiles/flann_s.dir/flann/flann.cpp.o && /usr/bin/x86_64-pc-linux-gnu-ranlib lib/libflann_s.a && : >[12/19] /usr/bin/mpicxx -DFLANN_EXPORTS -DHAVE_MPI -D_FLANN_VERSION=1.9.1 -I/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp -I/opt/cuda/include -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -fPIC -Wall -Wno-unknown-pragmas -Wno-unused-function -MD -MT src/cpp/CMakeFiles/flann.dir/empty.cpp.o -MF src/cpp/CMakeFiles/flann.dir/empty.cpp.o.d -o src/cpp/CMakeFiles/flann.dir/empty.cpp.o -c /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/empty.cpp >[13/19] : && /usr/bin/mpicxx -fPIC -march=native -O2 -pipe -frecord-gcc-switches -std=c++11 -fopenmp -Wl,-O1 -Wl,--as-needed -shared -Wl,-soname,libflann.so.1.9 -o lib/libflann.so.1.9.1 src/cpp/CMakeFiles/flann.dir/empty.cpp.o -Wl,-whole-archive lib/libflann_s.a -Wl,-no-whole-archive && : >[14/19] /usr/bin/cmake -E cmake_symlink_library lib/libflann.so.1.9.1 lib/libflann.so.1.9 lib/libflann.so && : >[15/19] cd /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/. && /usr/bin/cmake -D verbose:BOOL=OFF -D build_configuration:STRING=Gentoo -D generated_file:STRING=/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o -D generated_cubin_file:STRING=/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.cubin.txt -P /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.Gentoo.cmake >[31mFAILED: [0msrc/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o >cd /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/. && /usr/bin/cmake -D verbose:BOOL=OFF -D build_configuration:STRING=Gentoo -D generated_file:STRING=/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o -D generated_cubin_file:STRING=/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.cubin.txt -P /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.Gentoo.cmake >CMake Warning (dev) at flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.Gentoo.cmake:75: > Syntax Warning in cmake code at column 215 > > Argument not separated from preceding token by whitespace. >This warning is for project developers. Use -Wno-dev to suppress it. > >#$ _NVVM_BRANCH_=nvvm >#$ _SPACE_= >#$ _CUDART_=cudart >#$ _HERE_=/opt/cuda/bin >#$ _THERE_=/opt/cuda/bin >#$ _TARGET_SIZE_= >#$ _TARGET_DIR_= >#$ _TARGET_DIR_=targets/x86_64-linux >#$ TOP=/opt/cuda/bin/.. >#$ NVVMIR_LIBRARY_DIR=/opt/cuda/bin/../nvvm/libdevice >#$ LD_LIBRARY_PATH=/opt/cuda/bin/../lib: >#$ PATH=/opt/cuda/bin/../nvvm/bin:/opt/cuda/bin:/usr/lib/portage/python3.10/ebuild-helpers/xattr:/usr/lib/portage/python3.10/ebuild-helpers:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/13/bin:/usr/lib/llvm/12/bin:/opt/eagle/bin:/opt/cuda/bin >#$ INCLUDES="-I/opt/cuda/bin/../targets/x86_64-linux/include" >#$ LIBRARIES= "-L/opt/cuda/bin/../targets/x86_64-linux/lib/stubs" "-L/opt/cuda/bin/../targets/x86_64-linux/lib" >#$ CUDAFE_FLAGS= >#$ PTXAS_FLAGS= >#$ "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1"/gcc -std=c++11 -D__CUDA_ARCH__=520 -D__CUDA_ARCH_LIST__=520 -E -x c++ -DCUDA_DOUBLE_MATH_FUNCTIONS -D__CUDACC__ -D__NVCC__ "-march=native" "-O2" "-pipe" "-frecord-gcc-switches" "-fopenmp" -march=native -O2 -pipe -frecord-gcc-switches -fPIC -O2 -I"/opt/cuda/include" -I"/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp" -I"/usr/include" "-I/opt/cuda/bin/../targets/x86_64-linux/include" -D "__CUDACC__" -D "FLANN_STATIC" -D "HAVE_MPI" -D "_FLANN_VERSION=1.9.1" -D "FLANN_USE_CUDA" -D "NVCC" -D__CUDACC_VER_MAJOR__=11 -D__CUDACC_VER_MINOR__=5 -D__CUDACC_VER_BUILD__=119 -D__CUDA_API_VER_MAJOR__=11 -D__CUDA_API_VER_MINOR__=5 -D__NVCC_DIAG_PRAGMA_SUPPORT__=1 -include "cuda_runtime.h" -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_0000006b_00000000-5_kdtree_cuda_3d_index.cpp1.ii" >In file included from /opt/cuda/include/thrust/detail/config/config.h:27, > from /opt/cuda/include/thrust/detail/config.h:23, > from /opt/cuda/include/thrust/gather.h:24, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/thrust/detail/config/cpp_dialect.h:131:13: warning: Thrust requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define THRUST_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 131 | THRUST_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /opt/cuda/include/cub/util_arch.cuh:36, > from /opt/cuda/include/thrust/system/cuda/detail/util.h:32, > from /opt/cuda/include/thrust/system/cuda/detail/for_each.h:35, > from /opt/cuda/include/thrust/system/detail/adl/for_each.h:42, > from /opt/cuda/include/thrust/detail/for_each.inl:27, > from /opt/cuda/include/thrust/for_each.h:277, > from /opt/cuda/include/thrust/system/detail/generic/transform.inl:19, > from /opt/cuda/include/thrust/system/detail/generic/transform.h:104, > from /opt/cuda/include/thrust/detail/transform.inl:27, > from /opt/cuda/include/thrust/transform.h:721, > from /opt/cuda/include/thrust/system/detail/generic/gather.inl:21, > from /opt/cuda/include/thrust/system/detail/generic/gather.h:79, > from /opt/cuda/include/thrust/detail/gather.inl:27, > from /opt/cuda/include/thrust/gather.h:444, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/cub/util_cpp_dialect.cuh:142:13: warning: CUB requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define CUB_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 142 | CUB_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >#$ "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1"/gcc -std=c++11 -D__CUDA_ARCH_LIST__=520 -E -x c++ -D__CUDACC__ -D__NVCC__ "-march=native" "-O2" "-pipe" "-frecord-gcc-switches" "-fopenmp" -march=native -O2 -pipe -frecord-gcc-switches -fPIC -O2 -I"/opt/cuda/include" -I"/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp" -I"/usr/include" "-I/opt/cuda/bin/../targets/x86_64-linux/include" -D "__CUDACC__" -D "FLANN_STATIC" -D "HAVE_MPI" -D "_FLANN_VERSION=1.9.1" -D "FLANN_USE_CUDA" -D "NVCC" -D__CUDACC_VER_MAJOR__=11 -D__CUDACC_VER_MINOR__=5 -D__CUDACC_VER_BUILD__=119 -D__CUDA_API_VER_MAJOR__=11 -D__CUDA_API_VER_MINOR__=5 -D__NVCC_DIAG_PRAGMA_SUPPORT__=1 -include "cuda_runtime.h" -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_0000006b_00000000-6_kdtree_cuda_3d_index.cpp4.ii" >In file included from /opt/cuda/include/thrust/detail/config/config.h:27, > from /opt/cuda/include/thrust/detail/config.h:23, > from /opt/cuda/include/thrust/gather.h:24, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/thrust/detail/config/cpp_dialect.h:131:13: warning: Thrust requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define THRUST_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 131 | THRUST_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /opt/cuda/include/cub/util_arch.cuh:36, > from /opt/cuda/include/thrust/system/cuda/detail/util.h:32, > from /opt/cuda/include/thrust/system/cuda/detail/for_each.h:35, > from /opt/cuda/include/thrust/system/detail/adl/for_each.h:42, > from /opt/cuda/include/thrust/detail/for_each.inl:27, > from /opt/cuda/include/thrust/for_each.h:277, > from /opt/cuda/include/thrust/system/detail/generic/transform.inl:19, > from /opt/cuda/include/thrust/system/detail/generic/transform.h:104, > from /opt/cuda/include/thrust/detail/transform.inl:27, > from /opt/cuda/include/thrust/transform.h:721, > from /opt/cuda/include/thrust/system/detail/generic/gather.inl:21, > from /opt/cuda/include/thrust/system/detail/generic/gather.h:79, > from /opt/cuda/include/thrust/detail/gather.inl:27, > from /opt/cuda/include/thrust/gather.h:444, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/cub/util_cpp_dialect.cuh:142:13: warning: CUB requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define CUB_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 142 | CUB_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >#$ -- Filter Dependencies -- > /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.NVCC-depend >#$ _NVVM_BRANCH_=nvvm >#$ _SPACE_= >#$ _CUDART_=cudart >#$ _HERE_=/opt/cuda/bin >#$ _THERE_=/opt/cuda/bin >#$ _TARGET_SIZE_= >#$ _TARGET_DIR_= >#$ _TARGET_DIR_=targets/x86_64-linux >#$ TOP=/opt/cuda/bin/.. >#$ NVVMIR_LIBRARY_DIR=/opt/cuda/bin/../nvvm/libdevice >#$ LD_LIBRARY_PATH=/opt/cuda/bin/../lib: >#$ PATH=/opt/cuda/bin/../nvvm/bin:/opt/cuda/bin:/usr/lib/portage/python3.10/ebuild-helpers/xattr:/usr/lib/portage/python3.10/ebuild-helpers:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/13/bin:/usr/lib/llvm/12/bin:/opt/eagle/bin:/opt/cuda/bin >#$ INCLUDES="-I/opt/cuda/bin/../targets/x86_64-linux/include" >#$ LIBRARIES= "-L/opt/cuda/bin/../targets/x86_64-linux/lib/stubs" "-L/opt/cuda/bin/../targets/x86_64-linux/lib" >#$ CUDAFE_FLAGS= >#$ PTXAS_FLAGS= >#$ "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1"/gcc -std=c++11 -D__CUDA_ARCH__=520 -D__CUDA_ARCH_LIST__=520 -E -x c++ -DCUDA_DOUBLE_MATH_FUNCTIONS -D__CUDACC__ -D__NVCC__ "-march=native" "-O2" "-pipe" "-frecord-gcc-switches" "-fopenmp" -march=native -O2 -pipe -frecord-gcc-switches -fPIC -O2 -I"/opt/cuda/include" -I"/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp" -I"/usr/include" "-I/opt/cuda/bin/../targets/x86_64-linux/include" -D "FLANN_STATIC" -D "HAVE_MPI" -D "_FLANN_VERSION=1.9.1" -D "FLANN_USE_CUDA" -D "NVCC" -D__CUDACC_VER_MAJOR__=11 -D__CUDACC_VER_MINOR__=5 -D__CUDACC_VER_BUILD__=119 -D__CUDA_API_VER_MAJOR__=11 -D__CUDA_API_VER_MINOR__=5 -D__NVCC_DIAG_PRAGMA_SUPPORT__=1 -include "cuda_runtime.h" -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-7_kdtree_cuda_3d_index.cpp1.ii" >In file included from /opt/cuda/include/thrust/detail/config/config.h:27, > from /opt/cuda/include/thrust/detail/config.h:23, > from /opt/cuda/include/thrust/gather.h:24, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/thrust/detail/config/cpp_dialect.h:131:13: warning: Thrust requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define THRUST_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 131 | THRUST_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /opt/cuda/include/cub/util_arch.cuh:36, > from /opt/cuda/include/thrust/system/cuda/detail/util.h:32, > from /opt/cuda/include/thrust/system/cuda/detail/for_each.h:35, > from /opt/cuda/include/thrust/system/detail/adl/for_each.h:42, > from /opt/cuda/include/thrust/detail/for_each.inl:27, > from /opt/cuda/include/thrust/for_each.h:277, > from /opt/cuda/include/thrust/system/detail/generic/transform.inl:19, > from /opt/cuda/include/thrust/system/detail/generic/transform.h:104, > from /opt/cuda/include/thrust/detail/transform.inl:27, > from /opt/cuda/include/thrust/transform.h:721, > from /opt/cuda/include/thrust/system/detail/generic/gather.inl:21, > from /opt/cuda/include/thrust/system/detail/generic/gather.h:79, > from /opt/cuda/include/thrust/detail/gather.inl:27, > from /opt/cuda/include/thrust/gather.h:444, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/cub/util_cpp_dialect.cuh:142:13: warning: CUB requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define CUB_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 142 | CUB_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >#$ cicc --c++11 --gnu_version=110201 --display_error_number --orig_src_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" --orig_src_path_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" --allow_managed -arch compute_52 -m64 --no-version-ident -ftz=0 -prec_div=1 -prec_sqrt=1 -fmad=1 --include_file_name "tmpxft_00000075_00000000-3_kdtree_cuda_3d_index.fatbin.c" -tused --gen_module_id_file --module_id_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-4_kdtree_cuda_3d_index.module_id" --gen_c_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.c" --stub_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.stub.c" --gen_device_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.gpu" "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-7_kdtree_cuda_3d_index.cpp1.ii" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.ptx" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/serialization.h(726): warning #68-D: integer conversion resulted in a change of sign > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L2<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L2<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L2_Simple<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L2_Simple<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L1<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L1<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >#$ ptxas -arch=sm_52 -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.ptx" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-8_kdtree_cuda_3d_index.sm_52.cubin" >#$ fatbinary -64 --cicc-cmdline="-ftz=0 -prec_div=1 -prec_sqrt=1 -fmad=1 " "--image3=kind=elf,sm=52,file=/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-8_kdtree_cuda_3d_index.sm_52.cubin" "--image3=kind=ptx,sm=52,file=/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.ptx" --embedded-fatbin="/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-3_kdtree_cuda_3d_index.fatbin.c" >#$ rm /var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-3_kdtree_cuda_3d_index.fatbin >#$ "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1"/gcc -std=c++11 -D__CUDA_ARCH_LIST__=520 -E -x c++ -D__CUDACC__ -D__NVCC__ "-march=native" "-O2" "-pipe" "-frecord-gcc-switches" "-fopenmp" -march=native -O2 -pipe -frecord-gcc-switches -fPIC -O2 -I"/opt/cuda/include" -I"/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp" -I"/usr/include" "-I/opt/cuda/bin/../targets/x86_64-linux/include" -D "FLANN_STATIC" -D "HAVE_MPI" -D "_FLANN_VERSION=1.9.1" -D "FLANN_USE_CUDA" -D "NVCC" -D__CUDACC_VER_MAJOR__=11 -D__CUDACC_VER_MINOR__=5 -D__CUDACC_VER_BUILD__=119 -D__CUDA_API_VER_MAJOR__=11 -D__CUDA_API_VER_MINOR__=5 -D__NVCC_DIAG_PRAGMA_SUPPORT__=1 -include "cuda_runtime.h" -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-5_kdtree_cuda_3d_index.cpp4.ii" >In file included from /opt/cuda/include/thrust/detail/config/config.h:27, > from /opt/cuda/include/thrust/detail/config.h:23, > from /opt/cuda/include/thrust/gather.h:24, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/thrust/detail/config/cpp_dialect.h:131:13: warning: Thrust requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define THRUST_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 131 | THRUST_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >In file included from /opt/cuda/include/cub/util_arch.cuh:36, > from /opt/cuda/include/thrust/system/cuda/detail/util.h:32, > from /opt/cuda/include/thrust/system/cuda/detail/for_each.h:35, > from /opt/cuda/include/thrust/system/detail/adl/for_each.h:42, > from /opt/cuda/include/thrust/detail/for_each.inl:27, > from /opt/cuda/include/thrust/for_each.h:277, > from /opt/cuda/include/thrust/system/detail/generic/transform.inl:19, > from /opt/cuda/include/thrust/system/detail/generic/transform.h:104, > from /opt/cuda/include/thrust/detail/transform.inl:27, > from /opt/cuda/include/thrust/transform.h:721, > from /opt/cuda/include/thrust/system/detail/generic/gather.inl:21, > from /opt/cuda/include/thrust/system/detail/generic/gather.h:79, > from /opt/cuda/include/thrust/detail/gather.inl:27, > from /opt/cuda/include/thrust/gather.h:444, > from /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu:35: >/opt/cuda/include/cub/util_cpp_dialect.cuh:142:13: warning: CUB requires at least C++14. C++11 is deprecated but still supported. C++11 support will be removed in a future release. Define CUB_IGNORE_DEPRECATED_CPP_DIALECT to suppress this message. > 142 | CUB_COMPILER_DEPRECATION_SOFT(C++14, C++11); > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >#$ cudafe++ --c++11 --gnu_version=110201 --display_error_number --orig_src_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" --orig_src_path_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu" --allow_managed --m64 --parse_templates --gen_c_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.cpp" --stub_file_name "tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.stub.c" --module_id_file_name "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-4_kdtree_cuda_3d_index.module_id" "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-5_kdtree_cuda_3d_index.cpp4.ii" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/util/serialization.h(726): warning #68-D: integer conversion resulted in a change of sign > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L2<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L2<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(788): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L2_Simple<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L2_Simple<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L2_Simple<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L2_Simple<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(807): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(70): warning #611-D: overloaded virtual function "flann::NNIndex<Distance>::buildIndex [with Distance=flann::L1<float>]" is only partially overridden in class "flann::KDTreeCuda3dIndex<flann::L1<float>>" > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(194): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.h(208): warning #997-D: overloaded function "flann::NNIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" is hidden by "flann::KDTreeCuda3dIndex<Distance>::knnSearch [with Distance=flann::L1<float>]" -- virtual function override intended? > detected during instantiation of class "flann::KDTreeCuda3dIndex<Distance> [with Distance=flann::L1<float>]" >/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp/flann/algorithms/kdtree_cuda_3d_index.cu(827): here > >#$ "/usr/x86_64-pc-linux-gnu/gcc-bin/11.2.1"/gcc -std=c++11 -D__CUDA_ARCH__=520 -D__CUDA_ARCH_LIST__=520 -c -x c++ -DCUDA_DOUBLE_MATH_FUNCTIONS "-march=native" "-O2" "-pipe" "-frecord-gcc-switches" "-fopenmp" -march=native -O2 -pipe -frecord-gcc-switches -fPIC -O2 -I"/opt/cuda/include" -I"/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1/src/cpp" -I"/usr/include" "-I/opt/cuda/bin/../targets/x86_64-linux/include" -m64 "/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/tmpxft_00000075_00000000-6_kdtree_cuda_3d_index.cudafe1.cpp" -o "/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o" >/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/bits/std_function.h:435:145: error: parameter packs not expanded with â...â: > 435 | function(_Functor&& __f) > | ^ >/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/bits/std_function.h:435:145: note: â_ArgTypesâ >/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/bits/std_function.h:530:146: error: parameter packs not expanded with â...â: > 530 | operator=(_Functor&& __f) > | ^ >/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/bits/std_function.h:530:146: note: â_ArgTypesâ ># --error 0x1 -- >CMake Error at flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o.Gentoo.cmake:282 (message): > Error generating file > /var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build/src/cpp/CMakeFiles/flann_cuda_s.dir/flann/algorithms/./flann_cuda_s_generated_kdtree_cuda_3d_index.cu.o > > >ninja: build stopped: subcommand failed. > [31;01m*[0m ERROR: sci-libs/flann-1.9.1-r3::gentoo failed (compile phase): > [31;01m*[0m ninja -v -j1 -l0 failed > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 127: Called src_compile > [31;01m*[0m environment, line 2242: Called cmake_src_compile > [31;01m*[0m environment, line 854: Called cmake_build > [31;01m*[0m environment, line 823: Called eninja > [31;01m*[0m environment, line 1411: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m "$@" || die "${nonfatal_args[@]}" "${*} failed" > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/flann-1.9.1-r3::gentoo'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/flann-1.9.1-r3::gentoo'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/flann-1.9.1-r3/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1_build' > [31;01m*[0m S: '/var/tmp/portage/sci-libs/flann-1.9.1-r3/work/flann-1.9.1'
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