CMakeError.log

CMakeError.log (text/plain), 10.30 KB, created by Toralf Förster on 2021-12-05 13:53:46 UTC

Performing C++ SOURCE FILE Test FINITE_VALUE_HAVE_GLOBAL_ISNAN failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake -f Makefile cmTC_2e172/fast && /usr/bin/gmake  -f CMakeFiles/cmTC_2e172.dir/build.make CMakeFiles/cmTC_2e172.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_2e172.dir/src.cxx.o
/usr/bin/mpicxx -DFINITE_VALUE_HAVE_GLOBAL_ISNAN   -pipe -march=native -fno-diagnostics-color -O2  -O3 -DNDEBUG -std=c++11 -o CMakeFiles/cmTC_2e172.dir/src.cxx.o -c /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx: In function ‘int main()’:
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:6:3: error: ‘isnan’ was not declared in this scope; did you mean ‘std::isnan’?
    6 |   isnan(x);
      |   ^~~~~
      |   std::isnan
In file included from /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:2:
/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/cmath:632:5: note: ‘std::isnan’ declared here
  632 |     isnan(_Tp __x)
      |     ^~~~~
gmake[1]: *** [CMakeFiles/cmTC_2e172.dir/build.make:78: CMakeFiles/cmTC_2e172.dir/src.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:127: cmTC_2e172/fast] Error 2


Source file was:

#include <cmath>
int main()
{
  double x = 1.0;
  isnan(x);
  return 0;
}
  
Performing C++ SOURCE FILE Test FINITE_VALUE_HAVE_GLOBAL_ISINF failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake -f Makefile cmTC_2840a/fast && /usr/bin/gmake  -f CMakeFiles/cmTC_2840a.dir/build.make CMakeFiles/cmTC_2840a.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_2840a.dir/src.cxx.o
/usr/bin/mpicxx -DFINITE_VALUE_HAVE_GLOBAL_ISINF   -pipe -march=native -fno-diagnostics-color -O2  -O3 -DNDEBUG -std=c++11 -o CMakeFiles/cmTC_2840a.dir/src.cxx.o -c /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx: In function ‘int main()’:
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:6:3: error: ‘isinf’ was not declared in this scope; did you mean ‘std::isinf’?
    6 |   isinf(x);
      |   ^~~~~
      |   std::isinf
In file included from /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:2:
/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/include/g++-v11/cmath:605:5: note: ‘std::isinf’ declared here
  605 |     isinf(_Tp __x)
      |     ^~~~~
gmake[1]: *** [CMakeFiles/cmTC_2840a.dir/build.make:78: CMakeFiles/cmTC_2840a.dir/src.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:127: cmTC_2840a/fast] Error 2


Source file was:

#include <cmath>
int main()
{
  double x = 1.0;
  isinf(x);
  return 0;
}
  
Performing C++ SOURCE FILE Test HAS_TPL_BINUNTILS_STACKTRACE failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake -f Makefile cmTC_5a50d/fast && /usr/bin/gmake  -f CMakeFiles/cmTC_5a50d.dir/build.make CMakeFiles/cmTC_5a50d.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_5a50d.dir/src.cxx.o
/usr/bin/mpicxx -DHAS_TPL_BINUNTILS_STACKTRACE   -pipe -march=native -fno-diagnostics-color -O2  -O3 -DNDEBUG -std=c++11 -o CMakeFiles/cmTC_5a50d.dir/src.cxx.o -c /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx
In file included from /usr/include/bfd.h:10,
                 from /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:11:
/usr/include/x86_64-pc-linux-gnu/bfd.h:35:2: error: #error config.h must be included before this header
   35 | #error config.h must be included before this header
      |  ^~~~~
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx: In function ‘void call_a_bunch_of_functions()’:
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:41:31: error: ‘bfd_get_section_flags’ was not declared in this scope; did you mean ‘bfd_set_section_flags’?
   41 |   const int status_bfd_gsf = (bfd_get_section_flags(abfd, section) & SEC_ALLOC);
      |                               ^~~~~~~~~~~~~~~~~~~~~
      |                               bfd_set_section_flags
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:43:25: error: ‘bfd_get_section_vma’ was not declared in this scope; did you mean ‘bfd_set_section_vma’?
   43 |   bfd_vma section_vma = bfd_get_section_vma(abfd, section);
      |                         ^~~~~~~~~~~~~~~~~~~
      |                         bfd_set_section_vma
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:45:49: error: cannot convert ‘bfd*’ to ‘const asection*’ {aka ‘const bfd_section*’}
   45 |   bfd_size_type section_size = bfd_section_size(abfd, section);
      |                                                 ^~~~
      |                                                 |
      |                                                 bfd*
In file included from /usr/include/bfd.h:10,
                 from /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.cxx:11:
/usr/include/x86_64-pc-linux-gnu/bfd.h:1196:35: note:   initializing argument 1 of ‘bfd_size_type bfd_section_size(const asection*)’
 1196 | bfd_section_size (const asection *sec)
      |                   ~~~~~~~~~~~~~~~~^~~
gmake[1]: *** [CMakeFiles/cmTC_5a50d.dir/build.make:78: CMakeFiles/cmTC_5a50d.dir/src.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:127: cmTC_5a50d/fast] Error 2


Source file was:

#include <string>
#include <iostream>
#include <fstream>
#include <cstdlib>
#include <cstdarg>
#include <csignal>
#include <execinfo.h>
#include <cxxabi.h>
#include <link.h>
#include <bfd.h>


int shared_lib_callback(struct dl_phdr_info *info,
  size_t size, void *_data)
{
  (void)info;
  (void)size;
  (void)_data;
  return 0;
}


void process_section(bfd *abfd, asection *section, void *_data)
{}


void call_a_bunch_of_functions()
{

  void **stacktrace_array = 0;
  const size_t stacktrace_size = backtrace(stacktrace_array, 0);

  int status_demangle = 0;
  char *filename_blob = 0;
  char *d = abi::__cxa_demangle(filename_blob, 0, 0, &status_demangle);

  asection *section = 0;
  bfd *abfd = 0;

  const int status_bfd_gsf = (bfd_get_section_flags(abfd, section) & SEC_ALLOC);

  bfd_vma section_vma = bfd_get_section_vma(abfd, section);

  bfd_size_type section_size = bfd_section_size(abfd, section);

  bfd_vma offset;
  asymbol **symbol_table = 0;
  unsigned int line;

  const char *filename=NULL, *function_name=NULL;
  const int line_found = bfd_find_nearest_line(abfd, section, symbol_table,
    offset, &filename, &function_name, &line);

  const int status_bfd_gff = (bfd_get_file_flags(abfd) & HAS_SYMS);
  void **symbol_table_ptr = 0;
  long n_symbols;
  unsigned int symbol_size;
  n_symbols = bfd_read_minisymbols(abfd, false, symbol_table_ptr, &symbol_size);
  
  abfd = bfd_openr(filename_blob, NULL);

  const int status_bfd_cf = bfd_check_format(abfd, bfd_archive);

  char **matching;
  const int status_bfd_cfm = bfd_check_format_matches(abfd, bfd_object, &matching);

  void *data = 0;
  bfd_map_over_sections(abfd, process_section, &data);
  
  bfd_close(abfd);

  struct match_data *match;
  const int status_dl_iphdr = dl_iterate_phdr(shared_lib_callback, &(*match));
  
}

 
int main()
{
  call_a_bunch_of_functions();
  return 0;
}

Performing C SOURCE FILE Test HAVE_SCOTCH_VERSION_6_0_3 failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake -f Makefile cmTC_ad8b1/fast && /usr/bin/gmake  -f CMakeFiles/cmTC_ad8b1.dir/build.make CMakeFiles/cmTC_ad8b1.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_ad8b1.dir/src.c.o
/usr/bin/mpicc -DHAVE_SCOTCH_VERSION_6_0_3   -pipe -march=native -fno-diagnostics-color -O2 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O3 -DNDEBUG -o CMakeFiles/cmTC_ad8b1.dir/src.c.o -c /var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.c
/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp/src.c:8:12: fatal error: scotch.h: No such file or directory
    8 |   #include <scotch.h>
      |            ^~~~~~~~~~
compilation terminated.
gmake[1]: *** [CMakeFiles/cmTC_ad8b1.dir/build.make:78: CMakeFiles/cmTC_ad8b1.dir/src.c.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/trilinos-13.0.1-r1/work/trilinos-13.0.1_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:127: cmTC_ad8b1/fast] Error 2


Source file was:

  #include <stdio.h>
  #include <stdint.h>
#ifdef TPL_ENABLE_MPI
  #include <mpi.h>
  #include <ptscotch.h>
#else
  #include <scotch.h>
#endif
  int main()
  {
    #if SCOTCH_VERSION > 6 
      return 0;
    #elif SCOTCH_VERSION == 6 && SCOTCH_RELEASE > 0
      return 0;
    #elif SCOTCH_VERSION == 6 && SCOTCH_RELEASE == 0 && SCOTCH_PATCHLEVEL >= 3
      return 0;
    #else
      scotch_version_failure
    #endif
  }