sci-libs:spqr-2.0.9-r1:20211121-030144.log

sci-libs:spqr-2.0.9-r1:20211121-030144.log (text/plain), 13.87 KB, created by Toralf Förster on 2021-11-21 11:47:07 UTC

 * Package:    sci-libs/spqr-2.0.9-r1
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux partition tbb userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox

>>> Unpacking source...
>>> Unpacking spqr-2.0.9.tar.bz2 to /var/tmp/portage/sci-libs/spqr-2.0.9-r1/work
>>> Source unpacked in /var/tmp/portage/sci-libs/spqr-2.0.9-r1/work
>>> Preparing source in /var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9 ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9 ...
 * econf: updating spqr-2.0.9/config/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating spqr-2.0.9/config/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/spqr-2.0.9-r1 --htmldir=/usr/share/doc/spqr-2.0.9-r1/html --with-sysroot=/ --libdir=/usr/lib64 --disable-static --without-doc --with-partition --with-tbb
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking how to print strings... printf
checking whether make supports the include directive... yes (GNU style)
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking whether x86_64-pc-linux-gnu-gcc understands -c and -o together... yes
checking dependency style of x86_64-pc-linux-gnu-gcc... none
checking for a sed that does not truncate output... /bin/sed
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checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
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checking how to associate runtime and link libraries... printf %s\n
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checking for archiver @FILE support... @
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checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
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checking how to truncate binary pipes... /bin/dd bs=4096 count=1
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checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
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checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking dependency style of x86_64-pc-linux-gnu-g++... none
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking float.h usability... yes
checking float.h presence... yes
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checking for string.h... (cached) yes
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checking for inline... inline
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checking for GNU libc compatible malloc... yes
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checking for sqrt in -lm... yes
checking whether to build user guide... no
checking for x86_64-pc-linux-gnu-pkg-config... /usr/bin/x86_64-pc-linux-gnu-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for suitesparseconfig... yes
checking SuiteSparse_config.h usability... yes
checking SuiteSparse_config.h presence... yes
checking for SuiteSparse_config.h... yes
checking for SuiteSparse_malloc in -lsuitesparseconfig... yes
checking for x86_64-pc-linux-gnu-g77... no
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checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v
checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran...  -L/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/../../.. -lgfortran -lm -lquadmath
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for blas... yes
checking for lapack... yes
checking for cholmod... yes
checking cholmod.h usability... yes
checking cholmod.h presence... yes
checking for cholmod.h... yes
checking for cholmod_metis in -lcholmod... yes
checking for tbb... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Demo/Makefile
config.status: creating Doc/Makefile
config.status: creating Source/Makefile
config.status: creating spqr.pc
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9 ...
make -j4 
make  all-recursive
make[1]: Entering directory '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9'
Making all in Source
make[2]: Entering directory '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9/Source'
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I..  -I../Include  -DHAVE_TBB=1  -I/usr/include/metis    -pipe -march=native -fno-diagnostics-color -O2 -c -o spqr_rmap.lo spqr_rmap.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I..  -I../Include  -DHAVE_TBB=1  -I/usr/include/metis    -pipe -march=native -fno-diagnostics-color -O2 -c -o SuiteSparseQR_C.lo SuiteSparseQR_C.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I..  -I../Include  -DHAVE_TBB=1  -I/usr/include/metis    -pipe -march=native -fno-diagnostics-color -O2 -c -o SuiteSparseQR_expert.lo SuiteSparseQR_expert.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I..  -I../Include  -DHAVE_TBB=1  -I/usr/include/metis    -pipe -march=native -fno-diagnostics-color -O2 -c -o spqr_parallel.lo spqr_parallel.cpp
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../Include -DHAVE_TBB=1 -I/usr/include/metis -pipe -march=native -fno-diagnostics-color -O2 -c spqr_rmap.cpp  -fPIC -DPIC -o .libs/spqr_rmap.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../Include -DHAVE_TBB=1 -I/usr/include/metis -pipe -march=native -fno-diagnostics-color -O2 -c SuiteSparseQR_expert.cpp  -fPIC -DPIC -o .libs/SuiteSparseQR_expert.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../Include -DHAVE_TBB=1 -I/usr/include/metis -pipe -march=native -fno-diagnostics-color -O2 -c SuiteSparseQR_C.cpp  -fPIC -DPIC -o .libs/SuiteSparseQR_C.o
libtool: compile:  x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../Include -DHAVE_TBB=1 -I/usr/include/metis -pipe -march=native -fno-diagnostics-color -O2 -c spqr_parallel.cpp  -fPIC -DPIC -o .libs/spqr_parallel.o
spqr_parallel.cpp:10:10: fatal error: tbb/task_scheduler_init.h: No such file or directory
   10 | #include <tbb/task_scheduler_init.h>
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[2]: *** [Makefile:575: spqr_parallel.lo] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: Leaving directory '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9/Source'
make[1]: *** [Makefile:536: all-recursive] Error 1
make[1]: Leaving directory '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9'
make: *** [Makefile:423: all] Error 2
 * ERROR: sci-libs/spqr-2.0.9-r1::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-libs/spqr-2.0.9-r1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-libs/spqr-2.0.9-r1::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-libs:spqr-2.0.9-r1:20211121-030144.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9'
 * S: '/var/tmp/portage/sci-libs/spqr-2.0.9-r1/work/spqr-2.0.9'