* Package: sci-libs/xdrfile-1.1.4 * Repository: gentoo * Maintainer: alexxy@gentoo.org sci-chemistry@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc fortran kernel_linux userland_GNU * FEATURES: compressdebug network-sandbox preserve-libs sandbox userpriv usersandbox * Package: sci-libs/xdrfile-1.1.4 * Repository: gentoo * Maintainer: alexxy@gentoo.org sci-chemistry@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc fortran kernel_linux userland_GNU * FEATURES: compressdebug network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking xdrfile-1.1.4.tar.gz to /var/tmp/portage/sci-libs/xdrfile-1.1.4/work >>> Source unpacked in /var/tmp/portage/sci-libs/xdrfile-1.1.4/work >>> Preparing source in /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4 ... * econf: updating xdrfile-1.1.4/config.guess with /usr/share/gnuconfig/config.guess * econf: updating xdrfile-1.1.4/config.sub with /usr/share/gnuconfig/config.sub * econf: updating xdrfile-1.1.4/config/config.guess with /usr/share/gnuconfig/config.guess * econf: updating xdrfile-1.1.4/config/config.sub with /usr/share/gnuconfig/config.sub ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --docdir=/usr/share/doc/xdrfile-1.1.4 --htmldir=/usr/share/doc/xdrfile-1.1.4/html --libdir=/usr/lib64 configure: loading site script /usr/share/config.site checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for gawk... gawk checking whether make sets $(MAKE)... yes checking how to create a ustar tar archive... gnutar checking for x86_64-pc-linux-gnu-cc... no checking for x86_64-pc-linux-gnu-icc... no checking for x86_64-pc-linux-gnu-xlc... no checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of x86_64-pc-linux-gnu-gcc... none checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking whether x86_64-pc-linux-gnu-gcc accepts -O3... yes checking whether x86_64-pc-linux-gnu-gcc accepts -msse2... yes checking whether x86_64-pc-linux-gnu-gcc accepts -funroll-all-loops... yes checking whether x86_64-pc-linux-gnu-gcc accepts -std=gnu99... yes checking whether x86_64-pc-linux-gnu-gcc accepts -fexcess-precision=fast... yes ****************************************** * Using CFLAGS from environment variable * ****************************************** checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... pass_all checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking dependency style of x86_64-pc-linux-gnu-g++... none checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok checking for objdir... .libs checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking rpc/rpc.h usability... no checking rpc/rpc.h presence... no checking for rpc/rpc.h... no checking for rpc/xdr.h... no checking for xdr_float in -lnsl... no configure: WARNING: Couldn't find XDR headers and/or libraries - using our own checking for working memcmp... yes checking return type of signal handlers... void checking for vprintf... yes checking for _doprnt... no checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether byte ordering is bigendian... (cached) no configure: creating ./config.status config.status: creating Makefile config.status: creating include/Makefile config.status: creating src/Makefile config.status: creating src/python/Makefile config.status: creating config.h config.status: executing depfiles commands >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4 ... make -j7 cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run aclocal-1.9 /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing: 52: aclocal-1.9: not found WARNING: `aclocal-1.9' is missing on your system. You should only need it if you modified `acinclude.m4' or `configure.ac'. You might want to install the `Automake' and `Perl' packages. Grab them from any GNU archive site. cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run autoconf cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run automake-1.9 --foreign /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing: 52: automake-1.9: not found WARNING: `automake-1.9' is missing on your system. You should only need it if you modified `Makefile.am', `acinclude.m4' or `configure.ac'. You might want to install the `Automake' and `Perl' packages. Grab them from any GNU archive site. configure.ac:11: warning: The macro `AC_FOREACH' is obsolete. configure.ac:11: You should run autoupdate. ./lib/autoconf/general.m4:191: AC_FOREACH is expanded from... aclocal.m4:727: _AM_SET_OPTIONS is expanded from... aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from... configure.ac:11: the top level configure.ac:14: warning: The macro `AM_CONFIG_HEADER' is obsolete. configure.ac:14: You should run autoupdate. aclocal.m4:402: AM_CONFIG_HEADER is expanded from... configure.ac:14: the top level configure.ac:21: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... acinclude.m4:2989: AC_ENABLE_SHARED is expanded from... acinclude.m4:3018: AC_DISABLE_SHARED is expanded from... configure.ac:21: the top level configure.ac:98: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:98: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:98: the top level configure.ac:107: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:107: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:107: the top level configure.ac:161: warning: The macro `ac_cv_prog_gcc' is obsolete. configure.ac:161: You should run autoupdate. ./lib/autoconf/c.m4:440: ac_cv_prog_gcc is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: The macro `ac_cv_prog_g77' is obsolete. configure.ac:161: You should run autoupdate. ./lib/autoconf/fortran.m4:269: ac_cv_prog_g77 is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_o3, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_faltivec, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_maltivec, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_mabialtivec, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_fno_schedule_insns, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_m_cpu_7450, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_m_tune_970, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_m_cpu_powerpc, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_msse2, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_funroll_all_loops, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_stdgnu99, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_fexcess_precision_fast, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_guessed_cflags, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:255: ACX_CHECK_CC_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:161: warning: AC_CACHE_VAL(ac_guessed_fflags, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:281: ACX_CHECK_F77_FLAGS is expanded from... acinclude.m4:407: ACX_COMPILER_MAXOPT is expanded from... configure.ac:161: the top level configure.ac:186: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:186: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... configure.ac:186: the top level configure.ac:197: warning: AC_CACHE_VAL(acx_float_format, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:164: ACX_FLOAT_FORMAT is expanded from... configure.ac:197: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... acinclude.m4:3028: AC_ENABLE_STATIC is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... acinclude.m4:3067: AC_ENABLE_FAST_INSTALL is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... acinclude.m4:3208: AC_PROG_LD is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1534: AC_ARG_ENABLE is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1694: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3731: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3730: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_static_works, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1739: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3731: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3730: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1548: _LT_AC_LOCK is expanded from... acinclude.m4:2153: AC_LIBTOOL_SYS_HARD_LINK_LOCKS is expanded from... acinclude.m4:3731: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3730: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ./lib/autoconf/lang.m4:199: AC_LANG_CONFTEST is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... acinclude.m4:1368: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6422: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:3731: _LT_AC_LANG_C_CONFIG is expanded from... acinclude.m4:3730: AC_LIBTOOL_LANG_C_CONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:204: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... ./lib/autoconf/general.m4:1553: AC_ARG_WITH is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: back quotes and double quotes must not be escaped in: tag name \"$tagname\" already exists acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ./lib/autoconf/lang.m4:199: AC_LANG_CONFTEST is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... acinclude.m4:1368: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:3812: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:3811: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1694: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3812: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:3811: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_CXX, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1739: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:3812: _LT_AC_LANG_CXX_CONFIG is expanded from... acinclude.m4:3811: AC_LIBTOOL_LANG_CXX_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1694: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4979: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:4978: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_F77, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1739: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:4979: _LT_AC_LANG_F77_CONFIG is expanded from... acinclude.m4:4978: AC_LIBTOOL_LANG_F77_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_pic_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1694: AC_LIBTOOL_COMPILER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5081: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5080: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_CACHE_VAL(lt_prog_compiler_static_works_GCJ, ...): suspicious cache-id, must contain _cv_ to be cached ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... acinclude.m4:1739: AC_LIBTOOL_LINKER_OPTION is expanded from... acinclude.m4:5895: AC_LIBTOOL_PROG_COMPILER_PIC is expanded from... acinclude.m4:5081: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5080: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:204: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ./lib/autoconf/lang.m4:199: AC_LANG_CONFTEST is expanded from... ./lib/autoconf/general.m4:2894: _AC_LINK_IFELSE is expanded from... ./lib/autoconf/general.m4:2911: AC_LINK_IFELSE is expanded from... acinclude.m4:1368: _LT_AC_SYS_LIBPATH_AIX is expanded from... acinclude.m4:6422: AC_LIBTOOL_PROG_LD_SHLIBS is expanded from... acinclude.m4:5081: _LT_AC_LANG_GCJ_CONFIG is expanded from... acinclude.m4:5080: AC_LIBTOOL_LANG_GCJ_CONFIG is expanded from... acinclude.m4:2867: _LT_AC_TAGCONFIG is expanded from... acinclude.m4:1159: AC_LIBTOOL_SETUP is expanded from... acinclude.m4:1139: _AC_PROG_LIBTOOL is expanded from... acinclude.m4:1104: AC_PROG_LIBTOOL is expanded from... configure.ac:204: the top level configure.ac:241: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:241: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:241: the top level configure.ac:266: warning: The macro `AC_TYPE_SIGNAL' is obsolete. configure.ac:266: You should run autoupdate. ./lib/autoconf/types.m4:776: AC_TYPE_SIGNAL is expanded from... configure.ac:266: the top level configure.ac:337: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:337: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:337: the top level configure.ac:341: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:341: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... configure.ac:341: the top level /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --docdir=/usr/share/doc/xdrfile-1.1.4 --htmldir=/usr/share/doc/xdrfile-1.1.4/html --libdir=/usr/lib64 build_alias=x86_64-pc-linux-gnu host_alias=x86_64-pc-linux-gnu CFLAGS=-O2 -pipe -march=native -fdiagnostics-color=always -frecord-gcc-switches LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 F77=x86_64-pc-linux-gnu-gfortran FFLAGS=-O2 -pipe -march=native -fdiagnostics-color=always -frecord-gcc-switches CXXFLAGS=-O2 -pipe -march=native -fdiagnostics-color=always -frecord-gcc-switches --no-create --no-recursion configure: loading site script /usr/share/config.site checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for gawk... gawk checking whether make sets $(MAKE)... yes checking how to create a ustar tar archive... gnutar checking for x86_64-pc-linux-gnu-cc... no checking for x86_64-pc-linux-gnu-icc... no checking for x86_64-pc-linux-gnu-xlc... no checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to enable C11 features... none needed checking for style of include used by make... GNU checking dependency style of x86_64-pc-linux-gnu-gcc... none checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking whether x86_64-pc-linux-gnu-gcc accepts -O3... yes checking whether x86_64-pc-linux-gnu-gcc accepts -msse2... yes checking whether x86_64-pc-linux-gnu-gcc accepts -funroll-all-loops... yes checking whether x86_64-pc-linux-gnu-gcc accepts -std=gnu99... yes checking whether x86_64-pc-linux-gnu-gcc accepts -fexcess-precision=fast... yes checking whether x86_64-pc-linux-gnu-gcc accepts -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking size of long int... 8 checking size of long long int... 8 checking that size_t can hold pointers... yes checking floating-point format... IEEE754 (little-endian byte and word order) checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... pass_all checking for dlfcn.h... yes checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking for x86_64-pc-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of x86_64-pc-linux-gnu-g++... none checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok checking for objdir... .libs checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for sqrt in -lm... yes checking for rpc/rpc.h... no checking for rpc/xdr.h... no checking for xdr_float in -lnsl... no configure: WARNING: Couldn't find XDR headers and/or libraries - using our own checking for working memcmp... yes checking return type of signal handlers... void checking for vprintf... yes checking if malloc debugging is wanted... no checking for strcasecmp... yes checking for strdup... yes checking for bool... no checking for limits.h... yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for inline... inline checking whether byte ordering is bigendian... (cached) no configure: creating ./config.status /bin/sh ./config.status config.status: creating Makefile config.status: creating include/Makefile config.status: creating src/Makefile config.status: creating src/python/Makefile config.status: creating config.h config.status: executing depfiles commands cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run autoheader rm -f stamp-h1 touch config.h.in cd . && /bin/sh ./config.status config.h config.status: creating config.h make all-recursive make[1]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' Making all in include make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' Making all in src make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' Making all in python make[3]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[3]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c -o xdrfile.lo xdrfile.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c -o xdrfile_trr.lo xdrfile_trr.c /bin/sh ../libtool --tag=CC --mode=compile x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c -o xdrfile_xtc.lo xdrfile_xtc.c x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c trr2xtc.c trr2xtc.c:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from trr2xtc.c:38: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from trr2xtc.c:39: ../include/xdrfile_trr.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from ../include/xdrfile_trr.h:40, from trr2xtc.c:39: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from trr2xtc.c:40: ../include/xdrfile_xtc.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c xdrfile_trr.c -o xdrfile_trr.o x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c xdrfile_xtc.c -o xdrfile_xtc.o x86_64-pc-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I. -I.. -I../include -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -c xdrfile.c -o xdrfile.o xdrfile_trr.c:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | xdrfile.c:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from xdrfile_xtc.c:31: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from xdrfile_xtc.c:32: ../include/xdrfile_xtc.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from ../include/xdrfile_xtc.h:41, from xdrfile_xtc.c:32: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from xdrfile_trr.c:41: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from xdrfile_trr.c:42: ../include/xdrfile_trr.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from ../include/xdrfile_trr.h:40, from xdrfile_trr.c:42: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | In file included from xdrfile.c:60: ../include/xdrfile.h:5:2: warning: "/*" within comment [-Wcomment[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wcomment]] 5 | /* -*- mode: c; tab-width: 4; indent-tabs-mode: t; c-basic-offset: 4 -*- | xdrfile.c: In function 'xdrfile_decompress_coord_float.part.0': xdrfile.c:2158:29: warning: 'lsize' may be used uninitialized [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 2158 | i32 = (int32_t) *ip; | ~~~~^~~~~~~~~~~~~~~ xdrfile.c:791:30: note: 'lsize' was declared here 791 | int k, *buf1, *buf2, lsize, flag; | ^~~~~ xdrfile.c:868:13: warning: 'smallidx' may be used uninitialized [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 868 | tmp = smallidx-1; | ~~~~^~~~~~~~~~~~ xdrfile.c: In function 'xdrfile_decompress_coord_double.part.0': xdrfile.c:2158:29: warning: 'lsize' may be used uninitialized [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 2158 | i32 = (int32_t) *ip; | ~~~~^~~~~~~~~~~~~~~ xdrfile.c:1287:30: note: 'lsize' was declared here 1287 | int k, *buf1, *buf2, lsize, flag; | ^~~~~ xdrfile.c:1368:13: warning: 'smallidx' may be used uninitialized [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1368 | tmp = smallidx-1; | ~~~~^~~~~~~~~~~~ xdrfile.c: In function 'xdrfile_write_string': xdrfile.c:2359:12: warning: 'size' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 2359 | if (size > maxsize) | ^ xdrfile.c:2333:22: note: 'size' was declared here 2333 | unsigned int size; | ^~~~ xdrfile.c: In function 'xdrfile_compress_coord_float': xdrfile.c:1155:42: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1155 | abs(thiscoord[2] - prevcoord[2]) < larger) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ xdrfile.c:1154:42: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1154 | abs(thiscoord[1] - prevcoord[1]) < larger && | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ xdrfile.c:1153:42: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1153 | abs(thiscoord[0] - prevcoord[0]) < larger && | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ xdrfile.c: In function 'xdrfile_compress_coord_double': xdrfile.c:1637:42: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1637 | abs(thiscoord[2] - prevcoord[2]) < larger) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ xdrfile.c:1636:42: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1636 | abs(thiscoord[1] - prevcoord[1]) < larger && | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ xdrfile.c:1635:42: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized[https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wmaybe-uninitialized]] 1635 | abs(thiscoord[0] - prevcoord[0]) < larger && | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o libxdrfile.la -rpath /usr/lib64 -version-info 4:0:0 xdrfile.lo xdrfile_trr.lo xdrfile_xtc.lo -lm mkdir .libs x86_64-pc-linux-gnu-ar cru .libs/libxdrfile.a xdrfile.o xdrfile_trr.o xdrfile_xtc.o x86_64-pc-linux-gnu-ranlib .libs/libxdrfile.a creating libxdrfile.la (cd .libs && rm -f libxdrfile.la && ln -s ../libxdrfile.la libxdrfile.la) /bin/sh ../libtool --tag=CC --mode=link x86_64-pc-linux-gnu-gcc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o trr2xtc trr2xtc.o libxdrfile.la -lm x86_64-pc-linux-gnu-gcc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -fexcess-precision=fast -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o trr2xtc trr2xtc.o ./.libs/libxdrfile.a -lm make[3]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make[1]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' >>> Source compiled. >>> Test phase [not enabled]: sci-libs/xdrfile-1.1.4 >>> Install sci-libs/xdrfile-1.1.4 into /var/tmp/portage/sci-libs/xdrfile-1.1.4/image/ make -j7 DESTDIR=/var/tmp/portage/sci-libs/xdrfile-1.1.4/image/ install Making install in include make[1]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' make[2]: Nothing to be done for 'install-exec-am'. test -z "/usr/include/xdrfile" || mkdir -p -- "/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/include/xdrfile" /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c -m 644 'xdrfile.h' '/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/include/xdrfile/xdrfile.h' /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c -m 644 'xdrfile_trr.h' '/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/include/xdrfile/xdrfile_trr.h' /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c -m 644 'xdrfile_xtc.h' '/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/include/xdrfile/xdrfile_xtc.h' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' make[1]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/include' Making install in src make[1]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' Making install in python make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[3]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src/python' make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[3]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' test -z "/usr/lib64" || mkdir -p -- "/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64" make[3]: Nothing to be done for 'install-data-am'. /bin/sh ../libtool --mode=install /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c 'libxdrfile.la' '/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64/libxdrfile.la' /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c .libs/libxdrfile.lai /var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64/libxdrfile.la /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c .libs/libxdrfile.a /var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64/libxdrfile.a chmod 644 /var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64/libxdrfile.a x86_64-pc-linux-gnu-ranlib /var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/lib64/libxdrfile.a libtool: install: warning: remember to run `libtool --finish /usr/lib64' test -z "/usr/bin" || mkdir -p -- "/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/bin" /bin/sh ../libtool --mode=install /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c 'trr2xtc' '/var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/bin/trr2xtc' /usr/lib/portage/python3.10/ebuild-helpers/xattr/install -c trr2xtc /var/tmp/portage/sci-libs/xdrfile-1.1.4/image//usr/bin/trr2xtc make[3]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[1]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/src' make[1]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make[2]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make install-exec-hook make[2]: Nothing to be done for 'install-data-am'. make[3]: Entering directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' libxdrfile is installed under /usr. Make sure to update your PATH and MANPATH to find the programs and unix manual pages, and possibly LD_LIBRARY_PATH or /etc/ld.so.conf if you are using dynamic libraries. Please run "make test" now to verify your installation. If you want links to the executables in /usr/local/bin, you can issue "make links" now. make[3]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make[2]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' make[1]: Leaving directory '/var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4' >>> Completed installing sci-libs/xdrfile-1.1.4 into /var/tmp/portage/sci-libs/xdrfile-1.1.4/image/ * Final size of build directory: 5368 KiB (5.2 MiB) * Final size of installed tree: 552 KiB * QA Notice: Automake "maintainer mode" detected: * * cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run aclocal-1.9 * cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run autoconf * cd . && /bin/sh /var/tmp/portage/sci-libs/xdrfile-1.1.4/work/xdrfile-1.1.4/config/missing --run automake-1.9 --foreign * * If you patch Makefile.am, configure.in, or configure.ac then you * should use autotools.eclass and eautomake or eautoreconf. Exceptions * are limited to system packages for which it is impossible to run * autotools during stage building. See https://wiki.gentoo.org/wiki/Proj * ect:Quality_Assurance/Autotools_failures for more information. * QA Notice: Files built without respecting CFLAGS have been detected * Please include the following list of files in your report: * /usr/bin/trr2xtc removing executable bit: /usr/lib64/libxdrfile.la strip: x86_64-pc-linux-gnu-strip --strip-unneeded -N __gentoo_check_ldflags__ -R .comment -R .GCC.command.line -R .note.gnu.gold-version /usr/lib64/libxdrfile.a /usr/bin/trr2xtc