* Package:    sci-physics/espresso-4.1.3
 * Repository: gentoo
 * Maintainer: sci-physics@gentoo.org
 * USE:        abi_x86_64 amd64 elibc_glibc fftw hdf5 kernel_linux python_single_target_python3_8 userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox


@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@
This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix;
This ebuild was merged at the following commit:
https://github.com/gentoo-mirror/gentoo/commit/a65a7d646ee444a280c1f86183de777011bc7926  (Sat May 29 20:20:14 UTC 2021)
@@@@@ END @@@@@



##################
# emerge --info: #
##################
Portage 3.0.19 (python 3.9.5-final-0, default/linux/amd64/17.1, gcc-11.1.0, glibc-2.33, 5.4.0-1029-aws x86_64)
=================================================================
System uname: Linux-5.4.0-1029-aws-x86_64-Intel-R-_Xeon-R-_Platinum_8175M_CPU_@_2.50GHz-with-glibc2.33
KiB Mem:    64359964 total,  28886016 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sat, 29 May 2021 20:20:13 +0000
sh bash 5.1_p8
ld GNU ld (Gentoo 2.36.1 p3) 2.36.1
app-shells/bash:          5.1_p8::gentoo
dev-lang/perl:            5.34.0::gentoo
dev-lang/python:          3.7.10_p4::gentoo, 3.8.10_p1::gentoo, 3.9.5_p1::gentoo, 3.10.0_beta1::gentoo
dev-lang/rust:            1.52.1::gentoo
dev-util/cmake:           3.20.3::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.7-r2::gentoo
sys-apps/openrc:          0.43.3::gentoo
sys-apps/sandbox:         2.24::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r5::gentoo
sys-devel/automake:       1.16.3-r1::gentoo
sys-devel/binutils:       2.36.1-r1::gentoo
sys-devel/gcc:            11.1.0::gentoo
sys-devel/gcc-config:     2.4::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.3::gentoo
sys-kernel/linux-headers: 5.12::gentoo (virtual/os-headers)
sys-libs/glibc:           2.33::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts: 
    sync-rsync-verify-jobs: 1

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* GPL-3"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color"
DISTDIR="/var/tmp/portage/sci-physics/espresso-4.1.3/distdir"
EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -k -b"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="C.UTF8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0"
MAKEOPTS="-j16"
PKGDIR="/root/.packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli crypt dri elogind fftw fortran gdbm hdf5 iconv ipv6 jumbo-build libglvnd libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" PYTHON_SINGLE_TARGET="python3_8" USERLAND="GNU"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RUSTFLAGS





##############################
# emerge history (qlop -mv): #
##############################
2021-05-29T23:25:49 >>> dev-util/boost-build-1.76.0-r2
2021-05-29T23:25:52 >>> virtual/fortran-0
2021-05-29T23:25:50 >>> x11-misc/util-macros-1.19.3
2021-05-29T23:25:53 >>> media-fonts/font-util-1.3.2-r1
2021-05-29T23:25:55 >>> sys-apps/pciutils-3.7.0
2021-05-29T23:25:56 >>> dev-python/cython-0.29.23
2021-05-29T23:25:59 >>> sci-libs/lapack-3.9.0-r1
2021-05-29T23:25:57 >>> sci-libs/fftw-3.3.9
2021-05-29T23:26:03 >>> x11-libs/libpciaccess-0.16
2021-05-29T23:26:13 >>> virtual/cblas-3.8
2021-05-29T23:26:14 >>> virtual/lapack-3.8
2021-05-29T23:26:16 >>> sys-apps/hwloc-2.3.0
2021-05-29T23:26:23 >>> dev-python/numpy-1.20.3-r1
2021-05-29T23:26:25 >>> sys-cluster/openmpi-4.0.5
2021-05-29T23:31:31 >>> virtual/mpi-2.0-r5
2021-05-29T23:31:39 >>> sci-libs/hdf5-1.10.5-r1
2021-05-29T23:31:38 >>> dev-libs/boost-1.76.0-r1




#######################################
# installed packages (qlist -ICvUSS): #
#######################################
acct-group/audio-0-r1:0
acct-group/cdrom-0-r1:0
acct-group/dialout-0-r1:0
acct-group/disk-0-r1:0
acct-group/input-0-r1:0
acct-group/kmem-0-r1:0
acct-group/kvm-0-r1:0
acct-group/lp-0-r1:0
acct-group/man-0-r1:0
acct-group/messagebus-0-r1:0
acct-group/polkitd-0-r1:0
acct-group/portage-0:0
acct-group/render-0-r1:0
acct-group/sshd-0-r1:0
acct-group/tape-0-r1:0
acct-group/tty-0-r1:0
acct-group/video-0-r1:0
acct-user/man-1-r1:0
acct-user/messagebus-0-r1:0
acct-user/polkitd-0-r1:0
acct-user/portage-0:0
acct-user/sshd-0-r1:0
app-admin/eselect-1.4.17:0 -doc -emacs -vim-syntax
app-admin/perl-cleaner-2.30:0
app-arch/bzip2-1.0.8-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 split-usr -static -static-libs
app-arch/gzip-1.10:0 -pic -static
app-arch/libarchive-3.5.1:0/13 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -blake2 bzip2 e2fsprogs -expat iconv -lz4 lzma -lzo -nettle -static-libs threads xattr zlib -zstd
app-arch/tar-1.34:0 acl -minimal nls -selinux xattr
app-arch/unzip-6.0_p26:0 bzip2 -natspec unicode
app-arch/xz-utils-5.2.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 extra-filters nls split-usr -static-libs threads
app-arch/zstd-1.5.0:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -lz4 -static-libs threads
app-crypt/gnupg-2.2.27:0 bzip2 -doc -ldap nls readline -scd-shared-access -selinux smartcard ssl -tofu -tools -usb -user-socket -wks-server
app-crypt/gpgme-1.15.1:1/11 -common-lisp cxx -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -qt5 -static-libs
app-crypt/libb2-0.98.1-r3:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -native-cflags openmp -static-libs
app-crypt/openpgp-keys-gentoo-release-20200704:0 -test
app-crypt/pinentry-1.1.1-r1:0 -caps -efl -emacs -gnome-keyring -gtk ncurses -qt5
app-crypt/rhash-1.4.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug nls ssl -static-libs
app-editors/nano-5.7:0 -debug -justify -magic -minimal ncurses nls spell split-usr -static unicode
app-eselect/eselect-iptables-20200508:0
app-eselect/eselect-lib-bin-symlink-0.1.1-r1:0
app-eselect/eselect-pinentry-0.7.2:0
app-eselect/eselect-python-20200719:0
app-eselect/eselect-rust-20200419:0
app-i18n/man-pages-it-5.06:0
app-i18n/man-pages-ja-20180315:0
app-i18n/man-pages-l10n-4.2.0-r1:0 l10n_de l10n_fr l10n_nl l10n_pl l10n_pt-BR l10n_ro
app-i18n/man-pages-ru-5.03.2390.2390.20191017:0
app-i18n/man-pages-zh_CN-1.6.3.2:0
app-misc/c_rehash-1.7-r1:0
app-misc/ca-certificates-20210119.3.66:0 -cacert
app-misc/editor-wrapper-4-r1:0
app-misc/mime-types-9:0
app-misc/pax-utils-1.3.1:0 -caps -debug -python -python_single_target_python3_7 python_single_target_python3_8 -python_single_target_python3_9 seccomp
app-misc/tmux-3.2-r1:0 -debug -selinux -utempter -vim-syntax
app-portage/eix-0.34.12:0 -debug -doc nls -sqlite
app-portage/elt-patches-20201205:0
app-portage/gemato-16.2:0 gpg python_targets_pypy3 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test -tools
app-portage/gentoolkit-0.5.1:0 python_targets_pypy3 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
app-portage/portage-utils-0.91:0 nls openmp qmanifest qtegrity -static
app-shells/bash-5.1_p8:0 -afs -bashlogger -examples -mem-scramble net nls -plugins readline
app-shells/push-3.4:0
app-shells/quoter-4.2:0
app-text/ansifilter-2.18:0 -qt5
app-text/build-docbook-catalog-1.21:0
app-text/docbook-xml-dtd-4.5-r2:4.5
app-text/docbook-xml-dtd-4.4-r3:4.4
app-text/docbook-xml-dtd-4.2-r3:4.2
app-text/docbook-xml-dtd-4.1.2-r7:4.1.2
app-text/docbook-xsl-stylesheets-1.79.1-r2:0 -ruby
app-text/manpager-1:0
app-text/opensp-1.5.2-r6:0 -doc nls -static-libs -test
app-text/po4a-0.63:0 -test
app-text/sgml-common-0.6.3-r7:0
app-text/xmlto-0.0.28-r6:0 -latex -text
dev-db/sqlite-3.35.5:3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -doc -icu readline -secure-delete -static-libs -tcl -test -tools
dev-lang/perl-5.34.0:0/5.34 berkdb -debug -doc gdbm -ithreads -minimal
dev-lang/python-3.10.0_beta1:3.10 -bluetooth -build -examples gdbm -hardened ipv6 ncurses readline sqlite ssl -test -tk -verify-sig -wininst xml
dev-lang/python-3.9.5_p1:3.9 -bluetooth -build -examples gdbm -hardened ipv6 ncurses readline sqlite ssl -test -tk -verify-sig -wininst xml
dev-lang/python-3.8.10_p1:3.8 -bluetooth -build -examples gdbm -hardened ipv6 ncurses readline sqlite ssl -test -tk -verify-sig -wininst xml
dev-lang/python-3.7.10_p4:3.7/3.7m -bluetooth -build -examples gdbm -hardened ipv6 ncurses readline sqlite ssl -test -tk -verify-sig -wininst xml
dev-lang/python-exec-2.4.6-r4:2 native-symlinks python_targets_pypy3 python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
dev-lang/python-exec-conf-2.4.6:2 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
dev-lang/rust-1.52.1:stable/1.52 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -clippy cpu_flags_x86_sse2 -debug -doc -llvm_targets_AArch64 -llvm_targets_AMDGPU -llvm_targets_ARM -llvm_targets_AVR -llvm_targets_BPF -llvm_targets_Hexagon -llvm_targets_Lanai -llvm_targets_Mips -llvm_targets_MSP430 -llvm_targets_NVPTX -llvm_targets_PowerPC -llvm_targets_RISCV -llvm_targets_Sparc -llvm_targets_SystemZ -llvm_targets_WebAssembly llvm_targets_X86 -llvm_targets_XCore -miri -nightly -parallel-compiler -rls -rustfmt -system-bootstrap -system-llvm -test -verify-sig -wasm
dev-lang/spidermonkey-78.10.1:78 -clang -cpu_flags_arm_neon -debug jit -lto -test
dev-lang/tcl-8.6.11:0/8.6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug threads
dev-libs/boost-1.76.0-r1:0/1.76.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -context -debug -doc -icu -lzma mpi nls -numpy -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -static-libs threads -tools zlib -zstd
dev-libs/elfutils-0.185:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -lzma nls -static-libs -test -threads utils -valgrind -zstd
dev-libs/expat-2.4.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -examples split-usr -static-libs unicode
dev-libs/glib-2.68.2:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dbus -debug elf -fam -gtk-doc mime -selinux -static-libs -sysprof -systemtap -test -utils xattr
dev-libs/gmp-6.2.1-r1:0/10.4 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm cxx -doc -pic -static-libs
dev-libs/gobject-introspection-1.68.0:0 -doctool -gtk-doc -python_single_target_python3_7 python_single_target_python3_8 -python_single_target_python3_9 -test
dev-libs/gobject-introspection-common-1.68.0:0
dev-libs/icu-69.1:0/69.1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -doc -examples -static-libs
dev-libs/isl-0.24:0/23 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/jsoncpp-1.9.4:0/24 -doc -test
dev-libs/libassuan-2.5.5:0
dev-libs/libevent-2.1.12:0/2.1-7 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 clock-gettime -debug -malloc-replacement ssl -static-libs -test threads -verbose-debug
dev-libs/libffi-3.3-r2:0/7 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -pax_kernel -static-libs -test
dev-libs/libgcrypt-1.9.3:0/20 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_neon -cpu_flags_x86_aes -cpu_flags_x86_avx -cpu_flags_x86_avx2 -cpu_flags_x86_padlock -cpu_flags_x86_sha -cpu_flags_x86_sse4_1 -doc -o-flag-munging -static-libs
dev-libs/libgpg-error-1.42:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -common-lisp nls -static-libs
dev-libs/libksba-1.5.1:0 -static-libs
dev-libs/libltdl-2.4.6:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/libpcre-8.44:3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 cxx jit -libedit pcre16 pcre32 readline recursion-limit split-usr -static-libs unicode zlib
dev-libs/libpcre2-10.37-r1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 jit -libedit pcre16 pcre32 readline recursion-limit split-usr -static-libs unicode zlib
dev-libs/libpipeline-1.5.3:0 -static-libs -test
dev-libs/libtasn1-4.17.0:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -static-libs -test -valgrind
dev-libs/libunistring-0.9.10-r1:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -doc -static-libs
dev-libs/libuv-1.41.0:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
dev-libs/libxml2-2.9.12-r2:2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -examples -icu ipv6 -lzma python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 readline -static-libs -test -verify-sig
dev-libs/libxslt-1.1.34-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 crypt -debug -examples -static-libs -verify-sig
dev-libs/mpc-1.2.1:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/mpfr-4.1.0:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
dev-libs/nettle-3.7.2:0/8-6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -cpu_flags_arm_neon -cpu_flags_x86_aes -cpu_flags_x86_sha -doc gmp -static-libs -test
dev-libs/npth-1.6-r1:0
dev-libs/nspr-4.31:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug
dev-libs/openssl-1.1.1k:0/1.1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 asm -bindist cpu_flags_x86_sse2 -rfc3779 -sctp -sslv3 -static-libs -test -tls-heartbeat -vanilla zlib
dev-libs/popt-1.18:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static-libs
dev-perl/Authen-SASL-2.160.0-r2:0 -kerberos -test
dev-perl/Digest-HMAC-1.40.0:0
dev-perl/Encode-EUCJPASCII-0.30.0-r1:0 -test
dev-perl/Encode-HanExtra-0.230.0-r3:0
dev-perl/Encode-Locale-1.50.0:0 -test
dev-perl/Error-0.170.290:0 -test
dev-perl/File-Listing-6.70.0:0 -test
dev-perl/HTML-Parser-3.720.0:0 -test
dev-perl/HTML-Tagset-3.200.0-r1:0
dev-perl/HTTP-Cookies-6.40.0:0 -test
dev-perl/HTTP-Date-6.20.0-r1:0
dev-perl/HTTP-Message-6.290.0:0 -test
dev-perl/HTTP-Negotiate-6.10.0-r1:0
dev-perl/IO-HTML-1.1.0:0 -test
dev-perl/IO-Socket-INET6-2.720.0-r1:0
dev-perl/IO-Socket-SSL-2.66.0:0 -examples -idn
dev-perl/libwww-perl-6.530.0:0 ssl -test
dev-perl/Locale-gettext-1.70.0:0
dev-perl/LWP-MediaTypes-6.20.0-r1:0
dev-perl/LWP-Protocol-https-6.70.0:0 -test
dev-perl/MailTools-2.190.0:0 -examples -test
dev-perl/MIME-Charset-1.12.2:0 l10n_ja l10n_zh
dev-perl/Module-Build-0.422.400:0 -test
dev-perl/Mozilla-CA-20999999:0
dev-perl/Net-HTTP-6.210.0:0 -minimal -test
dev-perl/Net-SSLeay-1.880.0-r1:0 -examples -examples -minimal -test
dev-perl/Pod-Parser-1.630.0-r1:0 -test
dev-perl/SGMLSpm-1.1-r1:0
dev-perl/Socket6-0.280.0:0
dev-perl/Sub-Name-0.210.0:0 -suggested -test
dev-perl/TermReadKey-2.370.0:0 -examples
dev-perl/Text-CharWidth-0.40.0-r1:0
dev-perl/Text-WrapI18N-0.60.0-r1:0
dev-perl/TimeDate-2.330.0:0
dev-perl/Try-Tiny-0.300.0:0 -minimal -test
dev-perl/Unicode-LineBreak-2019.1.0:0
dev-perl/URI-1.730.0:0 -test
dev-perl/WWW-RobotRules-6.20.0-r1:0
dev-perl/XML-Parser-2.460.0:0
dev-perl/YAML-Tiny-1.730.0:0 -minimal -test
dev-python/certifi-10001-r1:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/chardet-4.0.0:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/cython-0.29.23:0 -doc -emacs python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/idna-3.1:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
dev-python/jinja-3.0.1:0 -doc -examples python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/markupsafe-2.0.1:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/numpy-1.20.3-r1:0 -doc lapack -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/pypy3-7.3.4_p1:0/pypy37-pp73 bzip2 gdbm jit ncurses -sqlite -test -tk
dev-python/pypy3-exe-bin-7.3.4:7.3.4
dev-python/PySocks-1.7.1-r1:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
dev-python/requests-2.25.1-r2:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -socks5 -test
dev-python/setuptools-57.0.0:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/setuptools_scm-6.0.1-r1:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-python/toml-0.10.2:0 python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test -test
dev-python/urllib3-1.26.5:0 -brotli python_targets_pypy3 -python_targets_python3_10 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-util/boost-build-1.76.0-r2:0 -examples
dev-util/cmake-3.20.3:0 -doc -emacs ncurses -qt5 -test -test
dev-util/desktop-file-utils-0.26-r1:0 -emacs
dev-util/glib-utils-2.68.2:0 -python_single_target_python3_7 python_single_target_python3_8 -python_single_target_python3_9
dev-util/gperf-3.1:0
dev-util/gtk-doc-am-1.33.2:0
dev-util/intltool-0.51.0-r2:0
dev-util/itstool-2.0.6-r1:0 -python_single_target_python3_7 python_single_target_python3_8 -python_single_target_python3_9
dev-util/meson-0.57.2:0 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -test
dev-util/meson-format-array-0:0 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9
dev-util/ninja-1.10.2-r1:0 -doc -emacs -test -vim-syntax
dev-util/pkgconfig-0.29.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -hardened -internal-glib
dev-util/re2c-2.1.1-r1:0 -debug
dev-vcs/git-2.31.1:0 blksha1 -cgi curl -cvs -doc -emacs -gnome-keyring gpg -highlight iconv -mediawiki -mediawiki-experimental nls pcre -perforce perl -ppcsha1 -python_single_target_python3_7 python_single_target_python3_8 -python_single_target_python3_9 -subversion -test threads -tk webdav -xinetd
media-fonts/font-util-1.3.2-r1:0
net-dns/libidn2-2.3.1:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs -verify-sig
net-firewall/iptables-1.8.7:0/1.8.3 -conntrack ipv6 -netlink -nftables -pcap split-usr -static-libs
net-libs/gnutls-3.7.2:0/30 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 cxx -dane -doc -examples -guile idn nls openssl -pkcs11 seccomp -sslv2 -sslv3 -static-libs -test -test-full tls-heartbeat -tools -valgrind
net-libs/libmnl-1.0.4:0/0.2.0 -examples split-usr -static-libs
net-libs/libnsl-1.3.0-r1:0/2 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
net-libs/libtirpc-1.3.2:0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 ipv6 -kerberos split-usr -static-libs
net-libs/nghttp2-1.43.0:0/1.14 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cxx -debug -hpack-tools -jemalloc -static-libs -test threads -utils -xml
net-misc/curl-7.77.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -adns -alt-svc -brotli -curl_ssl_gnutls -curl_ssl_mbedtls -curl_ssl_nss curl_ssl_openssl -curl_ssl_winssl ftp -gnutls -gopher -hsts http2 -idn imap ipv6 -kerberos -ldap -mbedtls -metalink -nghttp3 -nss openssl pop3 progress-meter -quiche -rtmp -samba smtp -ssh ssl -sslv3 -static-libs -telnet -test tftp -threads -winssl -zstd
net-misc/iputils-20210202:0 arping -caps -clockdiff -doc filecaps -gcrypt -idn ipv6 -nettle nls -rarpd -rdisc ssl -static -tftpd -tracepath -traceroute6
net-misc/netifrc-0.7.3:0
net-misc/openssh-8.6_p1-r1:0 -abi_mips_n32 -audit -bindist -debug -hpn -kerberos -ldns -libedit -livecd pam pie scp -sctp -security-key -selinux ssl -static -test -X -X509 -xmss
net-misc/rsync-3.2.3-r4:0 acl -examples iconv ipv6 -lz4 ssl -stunnel -system-zlib xattr -xxhash -zstd
net-misc/wget-1.21.1:0 -cookie_check -debug -gnutls -idn ipv6 -metalink nls -ntlm pcre ssl -static -test -uuid zlib
perl-core/File-Temp-0.231.100:0
sci-libs/fftw-3.3.9:3.0/3 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cpu_flags_arm_neon -cpu_flags_ppc_altivec -cpu_flags_x86_avx -cpu_flags_x86_avx2 -cpu_flags_x86_fma3 -cpu_flags_x86_fma4 cpu_flags_x86_sse cpu_flags_x86_sse2 -doc fortran -mpi openmp -test threads -zbus
sci-libs/hdf5-1.10.5-r1:0/1.10.5 -cxx -debug -examples fortran hl mpi -szip -threads -unsupported zlib
sci-libs/lapack-3.9.0-r1:0 -deprecated -doc -eselect-ldso -lapacke -test
sys-apps/acl-2.3.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls split-usr -static-libs
sys-apps/attr-2.5.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug nls split-usr -static-libs
sys-apps/baselayout-2.7-r2:0 -build split-usr
sys-apps/busybox-1.33.1:0 -debug ipv6 -livecd -make-symlinks -math -mdev -pam -savedconfig -selinux -sep-usr static -syslog -systemd
sys-apps/coreutils-8.32-r1:0 acl -caps -gmp -hostname -kill -multicall nls -selinux split-usr -static -test -vanilla xattr
sys-apps/dbus-1.12.20-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -doc elogind -selinux -static-libs -systemd -test -test -user-session -X
sys-apps/debianutils-4.11.2:0 installkernel -static
sys-apps/diffutils-3.7-r1:0 nls -static
sys-apps/file-5.40-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 bzip2 -lzma -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -seccomp -static-libs zlib
sys-apps/findutils-4.8.0:0 nls -selinux -static -test
sys-apps/gawk-5.1.0:0 -mpfr nls readline
sys-apps/gentoo-functions-0.14:0
sys-apps/grep-3.6:0 nls pcre -static
sys-apps/groff-1.22.4:0 -examples -uchardet -X
sys-apps/help2man-1.48.3:0 nls
sys-apps/hwids-20201207:0 net pci udev usb
sys-apps/hwloc-2.3.0:0/15 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cairo cpuid -cuda -debug -gl -libudev -netloc -nvml pci -static-libs -svg -X -xml
sys-apps/install-xattr-0.8:0
sys-apps/iproute2-5.10.0-r1:0 -atm berkdb -caps -elf iptables ipv6 -libbsd -minimal -selinux
sys-apps/kbd-2.4.0:0 nls pam -test
sys-apps/kmod-29:0 -debug -doc lzma -pkcs7 -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -static-libs tools zlib -zstd
sys-apps/less-586:0 pcre unicode
sys-apps/man-db-2.9.4:0 berkdb gdbm manpager nls seccomp -selinux -static-libs zlib
sys-apps/man-pages-5.11:0 l10n_de l10n_fr l10n_it l10n_ja l10n_nl l10n_pl l10n_pt-BR l10n_ro l10n_ru l10n_zh-CN
sys-apps/man-pages-posix-2017a:0
sys-apps/net-tools-2.10:0 arp hostname ipv6 -nis nls -plipconfig -selinux -slattach -static
sys-apps/openrc-0.43.3:0 -audit -bash -debug ncurses netifrc -newnet pam -prefix -selinux -sysv-utils unicode
sys-apps/pciutils-3.7.0:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -dns kmod -static-libs udev zlib
sys-apps/portage-3.0.19:0 -apidoc -build -doc -gentoo-dev ipc native-extensions python_targets_pypy3 python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 rsync-verify -selinux -test xattr
sys-apps/sandbox-2.24:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 abi_x86_32 abi_x86_64 -abi_x86_x32
sys-apps/sed-4.8:0 acl nls -selinux -static
sys-apps/shadow-4.8.1-r3:0 acl -audit -bcrypt -cracklib nls pam -selinux -skey split-usr su xattr
sys-apps/systemd-tmpfiles-246:0 -selinux -test
sys-apps/sysvinit-2.99:0 -ibm -selinux -static
sys-apps/texinfo-6.7:0 nls standalone -static
sys-apps/util-linux-2.36.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit -build -caps cramfs -cryptsetup -fdformat -hardlink -kill logger -magic ncurses nls pam -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 readline -selinux -slang split-usr -static-libs -su suid -systemd -test -tty-helpers -udev unicode
sys-apps/which-2.21:0
sys-auth/elogind-246.10:0 acl -audit -debug -doc pam policykit -selinux
sys-auth/pambase-20210201.1:0 -caps -debug elogind -gnome-keyring -homed -minimal -mktemp nullok -pam_krb5 -pam_ssh passwdqc -pwhistory -pwquality -securetty -selinux sha512 -systemd
sys-auth/passwdqc-2.0.2:0
sys-auth/polkit-0.118:0 elogind -examples -gtk introspection -jit -kde nls pam -selinux -systemd -test
sys-cluster/openmpi-4.0.5:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cma -cuda cxx fortran -heterogeneous ipv6 -java -java -openmpi_fabrics_knem -openmpi_fabrics_ofed -openmpi_fabrics_psm -openmpi_ofed_features_control-hdr-padding -openmpi_ofed_features_dynamic-sl -openmpi_ofed_features_rdmacm -openmpi_ofed_features_udcm -openmpi_rm_pbs -openmpi_rm_slurm -romio
sys-devel/autoconf-2.69-r5:2.69 -emacs
sys-devel/autoconf-2.13-r1:2.1
sys-devel/autoconf-archive-2021.02.19:0
sys-devel/autoconf-wrapper-15:0
sys-devel/automake-1.16.3-r1:1.16 -test
sys-devel/automake-wrapper-11:0
sys-devel/binutils-2.36.1-r1:2.36 -cet -default-gold -doc gold -multitarget nls plugins -static-libs -test -vanilla
sys-devel/binutils-config-5.4:0 native-symlinks
sys-devel/bison-3.7.6:0 -examples nls -static -test
sys-devel/flex-2.6.4-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 nls -static -test
sys-devel/gcc-11.1.0:11 -ada -custom-cflags cxx -d -debug -doc -fixed-point fortran -go graphite -hardened -jit -libssp lto multilib nls nptl -objc -objc++ -objc-gc openmp pch -pgo pie sanitize ssp -systemtap -test -valgrind -vanilla -vtv -zstd
sys-devel/gcc-config-2.4:0 cc-wrappers native-symlinks
sys-devel/gettext-0.21:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl -cvs cxx -doc -emacs -git -java -java ncurses nls openmp -static-libs
sys-devel/gnuconfig-20210107:0
sys-devel/libtool-2.4.6-r6:2 -vanilla
sys-devel/llvm-12.0.0:12 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -debug -doc -doc -exegesis -gold -libedit libffi -llvm_targets_AArch64 llvm_targets_AMDGPU -llvm_targets_ARC -llvm_targets_ARM -llvm_targets_AVR llvm_targets_BPF -llvm_targets_CSKY -llvm_targets_Hexagon -llvm_targets_Lanai -llvm_targets_Mips -llvm_targets_MSP430 llvm_targets_NVPTX -llvm_targets_PowerPC -llvm_targets_RISCV -llvm_targets_Sparc -llvm_targets_SystemZ -llvm_targets_VE -llvm_targets_WebAssembly llvm_targets_X86 -llvm_targets_XCore ncurses -test -xar -xml -z3
sys-devel/llvm-common-12.0.0:0
sys-devel/m4-1.4.18-r2:0 -examples
sys-devel/make-4.3:0 -guile nls -static
sys-devel/patch-2.7.6-r4:0 -static -test xattr
sys-fs/e2fsprogs-1.46.2:0 -cron -fuse -lto nls split-usr -static-libs threads
sys-fs/udev-248:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 acl kmod -selinux split-usr -static-libs
sys-fs/udev-init-scripts-34:0
sys-kernel/installkernel-gentoo-3:0
sys-kernel/linux-headers-5.12:0 -headers-only
sys-libs/db-6.0.35-r4:6.0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -cxx -doc -doc -examples -java -java -tcl -test -test
sys-libs/e2fsprogs-libs-1.46.2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 split-usr -static-libs
sys-libs/gdbm-1.19:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 berkdb nls readline -static-libs
sys-libs/glibc-2.33:2.2 -audit -caps -cet -compile-locales crypt -custom-cflags -doc -gd -headers-only multiarch multilib -multilib-bootstrap -nscd -profile -selinux ssp static-libs -static-pie -suid -systemtap -test -vanilla
sys-libs/libcap-2.50:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 pam split-usr -static-libs
sys-libs/libseccomp-2.5.1-r1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -python python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 -static-libs
sys-libs/ncurses-6.2_p20210123:0/6 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -ada cxx -debug -doc -gpm -minimal -profile split-usr -static-libs -test -threads tinfo -trace unicode
sys-libs/pam-1.5.1:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -audit berkdb -debug filecaps -nis -selinux split-usr
sys-libs/readline-8.1_p1:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 split-usr -static-libs unicode -utils
sys-libs/timezone-data-2021a:0 -leaps-timezone nls -zic-slim
sys-libs/zlib-1.2.11-r4:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 minizip split-usr -static-libs
sys-process/procps-3.3.17:0/8 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 elogind kill -modern-top ncurses nls -selinux split-usr -static-libs -systemd -test unicode
sys-process/psmisc-23.4-r1:0 ipv6 nls -selinux -X
virtual/acl-0-r2:0 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 -static-libs
virtual/awk-1:0
virtual/cblas-3.8:0 -eselect-ldso
virtual/dev-manager-0-r2:0
virtual/editor-0-r3:0
virtual/fortran-0:0 openmp
virtual/lapack-3.8:0 -eselect-ldso
virtual/libc-1-r1:0
virtual/libcrypt-1-r1:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32 static-libs
virtual/libelf-3:0/1 -abi_mips_n32 -abi_mips_n64 -abi_mips_o32 -abi_s390_32 -abi_s390_64 -abi_x86_32 abi_x86_64 -abi_x86_x32
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#######################
# build.log           #
####################### * Using python3.8 to build
>>> Unpacking source...
>>> Unpacking espresso-4.1.3.tar.gz to /var/tmp/portage/sci-physics/espresso-4.1.3/work
>>> Source unpacked in /var/tmp/portage/sci-physics/espresso-4.1.3/work
>>> Preparing source in /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso ...
 * Working in BUILD_DIR: "/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build"
 * Hardcoded definition(s) removed in libs/h5xx/example/CMakeLists.txt:
 *  set(CMAKE_BUILD_TYPE "Release")
 * Hardcoded definition(s) removed in CMakeLists.txt:
 *      set(CMAKE_BUILD_TYPE "Release" CACHE STRING "Choose the type of build, op
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso ...
 * Working in BUILD_DIR: "/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build"
cmake -C /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DWITH_CUDA=no -DPYTHON_EXECUTABLE=/usr/bin/python3.8 -DWITH_TESTS=no -DINSTALL_PYPRESSO=OFF -DCMAKE_DISABLE_FIND_PACKAGE_FFTW3=no -DWITH_HDF5=yes -DCMAKE_DISABLE_FIND_PACKAGE_HDF5=no -DCMAKE_SKIP_RPATH=YES -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso
loading initial cache file /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/gentoo_common_config.cmake
-- CMake version: 3.20.3
-- The C compiler identification is GNU 11.1.0
-- The CXX compiler identification is GNU 11.1.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Config file: /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config/myconfig-default.hpp
-- Performing Test result__PRETTY_FUNCTION__
-- Performing Test result__PRETTY_FUNCTION__ - Success
-- Found PythonInterp: /usr/bin/python3.8 (found suitable version "3.8.10", minimum required is "3.3") 
-- Found Cython: /usr/bin/cython (found suitable version "0.29.23", minimum required is "0.23") 
-- Found PythonHeaders: /usr/include/python3.8  
-- Found NumPy: /usr/lib/python3.8/site-packages/numpy/core/include (found version "1.20.3") 
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libmpi.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found suitable version "1.10.5", minimum required is "1.8") found components: C 
-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "0.29.2") 
-- Could NOT find GSL (missing: GSL_INCLUDE_DIR GSL_LIBRARY) (found version "")
-- Found MPI_C: /usr/lib64/libmpi.so (found suitable version "3.1", minimum required is "3.0") 
-- Found MPI_CXX: /usr/lib64/libmpi_cxx.so (found suitable version "3.1", minimum required is "3.0") 
-- Found MPI: TRUE (found suitable version "3.1", minimum required is "3.0")  
-- Found Boost: /usr/lib64/cmake/Boost-1.76.0/BoostConfig.cmake (found suitable version "1.76.0", minimum required is "1.55.0") found components: mpi serialization filesystem system 
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) 
-- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE SPHINX_API_DOC_EXE) (Required is at least version "1.6.6")
-- Found Git: /usr/bin/git (found version "2.31.1") 
-- The following features have been enabled:

 * HDF5 (required version >= 1.8), parallel

-- The following OPTIONAL packages have been found:

 * FFTW3
 * HDF5 (required version >= 1.8), parallel
 * PkgConfig
 * Git

-- The following REQUIRED packages have been found:

 * PythonInterp (required version >= 3.3)
 * Cython (required version >= 0.23)
 * PythonHeaders
 * NumPy
 * MPI
 * boost_mpi (required version == 1.76.0)
 * boost_serialization (required version == 1.76.0)
 * boost_filesystem (required version == 1.76.0)
 * boost_headers (required version == 1.76.0)
 * boost_system (required version == 1.76.0)
 * Boost (required version >= 1.55.0)

-- The following OPTIONAL packages have not been found:

 * GSL
 * Doxygen
 * Sphinx (required version >= 1.6.6)

-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color
C++             -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic
Linker flags:
Executable      -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Module          -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Shared          -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0

-- Configuring done
-- Generating done
-- Build files have been written to: /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso ...
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/usr/bin/cmake -E cmake_progress_start /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/CMakeFiles /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build//CMakeFiles/progress.marks
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config/CMakeFiles/version.dir/DependInfo.cmake
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/object_in_fluid && /usr/bin/cmake -E copy /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/python/object_in_fluid/__init__.py /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/object_in_fluid//__init__.py
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config && /usr/bin/python3.8 /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config/gen_featureconfig.py /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config/features.def /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config/config-features.hpp /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config/config-features.cpp
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fatal: not a git repository (or any of the parent directories): .git
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/object_in_fluid && /usr/bin/cmake -E copy /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/python/object_in_fluid/oif_utils.py /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/object_in_fluid//oif_utils.py
fatal: not a git repository (or any of the parent directories): .git
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config && /usr/bin/python3.8 /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config/check_myconfig.py /usr/bin/x86_64-pc-linux-gnu-g++ /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config/features.def /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config/myconfig-final.hpp cmake_config.hpp
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config && /usr/bin/x86_64-pc-linux-gnu-g++ -DEspressoConfig_EXPORTS -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -std=c++14 -MD -MT src/config/CMakeFiles/EspressoConfig.dir/config-features.cpp.o -MF CMakeFiles/EspressoConfig.dir/config-features.cpp.o.d -o CMakeFiles/EspressoConfig.dir/config-features.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config/config-features.cpp
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/usr/bin/x86_64-pc-linux-gnu-g++ -fPIC -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -shared -Wl,-soname,EspressoConfig.so -o EspressoConfig.so CMakeFiles/EspressoConfig.dir/config-features.cpp.o 
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/espressomd && /usr/bin/x86_64-pc-linux-gnu-g++  -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -std=c++14 -MD -MT src/python/espressomd/CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -MF CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o.d -o CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/espressomd/gen_pxiconfig.cpp
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/python/espressomd && /usr/bin/cmake -E cmake_link_script CMakeFiles/gen_pxiconfig.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-g++ -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 CMakeFiles/gen_pxiconfig.dir/gen_pxiconfig.cpp.o -o gen_pxiconfig  ../../config/EspressoConfig.so 
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[  1%] Linking CXX shared library pdbparser.so
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/pdbparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbparser.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-g++ -fPIC -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -shared -Wl,-soname,pdbparser.so -o pdbparser.so CMakeFiles/pdbparser.dir/src/PdbParser.cpp.o 
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cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core/CMakeFiles/EspressoCore.dir/DependInfo.cmake
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[  2%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators.cpp.o
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[  2%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/accumulators.cpp.o -MF CMakeFiles/EspressoCore.dir/accumulators.cpp.o.d -o CMakeFiles/EspressoCore.dir/accumulators.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/accumulators.cpp
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/cells.cpp.o -MF CMakeFiles/EspressoCore.dir/cells.cpp.o.d -o CMakeFiles/EspressoCore.dir/cells.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/cells.cpp
[  3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/communication.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/collision.cpp.o -MF CMakeFiles/EspressoCore.dir/collision.cpp.o.d -o CMakeFiles/EspressoCore.dir/collision.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/collision.cpp
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unu[  3%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/constraints.cpp.o
sed-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o -MF CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o.d -o CMakeFiles/EspressoCore.dir/comfixed_global.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/comfixed_global.cpp
[  4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/diamond.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/communication.cpp.o -MF CMakeFiles/EspressoCore.dir/communication.cpp.o.d -o CMakeFiles/EspressoCore.dir/communication.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/communication.cpp
[  4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/debug.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/constraints.cpp.o -MF CMakeFiles/EspressoCore.dir/constraints.cpp.o.d -o CMakeFiles/EspressoCore.dir/constraints.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/constraints.cpp
[  4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/diamond.cpp.o -MF CMakeFiles/EspressoCore.dir/diamond.cpp.o.d -o CMakeFiles/EspressoCore.dir/diamond.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/diamond.cpp
[  4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/dpd.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/debug.cpp.o -MF CMakeFiles/EspressoCore.dir/debug.cpp.o.d -o CMakeFiles/EspressoCore.dir/debug.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/debug.cpp
[  4%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/energy.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o -MF CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o.d -o CMakeFiles/EspressoCore.dir/domain_decomposition.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/domain_decomposition.cpp
[  5%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/errorhandling.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/dpd.cpp.o -MF CMakeFiles/EspressoCore.dir/dpd.cpp.o.d -o CMakeFiles/EspressoCore.dir/dpd.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/dpd.cpp
[  5%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/energy.cpp.o -MF CMakeFiles/EspressoCore.dir/energy.cpp.o.d -o CMakeFiles/EspressoCore.dir/energy.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/energy.cpp
[  5%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forcecap.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/errorhandling.cpp.o -MF CMakeFiles/EspressoCore.dir/errorhandling.cpp.o.d -o CMakeFiles/EspressoCore.dir/errorhandling.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/errorhandling.cpp
[  6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/forces.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o -MF CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o.d -o CMakeFiles/EspressoCore.dir/EspressoSystemInterface.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/EspressoSystemInterface.cpp
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/forcecap.cpp.o -MF CMakeFiles/EspressoCore.dir/forcecap.cpp.o.d -o CMakeFiles/EspressoCore.dir/forcecap.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/forcecap.cpp
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/forces.cpp.o -MF CMakeFiles/EspressoCore.dir/forces.cpp.o.d -o CMakeFiles/EspressoCore.dir/forces.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/forces.cpp
[  6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/galilei.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/galilei.cpp.o -MF CMakeFiles/EspressoCore.dir/galilei.cpp.o.d -o CMakeFiles/EspressoCore.dir/galilei.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/galilei.cpp
[  6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/ghosts.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/ghosts.cpp.o -MF CMakeFiles/EspressoCore.dir/ghosts.cpp.o.d -o CMakeFiles/EspressoCore.dir/ghosts.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/ghosts.cpp
[  6%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/global.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/global.cpp.o -MF CMakeFiles/EspressoCore.dir/global.cpp.o.d -o CMakeFiles/EspressoCore.dir/global.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/global.cpp
[  8%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/grid.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/grid.cpp.o -MF CMakeFiles/EspressoCore.dir/grid.cpp.o.d -o CMakeFiles/EspressoCore.dir/grid.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/grid.cpp
[  8%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o -MF CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o.d -o CMakeFiles/EspressoCore.dir/immersed_boundaries.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/immersed_boundaries.cpp
[  8%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/event.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/event.cpp.o -MF CMakeFiles/EspressoCore.dir/event.cpp.o.d -o CMakeFiles/EspressoCore.dir/event.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/event.cpp
[  9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrate.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/integrate.cpp.o -MF CMakeFiles/EspressoCore.dir/integrate.cpp.o.d -o CMakeFiles/EspressoCore.dir/integrate.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/integrate.cpp
[  9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o -MF CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o.d -o CMakeFiles/EspressoCore.dir/integrators/velocity_verlet_npt.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/integrators/velocity_verlet_npt.cpp
[  9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/layered.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/layered.cpp.o -MF CMakeFiles/EspressoCore.dir/layered.cpp.o.d -o CMakeFiles/EspressoCore.dir/layered.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/layered.cpp
[  9%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/metadynamics.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/metadynamics.cpp.o -MF CMakeFiles/EspressoCore.dir/metadynamics.cpp.o.d -o CMakeFiles/EspressoCore.dir/metadynamics.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/metadynamics.cpp
[ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o -MF CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o.d -o CMakeFiles/EspressoCore.dir/integrators/steepest_descent.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/integrators/steepest_descent.cpp
[ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/npt.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/npt.cpp.o -MF CMakeFiles/EspressoCore.dir/npt.cpp.o.d -o CMakeFiles/EspressoCore.dir/npt.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/npt.cpp
[ 10%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/nsquare.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/nsquare.cpp.o -MF CMakeFiles/EspressoCore.dir/nsquare.cpp.o.d -o CMakeFiles/EspressoCore.dir/nsquare.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/nsquare.cpp
[ 11%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o -MF CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o.d -o CMakeFiles/EspressoCore.dir/partCfg_global.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/partCfg_global.cpp
[ 11%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/particle_data.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/particle_data.cpp.o -MF CMakeFiles/EspressoCore.dir/particle_data.cpp.o.d -o CMakeFiles/EspressoCore.dir/particle_data.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/particle_data.cpp
[ 11%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polymer.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/polymer.cpp.o -MF CMakeFiles/EspressoCore.dir/polymer.cpp.o.d -o CMakeFiles/EspressoCore.dir/polymer.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/polymer.cpp
[ 11%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/polynom.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/polynom.cpp.o -MF CMakeFiles/EspressoCore.dir/polynom.cpp.o.d -o CMakeFiles/EspressoCore.dir/polynom.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/polynom.cpp
[ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/pressure.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/pressure.cpp.o -MF CMakeFiles/EspressoCore.dir/pressure.cpp.o.d -o CMakeFiles/EspressoCore.dir/pressure.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/pressure.cpp
[ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/random.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/random.cpp.o -MF CMakeFiles/EspressoCore.dir/random.cpp.o.d -o CMakeFiles/EspressoCore.dir/random.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/random.cpp
[ 12%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rattle.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/rattle.cpp.o -MF CMakeFiles/EspressoCore.dir/rattle.cpp.o.d -o CMakeFiles/EspressoCore.dir/rattle.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/rattle.cpp
[ 13%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o -MF CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o.d -o CMakeFiles/EspressoCore.dir/reaction_ensemble.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/reaction_ensemble.cpp
[ 13%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotate_system.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/rotate_system.cpp.o -MF CMakeFiles/EspressoCore.dir/rotate_system.cpp.o.d -o CMakeFiles/EspressoCore.dir/rotate_system.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/rotate_system.cpp
[ 13%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/rotation.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/rotation.cpp.o -MF CMakeFiles/EspressoCore.dir/rotation.cpp.o.d -o CMakeFiles/EspressoCore.dir/rotation.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/rotation.cpp
[ 13%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o -MF CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o.d -o CMakeFiles/EspressoCore.dir/RuntimeErrorCollector.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/RuntimeErrorCollector.cpp
[ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o -MF CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o.d -o CMakeFiles/EspressoCore.dir/RuntimeError.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/RuntimeError.cpp
[ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o -MF CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o.d -o CMakeFiles/EspressoCore.dir/RuntimeErrorStream.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/RuntimeErrorStream.cpp
[ 14%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/specfunc.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/specfunc.cpp.o -MF CMakeFiles/EspressoCore.dir/specfunc.cpp.o.d -o CMakeFiles/EspressoCore.dir/specfunc.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/specfunc.cpp
[ 16%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o -MF CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o.d -o CMakeFiles/EspressoCore.dir/statistics_chain.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/statistics_chain.cpp
[ 16%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/statistics.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/statistics.cpp.o -MF CMakeFiles/EspressoCore.dir/statistics.cpp.o.d -o CMakeFiles/EspressoCore.dir/statistics.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/statistics.cpp
[ 16%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o -MF CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o.d -o CMakeFiles/EspressoCore.dir/SystemInterface.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SystemInterface.cpp
[ 16%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/thermostat.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/thermostat.cpp.o -MF CMakeFiles/EspressoCore.dir/thermostat.cpp.o.d -o CMakeFiles/EspressoCore.dir/thermostat.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/thermostat.cpp
[ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/tuning.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/tuning.cpp.o -MF CMakeFiles/EspressoCore.dir/tuning.cpp.o.d -o CMakeFiles/EspressoCore.dir/tuning.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/tuning.cpp
[ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o -MF CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o.d -o CMakeFiles/EspressoCore.dir/virtual_sites.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/virtual_sites.cpp
[ 17%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o -MF CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o.d -o CMakeFiles/EspressoCore.dir/accumulators/Correlator.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/accumulators/Correlator.cpp
[ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o -MF CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o.d -o CMakeFiles/EspressoCore.dir/accumulators/MeanVarianceCalculator.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/accumulators/MeanVarianceCalculator.cpp
[ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o -MF CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o.d -o CMakeFiles/EspressoCore.dir/actor/ActorList.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/actor/ActorList.cpp
In file included from /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/MpiCallbacks.hpp:25,
                 from /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/communication.hpp:52,
                 from /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/tuning.cpp:24:
/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include/utils/NumeratedContainer.hpp:160:3: error: ‘size_t’ does not name a type
  160 |   size_t size() const { return m_container.size(); }
      |   ^~~~~~
/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include/utils/NumeratedContainer.hpp:30:1: note: ‘size_t’ is defined in header ‘<cstddef>’; did you forget to ‘#include <cstddef>’?
   29 | #include <unordered_map>
  +++ |+#include <cstddef>
   30 | 
[ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o -MF CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o.d -o CMakeFiles/EspressoCore.dir/actor/DipolarBarnesHut.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/actor/DipolarBarnesHut.cpp
[ 18%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o -MF CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o.d -o CMakeFiles/EspressoCore.dir/actor/DipolarDirectSum.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/actor/DipolarDirectSum.cpp
[ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o -MF CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o.d -o CMakeFiles/EspressoCore.dir/actor/Mmm1dgpuForce.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/actor/Mmm1dgpuForce.cpp
[ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o -MF CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o.d -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cosine.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/bonded_interactions/angle_cosine.cpp
[ 19%] Building CXX object src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o
cd /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/core && /usr/bin/x86_64-pc-linux-gnu-g++ -DBOOST_ALL_NO_LIB -DBOOST_MPI_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DEspressoCore_EXPORTS -DR123_USE_MULHILO64_C99 -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/SYSTEM -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build/src/config -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/utils/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/profiler/include -I/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/pdbparser/include -isystem /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/libs/Random123-1.09/include  -O2 -pipe -march=x86-64 -frecord-gcc-switches -fno-diagnostics-color -Wall -Wextra -Wno-sign-compare -Wno-unused-function -Wno-unused-variable -Wno-unused-parameter -Wno-missing-braces -Wno-implicit-fallthrough -Wno-clobbered -Wno-cast-function-type -pedantic -fPIC -pthread -std=c++14 -MD -MT src/core/CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o -MF CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o.d -o CMakeFiles/EspressoCore.dir/bonded_interactions/angle_cossquare.cpp.o -c /var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso/src/core/bonded_interactions/angle_cossquare.cpp
make[2]: *** [src/core/CMakeFiles/EspressoCore.dir/build.make:720: src/core/CMakeFiles/EspressoCore.dir/tuning.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build'
make[1]: *** [CMakeFiles/Makefile2:1985: src/core/CMakeFiles/EspressoCore.dir/all] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build'
make: *** [Makefile:136: all] Error 2
 * ERROR: sci-physics/espresso-4.1.3::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-physics/espresso-4.1.3::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-physics/espresso-4.1.3::gentoo'`.
 * The complete build log is located at '/var/log/emerge-log/build/sci-physics/espresso-4.1.3:20210529-213530.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-physics/espresso-4.1.3/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-physics/espresso-4.1.3/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso-4.1.3_build'
 * S: '/var/tmp/portage/sci-physics/espresso-4.1.3/work/espresso'