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Gentoo's Bugzilla – Attachment 702693 Details for
Bug 786099
sci-libs/dealii-9.2.0 - -- Could NOT find NETCDF
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CMakeError.log
CMakeError.log (text/plain), 18.67 KB, created by
Toralf Förster
on 2021-04-27 13:50:59 UTC
(
hide
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Description:
CMakeError.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2021-04-27 13:50:59 UTC
Size:
18.67 KB
patch
obsolete
>Performing C++ SOURCE FILE Test DEAL_II_HAVE_COMPLEX_OPERATOR_OVERLOADS failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_6fd0c && [1/2] Building CXX object CMakeFiles/cmTC_6fd0c.dir/src.cxx.o >FAILED: CMakeFiles/cmTC_6fd0c.dir/src.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DDEAL_II_HAVE_COMPLEX_OPERATOR_OVERLOADS -pipe -march=native -fno-diagnostics-color -Og -g -std=c++17 -o CMakeFiles/cmTC_6fd0c.dir/src.cxx.o -c src.cxx >src.cxx: In function âint main()â: >src.cxx:6:14: error: no match for âoperator*â (operand types are âdoubleâ and âstd::complex<float>â) > 6 | double() * std::complex<float>(); >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:6:36: note: mismatched types âconst std::complex<_Tp>â and âdoubleâ > 6 | double() * std::complex<float>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:6:36: note: mismatched types âconst std::complex<_Tp>â and âdoubleâ > 6 | double() * std::complex<float>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:6:36: note: deduced conflicting types for parameter â_Tpâ (âdoubleâ and âfloatâ) > 6 | double() * std::complex<float>(); > | ^ >src.cxx:7:27: error: no match for âoperator*â (operand types are âstd::complex<float>â and âdoubleâ) > 7 | std::complex<float>() * double(); >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:7:36: note: mismatched types âconst std::complex<_Tp>â and âdoubleâ > 7 | std::complex<float>() * double(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:7:36: note: deduced conflicting types for parameter âconst _Tpâ (âfloatâ and âdoubleâ) > 7 | std::complex<float>() * double(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:7:36: note: mismatched types âconst std::complex<_Tp>â and âdoubleâ > 7 | std::complex<float>() * double(); > | ^ >src.cxx:8:13: error: no match for âoperator*â (operand types are âfloatâ and âstd::complex<double>â) > 8 | float() * std::complex<double>(); >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:8:36: note: mismatched types âconst std::complex<_Tp>â and âfloatâ > 8 | float() * std::complex<double>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:8:36: note: mismatched types âconst std::complex<_Tp>â and âfloatâ > 8 | float() * std::complex<double>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:8:36: note: deduced conflicting types for parameter â_Tpâ (âfloatâ and âdoubleâ) > 8 | float() * std::complex<double>(); > | ^ >src.cxx:9:28: error: no match for âoperator*â (operand types are âstd::complex<double>â and âfloatâ) > 9 | std::complex<double>() * float(); >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:9:36: note: mismatched types âconst std::complex<_Tp>â and âfloatâ > 9 | std::complex<double>() * float(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:9:36: note: deduced conflicting types for parameter âconst _Tpâ (âdoubleâ and âfloatâ) > 9 | std::complex<double>() * float(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:9:36: note: mismatched types âconst std::complex<_Tp>â and âfloatâ > 9 | std::complex<double>() * float(); > | ^ >src.cxx:10:28: error: no match for âoperator*â (operand types are âstd::complex<double>â and âstd::complex<float>â) > 10 | std::complex<double>() * std::complex<float>(); > | ~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~ > | | | > | complex<double> complex<float> >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:10:50: note: deduced conflicting types for parameter â_Tpâ (âdoubleâ and âfloatâ) > 10 | std::complex<double>() * std::complex<float>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:10:50: note: deduced conflicting types for parameter âconst _Tpâ (âdoubleâ and âstd::complex<float>â) > 10 | std::complex<double>() * std::complex<float>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:10:50: note: deduced conflicting types for parameter â_Tpâ (âstd::complex<double>â and âfloatâ) > 10 | std::complex<double>() * std::complex<float>(); > | ^ >src.cxx:11:27: error: no match for âoperator*â (operand types are âstd::complex<float>â and âstd::complex<double>â) > 11 | std::complex<float>() * std::complex<double>(); > | ~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~ > | | | > | complex<float> complex<double> >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const std::complex<_Tp>&)â > 391 | operator*(const complex<_Tp>& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:391:5: note: template argument deduction/substitution failed: >src.cxx:11:50: note: deduced conflicting types for parameter â_Tpâ (âfloatâ and âdoubleâ) > 11 | std::complex<float>() * std::complex<double>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const std::complex<_Tp>&, const _Tp&)â > 400 | operator*(const complex<_Tp>& __x, const _Tp& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:400:5: note: template argument deduction/substitution failed: >src.cxx:11:50: note: deduced conflicting types for parameter âconst _Tpâ (âfloatâ and âstd::complex<double>â) > 11 | std::complex<float>() * std::complex<double>(); > | ^ >In file included from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: candidate: âtemplate<class _Tp> std::complex<_Tp> std::operator*(const _Tp&, const std::complex<_Tp>&)â > 409 | operator*(const _Tp& __x, const complex<_Tp>& __y) > | ^~~~~~~~ >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/complex:409:5: note: template argument deduction/substitution failed: >src.cxx:11:50: note: deduced conflicting types for parameter â_Tpâ (âstd::complex<float>â and âdoubleâ) > 11 | std::complex<float>() * std::complex<double>(); > | ^ >ninja: build stopped: subcommand failed. > > >Source file was: > > #include <complex> > > int main() > { > double() * std::complex<float>(); > std::complex<float>() * double(); > float() * std::complex<double>(); > std::complex<double>() * float(); > std::complex<double>() * std::complex<float>(); > std::complex<float>() * std::complex<double>(); > > return 0; > } > >Performing C++ SOURCE FILE Test DEAL_II_COMPILER_HAS_FUSE_LD_LLD failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_85b64 && [1/2] Building CXX object CMakeFiles/cmTC_85b64.dir/src.cxx.o >[2/2] Linking CXX executable cmTC_85b64 >FAILED: cmTC_85b64 >: && /usr/bin/x86_64-pc-linux-gnu-g++ -pipe -march=native -fno-diagnostics-color -Og -g -Werror -shared -fPIC -fuse-ld=lld -rdynamic CMakeFiles/cmTC_85b64.dir/src.cxx.o -o cmTC_85b64 -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 && : >collect2: fatal error: cannot find âldâ >compilation terminated. >ninja: build stopped: subcommand failed. > > >Source file was: > > #include <iostream> > void foo() { std::cout << "Hello, world!" << std::endl; } > >Performing C++ SOURCE FILE Test MKL_SYMBOL_CHECK failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_0ed48 && [1/2] Building CXX object CMakeFiles/cmTC_0ed48.dir/src.cxx.o >FAILED: CMakeFiles/cmTC_0ed48.dir/src.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DMKL_SYMBOL_CHECK -pthread -o CMakeFiles/cmTC_0ed48.dir/src.cxx.o -c src.cxx >src.cxx:2:14: fatal error: mkl.h: No such file or directory > 2 | #include <mkl.h> > | ^~~~~~~ >compilation terminated. >ninja: build stopped: subcommand failed. > > >Source file was: > > #include <mkl.h> > #include <vector> > int main(){ > const int m = 5; > const int n = 2; > std::vector<double> A(m*n,0.); > std::vector<double> B(m*n,0.); > mkl_domatcopy('C', 'T', m, n, 1., A.data(), n, B.data(), m); > return 0; > } >Performing C SOURCE FILE Test CMAKE_HAVE_LIBC_PTHREAD failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_a489e && [1/2] Building C object CMakeFiles/cmTC_a489e.dir/src.c.o >[2/2] Linking C executable cmTC_a489e >FAILED: cmTC_a489e >: && /usr/bin/x86_64-pc-linux-gnu-gcc -rdynamic CMakeFiles/cmTC_a489e.dir/src.c.o -o cmTC_a489e && : >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_a489e.dir/src.c.o: in function `main': >src.c:(.text+0x3e): undefined reference to `pthread_create' >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text+0x4a): undefined reference to `pthread_detach' >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text+0x56): undefined reference to `pthread_cancel' >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text+0x67): undefined reference to `pthread_join' >collect2: error: ld returned 1 exit status >ninja: build stopped: subcommand failed. > > >Source file was: >#include <pthread.h> > >static void* test_func(void* data) >{ > return data; >} > >int main(void) >{ > pthread_t thread; > pthread_create(&thread, NULL, test_func, NULL); > pthread_detach(thread); > pthread_cancel(thread); > pthread_join(thread, NULL); > pthread_atfork(NULL, NULL, NULL); > pthread_exit(NULL); > > return 0; >} > >Determining if the function pthread_create exists in the pthreads failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_0ee12 && [1/2] Building C object CMakeFiles/cmTC_0ee12.dir/CheckFunctionExists.c.o >[2/2] Linking C executable cmTC_0ee12 >FAILED: cmTC_0ee12 >: && /usr/bin/x86_64-pc-linux-gnu-gcc -DCHECK_FUNCTION_EXISTS=pthread_create -rdynamic CMakeFiles/cmTC_0ee12.dir/CheckFunctionExists.c.o -o cmTC_0ee12 -lpthreads && : >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lpthreads >collect2: error: ld returned 1 exit status >ninja: build stopped: subcommand failed. > > > >Performing C++ SOURCE FILE Test DEAL_II_HAS_AUTO_PTR failed with the following output: >Change Dir: /var/tmp/portage/sci-libs/dealii-9.2.0/work/dealii-9.2.0_build/CMakeFiles/CMakeTmp > >Run Build Command(s):/usr/bin/ninja cmTC_680c1 && [1/2] Building CXX object CMakeFiles/cmTC_680c1.dir/src.cxx.o >FAILED: CMakeFiles/cmTC_680c1.dir/src.cxx.o >/usr/bin/x86_64-pc-linux-gnu-g++ -DDEAL_II_HAS_AUTO_PTR -pipe -march=native -fno-diagnostics-color -Og -g -std=c++17 -Werror -o CMakeFiles/cmTC_680c1.dir/src.cxx.o -c src.cxx >src.cxx: In function âint main()â: >src.cxx:9:12: error: âtemplate<class> class std::auto_ptrâ is deprecated [-Werror=deprecated-declarations] > 9 | std::auto_ptr<int> x(i); > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/memory:83, > from src.cxx:2: >/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0/include/g++-v10/bits/unique_ptr.h:57:28: note: declared here > 57 | template<typename> class auto_ptr; > | ^~~~~~~~ >cc1plus: all warnings being treated as errors >ninja: build stopped: subcommand failed. > > >Source file was: > > #include <memory> > #include <boost/config.hpp> > > int main() > { > #ifndef BOOST_NO_AUTO_PTR > int *i = new int; > std::auto_ptr<int> x(i); > #endif > return 0; > } >
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