* Package: sci-biology/treeviewx-0.5.1-r3 * Repository: gentoo * Maintainer: sci-biology@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox @@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; This ebuild was merged at the following commit: https://github.com/gentoo/gentoo/commit/213dda1e7e302329aef034c0bbdd3d7154420144 (Mon Apr 5 04:54:39 UTC 2021) @@@@@ END @@@@@ emerge --info: Portage 3.0.18 (python 3.9.4-final-0, default/linux/amd64/17.1, gcc-10.2.0, glibc-2.33, 5.4.0-1029-aws x86_64) ================================================================= System uname: Linux-5.4.0-1029-aws-x86_64-Intel-R-_Xeon-R-_Platinum_8124M_CPU_@_3.00GHz-with-glibc2.33 KiB Mem: 71926568 total, 50298644 free KiB Swap: 0 total, 0 free sh bash 5.1_p4 ld GNU ld (Gentoo 2.35.2 p1) 2.35.2 app-shells/bash: 5.1_p4::gentoo dev-lang/perl: 5.32.1::gentoo dev-lang/python: 2.7.18_p8::gentoo, 3.7.10_p1::gentoo, 3.8.9::gentoo, 3.9.4::gentoo dev-lang/rust: 1.51.0::gentoo dev-util/cmake: 3.20.0::gentoo sys-apps/baselayout: 2.7-r1::gentoo sys-apps/openrc: 0.43.1::gentoo sys-apps/sandbox: 2.22::gentoo sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo sys-devel/automake: 1.16.3-r1::gentoo sys-devel/binutils: 2.35.2::gentoo sys-devel/gcc: 10.2.0-r5::gentoo sys-devel/gcc-config: 2.4::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.11::gentoo (virtual/os-headers) sys-libs/glibc: 2.33::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-extra-opts: sync-rsync-verify-metamanifest: yes sync-rsync-verify-max-age: 24 sync-rsync-verify-jobs: 1 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* GPL-2" CBUILD="x86_64-pc-linux-gnu" CC="x86_64-pc-linux-gnu-gcc" CFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXX="x86_64-pc-linux-gnu-g++" CXXFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" DISTDIR="/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/distdir" EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -k -b" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" MAKEOPTS="-j36" PKGDIR="/root/.packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl amd64 berkdb bzip2 cli crypt dri elogind fortran gdbm iconv ipv6 jumbo-build libglvnd libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" USERLAND="GNU" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RUSTFLAGS emerge history: 2021-04-05T18:09:40 >>> media-libs/libogg-1.3.4 2021-04-05T18:09:40 >>> x11-misc/util-macros-1.19.3 2021-04-05T18:09:41 >>> dev-libs/lzo-2.10 2021-04-05T18:09:41 >>> media-fonts/liberation-fonts-2.1.3 2021-04-05T18:09:41 >>> dev-libs/fribidi-1.0.10 2021-04-05T18:09:41 >>> x11-themes/hicolor-icon-theme-0.17 2021-04-05T18:09:42 >>> dev-libs/vala-common-0.48.12 2021-04-05T18:09:55 >>> virtual/ttf-fonts-1-r1 2021-04-05T18:09:39 >>> virtual/libintl-0-r2 2021-04-05T18:09:40 >>> app-arch/bzip2-1.0.8-r1 2021-04-05T18:10:07 >>> sys-libs/zlib-1.2.11-r4 2021-04-05T18:10:11 >>> media-libs/libpng-1.6.37-r2 2021-04-05T18:10:11 >>> dev-libs/expat-2.3.0 2021-04-05T18:10:17 >>> media-libs/freetype-2.10.4 2021-04-05T18:10:17 >>> dev-libs/libbsd-0.10.0 2021-04-05T18:10:18 >>> app-eselect/eselect-wxwidgets-20180529 2021-04-05T18:10:18 >>> x11-base/xorg-proto-2021.3 2021-04-05T18:10:18 >>> x11-libs/xtrans-1.4.0 2021-04-05T18:10:19 >>> dev-util/wayland-scanner-1.19.0 2021-04-05T18:10:19 >>> dev-lang/orc-0.4.31 2021-04-05T18:10:19 >>> app-text/iso-codes-4.6.0 2021-04-05T18:10:19 >>> media-libs/libvorbis-1.3.7 2021-04-05T18:10:20 >>> media-fonts/font-util-1.3.2-r1 2021-04-05T18:10:20 >>> sys-libs/binutils-libs-2.35.2 2021-04-05T18:10:20 >>> x11-libs/pixman-0.40.0 2021-04-05T18:10:21 >>> media-gfx/graphite2-1.3.14 2021-04-05T18:10:21 >>> gnome-base/gsettings-desktop-schemas-40.0 2021-04-05T18:10:21 >>> media-libs/libjpeg-turbo-2.0.6 2021-04-05T18:10:22 >>> sys-apps/util-linux-2.36.2 2021-04-05T18:11:08 >>> x11-libs/libxshmfence-1.3-r2 2021-04-05T18:11:08 >>> x11-libs/libXau-1.0.9-r1 2021-04-05T18:11:08 >>> x11-libs/libXdmcp-1.1.3 2021-04-05T18:11:08 >>> x11-libs/libICE-1.0.10 2021-04-05T18:11:09 >>> x11-themes/gnome-themes-standard-3.28 2021-04-05T18:11:09 >>> virtual/jpeg-100 2021-04-05T18:11:09 >>> app-text/docbook-xml-dtd-4.3-r2 2021-04-05T18:11:10 >>> dev-util/gdbus-codegen-2.66.7 2021-04-05T18:11:10 >>> dev-libs/wayland-1.19.0 2021-04-05T18:11:10 >>> media-libs/gstreamer-1.16.3 2021-04-05T18:11:10 >>> dev-lang/vala-0.48.12 2021-04-05T18:11:11 >>> dev-libs/atk-2.36.0 2021-04-05T18:11:11 >>> media-libs/graphene-1.10.2-r1 2021-04-05T18:11:11 >>> x11-libs/libpciaccess-0.16 2021-04-05T18:11:12 >>> app-accessibility/at-spi2-core-2.38.0 2021-04-05T18:11:12 >>> dev-lang/nasm-2.15.05 2021-04-05T18:11:12 >>> x11-base/xcb-proto-1.14.1 2021-04-05T18:11:13 >>> dev-python/mako-1.1.4 2021-04-05T18:11:13 >>> media-libs/fontconfig-2.13.1-r2 2021-04-05T18:11:33 >>> x11-libs/libSM-1.2.3-r1 2021-04-05T18:11:42 >>> dev-libs/wayland-protocols-1.20 2021-04-05T18:11:51 >>> x11-libs/libdrm-2.4.104 2021-04-05T18:11:53 >>> app-accessibility/at-spi2-atk-2.38.0 2021-04-05T18:11:54 >>> x11-libs/gdk-pixbuf-2.42.4 2021-04-05T18:11:56 >>> x11-libs/libxcb-1.14 2021-04-05T18:12:04 >>> app-eselect/eselect-fontconfig-1.1-r1 2021-04-05T18:12:17 >>> dev-util/gtk-update-icon-cache-3.24.26 2021-04-05T18:12:19 >>> x11-misc/compose-tables-1.7.0 2021-04-05T18:12:26 >>> x11-libs/libX11-1.7.0 2021-04-05T18:12:29 >>> x11-libs/libXext-1.3.4 2021-04-05T18:12:29 >>> x11-libs/libXrender-0.9.10-r2 2021-04-05T18:12:29 >>> x11-libs/libXfixes-5.0.3-r3 2021-04-05T18:12:34 >>> x11-libs/libXxf86vm-1.1.4-r2 2021-04-05T18:12:34 >>> x11-libs/libXv-1.0.11-r2 2021-04-05T18:12:34 >>> media-libs/libglvnd-1.3.2-r2 2021-04-05T18:12:36 >>> x11-libs/libXrandr-1.5.2 2021-04-05T18:12:36 >>> x11-libs/cairo-1.16.0-r4 2021-04-05T18:12:36 >>> x11-libs/libXft-2.3.3 2021-04-05T18:12:37 >>> x11-libs/libXcomposite-0.4.5 2021-04-05T18:12:38 >>> x11-libs/libXcursor-1.2.0 2021-04-05T18:12:38 >>> x11-libs/libXdamage-1.1.5 2021-04-05T18:12:38 >>> x11-libs/libXi-1.7.10 2021-04-05T18:12:54 >>> media-libs/harfbuzz-2.8.0 2021-04-05T18:12:52 >>> media-libs/mesa-21.0.1 2021-04-05T18:13:06 >>> x11-libs/pango-1.42.4-r2 2021-04-05T18:13:08 >>> media-libs/libepoxy-1.5.5 2021-04-05T18:13:12 >>> gnome-base/librsvg-2.50.3 2021-04-05T18:13:12 >>> media-libs/gst-plugins-base-1.16.3 2021-04-05T18:13:17 >>> x11-themes/adwaita-icon-theme-3.38.0 2021-04-05T18:13:24 >>> x11-libs/gtk+-3.24.26 2021-04-05T18:13:30 >>> x11-libs/gtk+-2.24.32-r1 2021-04-05T18:13:35 >>> x11-themes/gtk-engines-adwaita-3.28 2021-04-05T18:13:37 >>> x11-libs/wxGTK-3.0.4-r2 2021-04-05T18:13:42 >>> sci-biology/treeviewx-0.5.1-r3 2021-04-05T18:14:04 >>> sci-biology/treeviewx-0.5.1-r3 2021-04-05T18:14:26 >>> dev-lang/python-exec-2.4.6-r4 2021-04-05T18:14:29 >>> sys-devel/gcc-config-2.4 2021-04-05T18:14:33 >>> sys-devel/binutils-config-5.4 >>> Unpacking source... >>> Unpacking tv-0.5.1.tar.gz to /var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work >>> Source unpacked in /var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work >>> Preparing source in /var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1 ... * Applying treeviewx-wxt.patch ... [ ok ] * Applying treeviewx-0.5.1-gcc4.3.patch ... [ ok ] * Applying treeviewx-0.5.1-70_choose_tree.patch ... [ ok ] * Applying treeviewx-0.5.1-fix_loading_crash.patch ... [ ok ] * Applying treeviewx-0.5.1-wx30.patch ... [ ok ] * Applying treeviewx-0.5.1-svg.patch ... [ ok ] * Applying treeviewx-0.5.1-treeview-xpm-not-xbm.patch ... [ ok ] * Applying treeviewx-0.5.1-wxstring-maxlen.patch ... [ ok ] * Running eautoreconf in '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1' ... * Running aclocal ... [ ok ] * Running autoconf --force ... [ ok ] * Running automake --add-missing --copy --force-missing ... [ ok ] * Running elibtoolize in: tv-0.5.1/ >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1 ... * * Requested wxWidgets: 3.0 * Using wxWidgets: gtk2-unicode-3.0 * * econf: updating tv-0.5.1/config.sub with /usr/share/gnuconfig/config.sub * econf: updating tv-0.5.1/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/treeviewx-0.5.1-r3 --htmldir=/usr/share/doc/treeviewx-0.5.1-r3/html --libdir=/usr/lib64 checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-pc-linux-gnu-g++... none checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking whether make sets $(MAKE)... (cached) yes checking for wx-config... /usr/lib64/wx/config/gtk2-unicode-3.0 checking wxWindows version... 3.0.4 checking whether we will use SVG... yes checking for main in -l... no configure: WARNING: "library required for SVG support not found" checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ncl-2.0/Makefile config.status: creating ncl-2.0/src/Makefile config.status: creating TreeLib/Makefile config.status: creating tv.spec config.status: executing depfiles commands >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1 ... make -j36 Making all in ncl-2.0 make[1]: Entering directory '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1/ncl-2.0' Making all in src make[2]: Entering directory '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1/ncl-2.0/src' x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o allelesblock.o allelesblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o assumptionsblock.o assumptionsblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o charactersblock.o charactersblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o datablock.o datablock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o discretedatum.o discretedatum.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o discretematrix.o discretematrix.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o distancedatum.o distancedatum.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o distancesblock.o distancesblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o nexus.o nexus.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o nexusblock.o nexusblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o nexustoken.o nexustoken.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o setreader.o setreader.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o nxsstring.o nxsstring.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o nxsdate.o nxsdate.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o taxablock.o taxablock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o treesblock.o treesblock.cpp x86_64-pc-linux-gnu-g++ -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"tv\" -DVERSION=\"0.5.1\" -I. -DNDEBUG -O2 -pipe -march=x86-64 -frecord-gcc-switches -Wno-deprecated -I/usr/lib64/wx/include/gtk2-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -DUSE_WXWINDOWS -DUSE_SVG -c -o xnexus.o xnexus.cpp nexus.cpp: In member function ‘char* Nexus::NCLCopyrightNotice()’: nexus.cpp:9:31: warning: ISO C++ forbids converting a string constant to â€-Wwrite-strings][]] 9 | #define NCL_COPYRIGHT "Copyright (c) 2000 by Paul O. Lewis" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nexus.cpp:9:31: note: in definition of macro ‘NCL_COPYRIGHT’ 9 | #define NCL_COPYRIGHT "Copyright (c) 2000 by Paul O. Lewis" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nexus.cpp: In member function ‘char* Nexus::NCLHomePageURL()’: nexus.cpp:13:32: warning: ISO C++ forbids converting a string constant to â€-Wwrite-strings][]] 13 | #define NCL_HOMEPAGEURL "http://lewis.eeb.uconn.edu/lewishome/software.html" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nexus.cpp:13:32: note: in definition of macro ‘NCL_HOMEPAGEURL’ 13 | #define NCL_HOMEPAGEURL "http://lewis.eeb.uconn.edu/lewishome/software.html" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nexus.cpp: In member function ‘char* Nexus::NCLNameAndVersion()’: nexus.cpp:8:31: warning: ISO C++ forbids converting a string constant to â€-Wwrite-strings][]] 8 | #define NCL_NAME_AND_VERSION "NCL version 2.01" | ^~~~~~~~~~~~~~~~~~ nexus.cpp:351:9: note: in expansion of macro ‘NCL_NAME_AND_VERSION’ 351 | return NCL_NAME_AND_VERSION; | ^~~~~~~~~~~~~~~~~~~~ allelesblock.cpp: In member function ‘virtual void AllelesBlock::Report(std::ostream&)’: allelesblock.cpp:2238:24: warning: ISO C++ forbids converting a string constant to â€-Wwrite-strings][]] 2238 | DebugShowMatrix( out, " " ); | ^~~~~~ charactersblock.cpp: In member function ‘virtual void CharactersBlock::Report(std::ostream&)’: charactersblock.cpp:3273:24: warning: ISO C++ forbids converting a string constant to â€-Wwrite-strings][]] 3273 | DebugShowMatrix( out, " " ); | ^~~~~~ rm -f libncl.a ar cru libncl.a allelesblock.o assumptionsblock.o charactersblock.o datablock.o discretedatum.o discretematrix.o distancedatum.o distancesblock.o nexus.o nexusblock.o nexustoken.o setreader.o nxsstring.o nxsdate.o taxablock.o treesblock.o xnexus.o make[2]: ar: No such file or directory make[2]: *** [Makefile:330: libncl.a] Error 127 make[2]: Leaving directory '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1/ncl-2.0/src' make[1]: *** [Makefile:321: all-recursive] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1/ncl-2.0' make: *** [Makefile:477: all-recursive] Error 1 * ERROR: sci-biology/treeviewx-0.5.1-r3::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-biology/treeviewx-0.5.1-r3::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-biology/treeviewx-0.5.1-r3::gentoo'`. * The complete build log is located at '/var/log/emerge-log/build/sci-biology/treeviewx-0.5.1-r3:20210405-161439.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/temp/environment'. * Working directory: '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1' * S: '/var/tmp/portage/sci-biology/treeviewx-0.5.1-r3/work/tv-0.5.1'