***** automake *****
***** PWD: /var/tmp/portage/sci-biology/yass-1.14-r2/work/yass-1.14
***** automake --add-missing --copy --force-missing

configure.ac:67: error: version mismatch.  This is Automake 1.16.3,
configure.ac:67: but the definition used by this AM_INIT_AUTOMAKE
configure.ac:67: comes from Automake 1.11.  You should recreate
configure.ac:67: aclocal.m4 with aclocal and run automake again.
configure.ac:67: warning: The 'AM_PROG_MKDIR_P' macro is deprecated, and its use is discouraged.
configure.ac:67: You should use the Autoconf-provided 'AC_PROG_MKDIR_P' macro instead,
configure.ac:67: and use '$(MKDIR_P)' instead of '$(mkdir_p)'in your Makefile.am files.