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Gentoo's Bugzilla – Attachment 680434 Details for
Bug 762787
dev-perl/PDL-2.17.0-r1 fails to compile
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build.log
build.log (text/plain), 10.34 KB, created by
Agostino Sarubbo
on 2020-12-31 13:59:01 UTC
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Description:
build.log
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MIME Type:
Creator:
Agostino Sarubbo
Created:
2020-12-31 13:59:01 UTC
Size:
10.34 KB
patch
obsolete
> * Package: dev-perl/PDL-2.17.0-r1 > * Repository: gentoo > * Maintainer: sci@gentoo.org perl@gentoo.org > * USE: abi_x86_64 amd64 badval elibc_glibc fortran kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > > >@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ >This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; >This ebuild was merged at the following commit: >https://github.com/gentoo/gentoo/commit/d0cf69630da2bc618cb3131294c982d1da7450c2 (Thu Dec 31 13:36:47 UTC 2020) >@@@@@ END @@@@@ > > > >emerge --info: >Portage 3.0.12 (python 3.7.9-final-0, default/linux/amd64/17.1, gcc-10.2.0, glibc-2.32-r6, 5.4.0-1029-aws x86_64) >================================================================= >System uname: Linux-5.4.0-1029-aws-x86_64-Intel-R-_Xeon-R-_Platinum_8124M_CPU_@_3.00GHz-with-gentoo-2.7 >KiB Mem: 71926568 total, 44249972 free >KiB Swap: 0 total, 0 free >sh bash 5.1_p4 >ld GNU ld (Gentoo 2.35.1 p2) 2.35.1 >app-shells/bash: 5.1_p4::gentoo >dev-lang/perl: 5.30.3-r1::gentoo >dev-lang/python: 2.7.18-r5::gentoo, 3.6.12-r1::gentoo, 3.7.9-r1::gentoo, 3.8.7::gentoo, 3.9.1::gentoo >dev-util/cmake: 3.19.2::gentoo >dev-util/pkgconfig: 0.29.2::gentoo >sys-apps/baselayout: 2.7-r1::gentoo >sys-apps/openrc: 0.42.1::gentoo >sys-apps/sandbox: 2.20::gentoo >sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo >sys-devel/automake: 1.16.3-r1::gentoo >sys-devel/binutils: 2.35.1-r1::gentoo >sys-devel/gcc: 10.2.0-r5::gentoo >sys-devel/gcc-config: 2.3.2-r1::gentoo >sys-devel/libtool: 2.4.6-r6::gentoo >sys-devel/make: 4.3::gentoo >sys-kernel/linux-headers: 5.10::gentoo (virtual/os-headers) >sys-libs/glibc: 2.32-r6::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > sync-rsync-verify-jobs: 1 > sync-rsync-extra-opts: > sync-rsync-verify-max-age: 24 > sync-rsync-verify-metamanifest: yes > >ACCEPT_KEYWORDS="amd64 ~amd64" >ACCEPT_LICENSE="* Artistic GPL-1+ PerlDL public-domain" >CBUILD="x86_64-pc-linux-gnu" >CFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXXFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" >DISTDIR="/var/tmp/portage/dev-perl/PDL-2.17.0-r1/distdir" >EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -k -b" >ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" >FCFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -pipe -march=x86-64 -frecord-gcc-switches" >GENTOO_MIRRORS="http://distfiles.gentoo.org" >LANG="en_US.utf8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" >MAKEOPTS="-j36 V=1" >PKGDIR="/root/.packages" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >USE="acl amd64 badval berkdb bzip2 cli crypt dri elogind fortran gdbm iconv ipv6 jumbo-build libglvnd libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" USERLAND="GNU" >Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS > > > > > >emerge history: >2020-12-31T14:38:55 >>> x11-base/xorg-proto-2020.1 >2020-12-31T14:38:55 >>> dev-perl/Sub-Install-0.928.0 >2020-12-31T14:38:55 >>> virtual/perl-Time-HiRes-1.976.0 >2020-12-31T14:38:55 >>> virtual/perl-XSLoader-0.300.0-r3 >2020-12-31T14:38:55 >>> dev-perl/Params-Util-1.70.0 >2020-12-31T14:38:56 >>> virtual/perl-IO-1.400.0 >2020-12-31T14:38:56 >>> app-arch/sharutils-4.15.2-r2 >2020-12-31T14:38:56 >>> virtual/perl-Text-Balanced-2.30.0-r7 >2020-12-31T14:38:55 >>> dev-perl/Safe-Isa-1.0.8 >2020-12-31T14:38:56 >>> virtual/fortran-0 >2020-12-31T14:38:56 >>> virtual/perl-Storable-3.150.0 >2020-12-31T14:38:57 >>> dev-perl/Filter-1.600.0 >2020-12-31T14:38:57 >>> dev-perl/Astro-FITS-Header-3.70.0-r1 >2020-12-31T14:38:57 >>> dev-perl/File-Which-1.230.0 >2020-12-31T14:38:57 >>> media-libs/libpng-1.6.37-r2 >2020-12-31T14:38:58 >>> virtual/perl-Digest-1.170.100_rc-r10 >2020-12-31T14:38:57 >>> virtual/perl-HTTP-Tiny-0.76.0-r1 >2020-12-31T14:38:57 >>> virtual/perl-Digest-MD5-2.550.0-r2 >2020-12-31T14:38:58 >>> dev-python/mako-1.1.3-r1 >2020-12-31T14:38:58 >>> dev-perl/Term-ReadLine-Perl-1.30.300-r2 >2020-12-31T14:38:58 >>> virtual/perl-Filter-Simple-0.950.0-r2 >2020-12-31T14:38:59 >>> dev-perl/Devel-CheckLib-1.140.0 >2020-12-31T14:38:59 >>> x11-libs/libpciaccess-0.16 >2020-12-31T14:38:59 >>> x11-base/xcb-proto-1.14.1 >2020-12-31T14:38:58 >>> x11-libs/xtrans-1.4.0 >2020-12-31T14:38:57 >>> dev-perl/IO-Tty-1.120.0 >2020-12-31T14:39:23 >>> x11-libs/libXdmcp-1.1.3 >2020-12-31T14:39:23 >>> x11-libs/libXau-1.0.9-r1 >2020-12-31T14:39:23 >>> x11-libs/libxshmfence-1.3-r2 >2020-12-31T14:39:29 >>> dev-perl/Data-OptList-0.110.0 >2020-12-31T14:39:31 >>> dev-perl/File-ShareDir-Install-0.130.0 >2020-12-31T14:39:28 >>> dev-perl/PerlIO-Layers-0.11.0-r1 >2020-12-31T14:39:34 >>> dev-perl/Parse-RecDescent-1.967.15 >2020-12-31T14:39:59 >>> x11-libs/libdrm-2.4.103 >2020-12-31T14:39:44 >>> dev-perl/ExtUtils-F77-1.240.0 >2020-12-31T14:40:02 >>> x11-libs/libICE-1.0.10 >2020-12-31T14:39:47 >>> dev-perl/Digest-SHA1-2.130.0-r2 >2020-12-31T14:39:50 >>> dev-perl/Inline-0.800.0 >2020-12-31T14:40:06 >>> dev-perl/IPC-Run-0.960.0 >2020-12-31T14:39:45 >>> media-libs/gd-2.3.0 >2020-12-31T14:40:18 >>> x11-libs/libxcb-1.14 >2020-12-31T14:40:22 >>> dev-perl/Sub-Exporter-0.987.0 >2020-12-31T14:40:33 >>> x11-libs/libSM-1.2.3-r1 >2020-12-31T14:40:24 >>> dev-perl/Pegex-0.640.0 >2020-12-31T14:40:36 >>> dev-perl/Module-Compile-0.350.0 >2020-12-31T14:40:45 >>> x11-misc/compose-tables-1.7.0 >2020-12-31T14:40:47 >>> dev-perl/Sub-Exporter-Progressive-0.1.13 >2020-12-31T14:40:51 >>> dev-perl/Inline-C-0.780.0 >2020-12-31T14:40:56 >>> x11-libs/libX11-1.7.0 >2020-12-31T14:41:03 >>> x11-libs/libXext-1.3.4 >2020-12-31T14:41:03 >>> x11-libs/libXt-1.2.0 >2020-12-31T14:40:58 >>> dev-perl/File-Map-0.670.0 >2020-12-31T14:41:04 >>> x11-libs/libXfixes-5.0.3-r3 >2020-12-31T14:41:04 >>> x11-libs/libXrender-0.9.10-r2 >2020-12-31T14:41:08 >>> x11-libs/libXxf86vm-1.1.4-r2 >2020-12-31T14:41:08 >>> media-libs/libglvnd-1.3.2-r2 >2020-12-31T14:41:10 >>> x11-libs/libXmu-1.1.3 >2020-12-31T14:41:10 >>> x11-libs/libXpm-3.5.13 >2020-12-31T14:41:13 >>> x11-libs/libXi-1.7.10 >2020-12-31T14:41:14 >>> x11-libs/libXdamage-1.1.5 >2020-12-31T14:41:17 >>> x11-libs/libXrandr-1.5.2 >2020-12-31T14:41:27 >>> x11-libs/libXaw-1.0.13-r2 >2020-12-31T14:41:32 >>> media-libs/mesa-20.3.2 >2020-12-31T14:41:38 >>> virtual/opengl-7.0-r2 >2020-12-31T14:41:41 >>> media-libs/glu-9.0.1 >2020-12-31T14:41:44 >>> virtual/glu-9.0-r2 >2020-12-31T14:41:47 >>> media-libs/freeglut-3.2.1 >2020-12-31T14:41:49 >>> dev-perl/OpenGL-0.700.0 >2020-12-31T14:41:36 >>> sci-visualization/gnuplot-5.4.1-r1 >2020-12-31T14:42:11 >>> sys-devel/gcc-config-2.3.2-r1 >2020-12-31T14:42:18 >>> sys-devel/binutils-config-5.3.2 > > > * Using following Fortran compiler: > * F77: x86_64-pc-linux-gnu-gfortran > * FC: x86_64-pc-linux-gnu-gfortran >>>> Unpacking source... >>>> Unpacking PDL-2.017.tar.gz to /var/tmp/portage/dev-perl/PDL-2.17.0-r1/work >>>> Source unpacked in /var/tmp/portage/dev-perl/PDL-2.17.0-r1/work >>>> Preparing source in /var/tmp/portage/dev-perl/PDL-2.17.0-r1/work/PDL-2.017 ... > * Applying PDL-2.17.0-makemakerfix.patch ... > [ ok ] > * Applying PDL-2.17.0-fortran.patch ... >patching file Lib/Minuit/Makefile.PL >Hunk #1 succeeded at 142 (offset -7 lines). >patching file Lib/Slatec/Makefile.PL >Hunk #1 succeeded at 132 with fuzz 1 (offset -4 lines). > [ ok ] > * Applying PDL-2.17.0-shared-hdf.patch ... > [ ok ] > * Applying PDL-2.17.0-dot-in-inc.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-perl/PDL-2.17.0-r1/work/PDL-2.017 ... > * Using ExtUtils::MakeMaker > * perl Makefile.PL PREFIX=/usr INSTALLDIRS=vendor INSTALLMAN3DIR=none DESTDIR=/var/tmp/portage/dev-perl/PDL-2.17.0-r1/image/ >Makefile.PL: DEPENDENCY ERROR: USE_POGL requires at least OpenGL version 0.6702! >>>> Source configured. >>>> Compiling source in /var/tmp/portage/dev-perl/PDL-2.17.0-r1/work/PDL-2.017 ... >>>> Source compiled. > * Skipping make test/check due to ebuild restriction. >>>> Test phase [disabled because of RESTRICT=test]: dev-perl/PDL-2.17.0-r1 > >>>> Install dev-perl/PDL-2.17.0-r1 into /var/tmp/portage/dev-perl/PDL-2.17.0-r1/image/ >cp: target '/var/tmp/portage/dev-perl/PDL-2.17.0-r1/image///usr/lib64/perl5/vendor_perl/5.30.3/x86_64-linux/PDL/Doc' is not a directory > * ERROR: dev-perl/PDL-2.17.0-r1::gentoo failed (install phase): > * (no error message) > * > * Call stack: > * ebuild.sh, line 125: Called src_install > * environment, line 2879: Called die > * The specific snippet of code: > * cp Doc/{scantree,mkhtmldoc}.pl "${D}"/${VENDOR_ARCH}/PDL/Doc || die > * > * If you need support, post the output of `emerge --info '=dev-perl/PDL-2.17.0-r1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=dev-perl/PDL-2.17.0-r1::gentoo'`. > * The complete build log is located at '/var/log/emerge-log/build/dev-perl/PDL-2.17.0-r1:20201231-134226.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-perl/PDL-2.17.0-r1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/dev-perl/PDL-2.17.0-r1/temp/environment'. > * Working directory: '/var/tmp/portage/dev-perl/PDL-2.17.0-r1/work/PDL-2.017' > * S: '/var/tmp/portage/dev-perl/PDL-2.17.0-r1/work/PDL-2.017'
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bug 762787
: 680434