* Package: sci-visualization/gri-2.12.23-r1 * Repository: gentoo * Maintainer: sci@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox test userpriv usersandbox @@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; This ebuild was merged at the following commit: https://github.com/gentoo-mirror/gentoo/commit/7f2acecb82ecdaebcc2fdb9da0dba41cfe9363a5 (Fri Sep 11 09:05:43 UTC 2020) @@@@@ END @@@@@ emerge --info: Portage 3.0.6 (python 3.8.5-final-0, default/linux/amd64/17.1, gcc-10.2.0, glibc-2.32-r1, 5.4.0-1021-aws x86_64) ================================================================= System uname: Linux-5.4.0-1021-aws-x86_64-Intel-R-_Xeon-R-_Platinum_8175M_CPU_@_2.50GHz-with-glibc2.2.5 KiB Mem: 64359960 total, 25326388 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Fri, 11 Sep 2020 09:05:42 +0000 sh bash 5.0_p18 ld GNU ld (Gentoo 2.34 p6) 2.34.0 app-shells/bash: 5.0_p18::gentoo dev-lang/perl: 5.30.3-r1::gentoo dev-lang/python: 2.7.18-r2::gentoo, 3.6.12::gentoo, 3.7.9::gentoo, 3.8.5::gentoo, 3.9.0_rc1::gentoo dev-util/cmake: 3.18.2::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/openrc: 0.42.1::gentoo sys-apps/sandbox: 2.20::gentoo sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo sys-devel/automake: 1.16.2::gentoo sys-devel/binutils: 2.34-r2::gentoo sys-devel/gcc: 10.2.0-r1::gentoo sys-devel/gcc-config: 2.3.2::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.8::gentoo (virtual/os-headers) sys-libs/glibc: 2.32-r1::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: sync-rsync-verify-jobs: 1 sync-rsync-verify-max-age: 24 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* GPL-2" CBUILD="x86_64-pc-linux-gnu" CC="x86_64-pc-linux-gnu-clang" CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXX="x86_64-pc-linux-gnu-clang++" CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" DISTDIR="/var/tmp/portage/sci-visualization/gri-2.12.23-r1/distdir" EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -b -k" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="C.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -fuse-ld=lld" MAKEOPTS="-j16 V=1" PKGDIR="/root/.packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl amd64 berkdb bzip2 cli crypt dri elogind fortran gdbm iconv ipv6 jumbo-build libglvnd libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd test unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" USERLAND="GNU" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS >>> Unpacking source... >>> Unpacking gri-2.12.23.tar.gz to /var/tmp/portage/sci-visualization/gri-2.12.23-r1/work >>> Source unpacked in /var/tmp/portage/sci-visualization/gri-2.12.23-r1/work >>> Preparing source in /var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23 ... * Applying gri-2.12.18-postscript.patch ... [ ok ] * Applying gri-2.12.23-perl-5.16.patch ... [ ok ] * Applying gri-2.12.23-texinfo5.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23 ... * econf: updating gri-2.12.23/config.sub with /usr/share/gnuconfig/config.sub * econf: updating gri-2.12.23/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --libdir=/usr/lib64 checking for a BSD-compatible install... /usr/lib/portage/python3.8/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for x86_64-pc-linux-gnu-ranlib... llvm-ranlib checking for a BSD-compatible install... /usr/lib/portage/python3.8/ebuild-helpers/xattr/install -c checking whether make sets $(MAKE)... (cached) yes checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-clang checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-clang accepts -g... yes checking for x86_64-pc-linux-gnu-clang option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of x86_64-pc-linux-gnu-clang... none checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-clang++ accepts -g... yes checking dependency style of x86_64-pc-linux-gnu-clang++... none checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-clang++ -E checking for old C++ subroutine called string::remove... no checking for gcc compiler... checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E yes checking for C++ compiler with new headers as of August 2002... yes checking for DEC cxx compiler... no checking for DEC alpha computer... no checking for BeOS environment... no checking for FreeBSD system... no checking for OPENBSD system... no checking for HPUX environment... no checking for NetBSD system... no checking for for Sun Microsystems computer... no checking for for IBM AIX computer with IBM compiler... no checking for for mingw32 system... no checking to see whether this machine is big endian or little endian... little checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking for netcdf library... yes done checking for convert... yes checking for ANSI C header files... (cached) yes checking for poptReadConfigFile in -lpopt... no checking for readline in -lreadline... no checking for pid_t... yes checking for isnan... no checking for isinf... no checking for acosh... no checking for getcwd... no checking for popen... no checking for mkstemp... no checking for tmpnam... no checking for tempnam... no checking for gethostname... no checking for access... no checking for lstat... no checking for stat... no checking for strerror... no checking whether getenv is declared... yes checking whether drand48 is declared... yes configure: creating ./config.status config.status: creating Makefile config.status: creating debian/Makefile config.status: creating doc/Makefile config.status: creating doc/examples/Makefile config.status: creating doc/tst_suite/Makefile config.status: creating doc/resources/Makefile config.status: creating doc/screenshots/Makefile config.status: creating src/Makefile config.status: creating src/popt/Makefile config.status: executing depfiles commands >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23 ... make -j16 V=1 Making all in src make[1]: Entering directory '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23/src' Making all in popt make[2]: Entering directory '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23/src/popt' x86_64-pc-linux-gnu-clang -DPACKAGE_NAME=\"gri\" -DPACKAGE_TARNAME=\"gri\" -DPACKAGE_VERSION=\"2.12.23\" -DPACKAGE_STRING=\"gri\ 2.12.23\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"gri\" -DVERSION=\"2.12.23\" -DGRI_IS_BIG_ENDIAN=0 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBNETCDF=1 -DSTDC_HEADERS=1 -DHAVE_GETENV=1 -DHAVE_DRAND48=1 -I. -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c findme.c x86_64-pc-linux-gnu-clang -DPACKAGE_NAME=\"gri\" -DPACKAGE_TARNAME=\"gri\" -DPACKAGE_VERSION=\"2.12.23\" -DPACKAGE_STRING=\"gri\ 2.12.23\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"gri\" -DVERSION=\"2.12.23\" -DGRI_IS_BIG_ENDIAN=0 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBNETCDF=1 -DSTDC_HEADERS=1 -DHAVE_GETENV=1 -DHAVE_DRAND48=1 -I. -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c popt.c x86_64-pc-linux-gnu-clang -DPACKAGE_NAME=\"gri\" -DPACKAGE_TARNAME=\"gri\" -DPACKAGE_VERSION=\"2.12.23\" -DPACKAGE_STRING=\"gri\ 2.12.23\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"gri\" -DVERSION=\"2.12.23\" -DGRI_IS_BIG_ENDIAN=0 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBNETCDF=1 -DSTDC_HEADERS=1 -DHAVE_GETENV=1 -DHAVE_DRAND48=1 -I. -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c poptconfig.c x86_64-pc-linux-gnu-clang -DPACKAGE_NAME=\"gri\" -DPACKAGE_TARNAME=\"gri\" -DPACKAGE_VERSION=\"2.12.23\" -DPACKAGE_STRING=\"gri\ 2.12.23\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"gri\" -DVERSION=\"2.12.23\" -DGRI_IS_BIG_ENDIAN=0 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBNETCDF=1 -DSTDC_HEADERS=1 -DHAVE_GETENV=1 -DHAVE_DRAND48=1 -I. -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c popthelp.c x86_64-pc-linux-gnu-clang -DPACKAGE_NAME=\"gri\" -DPACKAGE_TARNAME=\"gri\" -DPACKAGE_VERSION=\"2.12.23\" -DPACKAGE_STRING=\"gri\ 2.12.23\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"gri\" -DVERSION=\"2.12.23\" -DGRI_IS_BIG_ENDIAN=0 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIBNETCDF=1 -DSTDC_HEADERS=1 -DHAVE_GETENV=1 -DHAVE_DRAND48=1 -I. -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c poptparse.c popthelp.c:230:24: warning: 'memset' call operates on objects of type 'char' while the size is based on a different type 'char *' [-Wsizeof-pointer-memaccess] memset(str, 0, sizeof(str)); ~~~ ^~~ popthelp.c:230:24: note: did you mean to provide an explicit length? memset(str, 0, sizeof(str)); ^~~ popt.c:27:15: error: static declaration of 'strerror' follows non-static declaration static char * strerror(int errno) { ^ /usr/include/string.h:403:14: note: previous declaration is here extern char *strerror (int __errnum) __THROW; ^ 1 error generated. make[2]: *** [Makefile:229: popt.o] Error 1 make[2]: *** Waiting for unfinished jobs.... 1 warning generated. make[2]: Leaving directory '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23/src/popt' make[1]: *** [Makefile:422: all-recursive] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23/src' make: *** [Makefile:223: all-recursive] Error 1 * ERROR: sci-visualization/gri-2.12.23-r1::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-visualization/gri-2.12.23-r1::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-visualization/gri-2.12.23-r1::gentoo'`. * The complete build log is located at '/var/log/emerge-log/build/sci-visualization/gri-2.12.23-r1:20200911-104958.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/temp/environment'. * Working directory: '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23' * S: '/var/tmp/portage/sci-visualization/gri-2.12.23-r1/work/gri-2.12.23'