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Gentoo's Bugzilla – Attachment 659094 Details for
Bug 741096
dev-lang/gdl-0.9.6-r3 fails to compile
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build.log
build.log (text/plain), 11.04 KB, created by
Agostino Sarubbo
on 2020-09-08 07:10:43 UTC
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Description:
build.log
Filename:
MIME Type:
Creator:
Agostino Sarubbo
Created:
2020-09-08 07:10:43 UTC
Size:
11.04 KB
patch
obsolete
> * Package: dev-lang/gdl-0.9.6-r3 > * Repository: gentoo > * Maintainer: sci@gentoo.org > * USE: abi_x86_64 amd64 eigen elibc_glibc imagemagick kernel_linux openmp python_targets_python2_7 userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > > >@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ >This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; >This ebuild was merged at the following commit: >https://github.com/gentoo-mirror/gentoo/commit/01831a58a31c2108e50b7ea35ecb528471016f72 (Tue Sep 8 02:35:32 UTC 2020) >@@@@@ END @@@@@ > > > >emerge --info: >Portage 3.0.5 (python 3.8.5-final-0, default/linux/amd64/17.1, gcc-10.2.0, glibc-2.32-r1, 5.4.0-1021-aws x86_64) >================================================================= >System uname: Linux-5.4.0-1021-aws-x86_64-Intel-R-_Xeon-R-_Platinum_8175M_CPU_@_2.50GHz-with-glibc2.2.5 >KiB Mem: 64359960 total, 29340912 free >KiB Swap: 0 total, 0 free >Timestamp of repository gentoo: Tue, 08 Sep 2020 02:35:31 +0000 >sh bash 5.0_p18 >ld GNU ld (Gentoo 2.34 p6) 2.34.0 >app-shells/bash: 5.0_p18::gentoo >dev-java/java-config: 2.3.1::gentoo >dev-lang/perl: 5.30.3-r1::gentoo >dev-lang/python: 2.7.18-r1::gentoo, 3.6.12::gentoo, 3.7.9::gentoo, 3.8.5::gentoo, 3.9.0_rc1::gentoo >dev-util/cmake: 3.18.2::gentoo >sys-apps/baselayout: 2.7::gentoo >sys-apps/openrc: 0.42.1::gentoo >sys-apps/sandbox: 2.20::gentoo >sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo >sys-devel/automake: 1.16.2::gentoo >sys-devel/binutils: 2.34-r2::gentoo >sys-devel/gcc: 10.2.0-r1::gentoo >sys-devel/gcc-config: 2.3.2::gentoo >sys-devel/libtool: 2.4.6-r6::gentoo >sys-devel/make: 4.3::gentoo >sys-kernel/linux-headers: 5.8::gentoo (virtual/os-headers) >sys-libs/glibc: 2.32-r1::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > sync-rsync-verify-max-age: 24 > sync-rsync-verify-jobs: 1 > sync-rsync-verify-metamanifest: yes > sync-rsync-extra-opts: > >ACCEPT_KEYWORDS="amd64 ~amd64" >ACCEPT_LICENSE="* GPL-2" >CBUILD="x86_64-pc-linux-gnu" >CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >DISTDIR="/var/tmp/portage/dev-lang/gdl-0.9.6-r3/distdir" >EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -b -k" >ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" >FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >GENTOO_MIRRORS="http://distfiles.gentoo.org" >LANG="C.UTF-8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" >MAKEOPTS="-j16 V=1" >PKGDIR="/root/.packages" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >USE="acl amd64 berkdb bzip2 cli crypt dri eigen elogind fortran gdbm iconv imagemagick ipv6 jumbo-build libglvnd libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" PYTHON_TARGETS="python2_7" USERLAND="GNU" >Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS > > > >>>> Unpacking source... >>>> Unpacking gdl-0.9.6v2.tgz to /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work >>>> Source unpacked in /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work >>>> Preparing source in /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6 ... > * Regenerating grammar >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 >ANTLR Parser Generator Version 2.7.7 (2006-11-01) 1989-2005 > * Applying 0.9.2-include.patch ... > [ ok ] > * Applying 0.9.5-antlr.patch ... > [ ok ] > * Applying 0.9.5-png.patch ... > [ ok ] > * Applying 0.9.6-fix-file-move.patch ... > [ ok ] > * Applying 0.9.6-fix-python-function-call.patch ... > [ ok ] > * Applying 0.9.6-fun-fix.patch ... > [ ok ] > * Applying 0.9.6-python-use-path-and-startup.patch ... > [ ok ] > * Applying 0.9.6-disable-tests-hanging-under-xvfb-run.patch ... > [ ok ] > * Applying 0.9.6-gcc6.patch ... > [ ok ] > * Applying 0.9.6-formats.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6 ... >>>> Working in BUILD_DIR: "/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build" >cmake --no-warn-unused-cli -C /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build/gentoo_common_config.cmake -G Unix Makefiles -DCMAKE_INSTALL_PREFIX=/usr -DMPICH=OFF -DBUNDLED_ANTLR=OFF -DX11=ON -DEIGEN3=yes -DFFTW=no -DGRIB=OFF -DGSHHS=no -DHDF=no -DHDF5=no -DLIBPROJ4=no -DNETCDF=no -DOPENMP=yes -DPNGLIB=no -DPSLIB=no -DUDUNITS=no -DWXWIDGETS=no -DGRAPHICSMAGICK=OFF -DMAGICK=ON -DPYTHON_MODULE=OFF -DPYTHON=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_INSTALL_DO_STRIP=OFF -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build/gentoo_toolchain.cmake /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6 >Not searching for unused variables given on the command line. >loading initial cache file /var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build/gentoo_common_config.cmake >-- The C compiler identification is GNU 10.2.0 >-- The CXX compiler identification is GNU 10.2.0 >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped >-- Detecting C compile features >-- Detecting C compile features - done >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - skipped >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "1.7.3") >-- Looking for dlopen in dl >-- Looking for dlopen in dl - found >-- Looking for malloc_zone_statistics >-- Looking for malloc_zone_statistics - not found >-- Looking for sbrk >-- Looking for sbrk - found >-- Looking for mallinfo >-- Looking for mallinfo - found >-- Looking for malloc.h >-- Looking for malloc.h - found >-- Looking for malloc/malloc.h >-- Looking for malloc/malloc.h - not found >-- Looking for locale.h >-- Looking for locale.h - found >-- Looking for stdint.h >-- Looking for stdint.h - found >-- Looking for stdlib.h >-- Looking for stdlib.h - found >-- Looking for string.h >-- Looking for string.h - found >-- Looking for strings.h >-- Looking for strings.h - found >-- Looking for sys/stat.h >-- Looking for sys/stat.h - found >-- Looking for sys/types.h >-- Looking for sys/types.h - found >-- Looking for unistd.h >-- Looking for unistd.h - found >-- Performing Test REALLY_HAVE_EXT_STDIO_FILEBUF_H >-- Performing Test REALLY_HAVE_EXT_STDIO_FILEBUF_H - Success >-- INFO: will use GNU extensions for STDIO (useful for compressed I/O) since it seems accepted by your c++ compiler. >-- Looking for dlfcn.h >-- Looking for dlfcn.h - found >-- Looking for inttypes.h >-- Looking for inttypes.h - found >-- Looking for nexttoward in m >-- Looking for nexttoward in m - found >-- Looking for mpi.h >-- Looking for mpi.h - not found >-- Looking for cbreak in /usr/lib64/libncurses.so >-- Looking for cbreak in /usr/lib64/libncurses.so - not found >-- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so >-- Looking for rl_get_screen_size in /usr/lib64/libreadline.so;/usr/lib64/libhistory.so - found >CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:273 (message): > The package name passed to `find_package_handle_standard_args` (PLPLOT) > does not match the name of the calling package (Plplot). This can lead to > problems in calling code that expects `find_package` result variables > (e.g., `_FOUND`) to follow a certain pattern. >Call Stack (most recent call first): > CMakeModules/FindPlplot.cmake:25 (find_package_handle_standard_args) > CMakeLists.txt:354 (find_package) >This warning is for project developers. Use -Wno-dev to suppress it. > >-- Could NOT find PLPLOT (missing: PLPLOT_LIBRARIES) >CMake Error at CMakeLists.txt:360 (message): > plplot library is required but was not found. > > Use -DPLPLOTDIR=DIR to specify the plplot directory tree. > > (suitable Debian/Ubuntu packages: libplplot-dev, > [plplot9-driver-xwin])(suitable Fedora package: plplot-devel) > > >-- Configuring incomplete, errors occurred! >See also "/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build/CMakeFiles/CMakeOutput.log". >See also "/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build/CMakeFiles/CMakeError.log". > * ERROR: dev-lang/gdl-0.9.6-r3::gentoo failed (configure phase): > * cmake failed > * > * Call stack: > * ebuild.sh, line 125: Called src_configure > * environment, line 4109: Called configuration '-DPYTHON_MODULE=OFF' '-DPYTHON=OFF' > * environment, line 4107: Called cmake-utils_src_configure > * environment, line 1415: Called die > * The specific snippet of code: > * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; > * > * If you need support, post the output of `emerge --info '=dev-lang/gdl-0.9.6-r3::gentoo'`, > * the complete build log and the output of `emerge -pqv '=dev-lang/gdl-0.9.6-r3::gentoo'`. > * The complete build log is located at '/var/log/emerge-log/build/dev-lang/gdl-0.9.6-r3:20200908-035158.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-lang/gdl-0.9.6-r3/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/dev-lang/gdl-0.9.6-r3/temp/environment'. > * Working directory: '/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6_build' > * S: '/var/tmp/portage/dev-lang/gdl-0.9.6-r3/work/gdl-0.9.6'
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