* Package: sci-libs/cifparse-obj-7.105 * Repository: gentoo * Maintainer: sci-chemistry@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox @@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; This ebuild was merged at the following commit: https://github.com/gentoo-mirror/gentoo/commit/13867c233a1cc4cbbc4ef6e070ed68d0fb7575ca @@@@@ END @@@@@ >>> Unpacking source... >>> Unpacking cifparse-obj-v7.105-prod-src.tar.gz to /var/tmp/portage/sci-libs/cifparse-obj-7.105/work >>> Source unpacked in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work >>> Preparing source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... * Applying cifparse-obj-7.105-makefile.patch ... [ ok ] * Applying cifparse-obj-7.025-gcc5_6.patch ... [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... make -j2 V=1 -j1 'C_OPT=-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color' 'CXX_OPT=-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color' ------------------------------------------------------------ **** Making etc **** ------------------------------------------------------------ ./platform.sh: line 70: gcc: command not found ./platform.sh: line 74: gcc: command not found ./platform.sh: line 78: gcc: command not found Warning: this seems to be an unsupported operating system. Supported systems are: SunOS ...... version 4.1.x and 5.2 or higher Linux ...... any version SGI IRIX ... version 5.3-6.4 ------------------------------------------------------------ **** Making common **** ------------------------------------------------------------ make[1]: Entering directory '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src/common' c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o make[1]: c: No such file or directory make[1]: [Makefile:154: RcsbPlatform.o] Error 127 (ignored) c src/RcsbFile.C -o ./obj/RcsbFile.o make[1]: c: No such file or directory make[1]: [Makefile:154: RcsbFile.o] Error 127 (ignored) c src/BlockIO.C -o ./obj/BlockIO.o make[1]: c: No such file or directory make[1]: [Makefile:154: BlockIO.o] Error 127 (ignored) c src/Serializer.C -o ./obj/Serializer.o make[1]: c: No such file or directory make[1]: [Makefile:154: Serializer.o] Error 127 (ignored) c src/GenString.C -o ./obj/GenString.o make[1]: c: No such file or directory make[1]: [Makefile:154: GenString.o] Error 127 (ignored) c src/CifString.C -o ./obj/CifString.o make[1]: c: No such file or directory make[1]: [Makefile:154: CifString.o] Error 127 (ignored) c src/GenCont.C -o ./obj/GenCont.o make[1]: c: No such file or directory make[1]: [Makefile:154: GenCont.o] Error 127 (ignored) c src/Exceptions.C -o ./obj/Exceptions.o make[1]: c: No such file or directory make[1]: [Makefile:154: Exceptions.o] Error 127 (ignored) c src/DataInfo.C -o ./obj/DataInfo.o make[1]: c: No such file or directory make[1]: [Makefile:154: DataInfo.o] Error 127 (ignored) c src/mapped_vector.C -o ./obj/mapped_vector.o make[1]: c: No such file or directory make[1]: [Makefile:154: mapped_vector.o] Error 127 (ignored) c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o make[1]: c: No such file or directory make[1]: [Makefile:154: mapped_ptr_vector.o] Error 127 (ignored) llvm-ar: error: unknown option . OVERVIEW: LLVM Archiver USAGE: llvm-ar [options] [-][modifiers] [relpos] [count] [files] llvm-ar -M [ - ignored for compatibility -h --help - display this help and exit --version - print the version and exit @ - read options from OPERATIONS: d - delete [files] from the archive m - move [files] in the archive p - print [files] found in the archive q - quick append [files] to the archive r - replace or insert [files] into the archive s - act as ranlib t - display contents of archive x - extract [files] from the archive MODIFIERS: [a] - put [files] after [relpos] [b] - put [files] before [relpos] (same as [i]) [c] - do not warn if archive had to be created [D] - use zero for timestamps and uids/gids (default) [h] - display this help and exit [i] - put [files] before [relpos] (same as [b]) [l] - ignored for compatibility [L] - add archive's contents [N] - use instance [count] of name [o] - preserve original dates [O] - display member offsets [P] - use full names when matching (implied for thin archives) [s] - create an archive index (cf. ranlib) [S] - do not build a symbol table [T] - create a thin archive [u] - update only [files] newer than archive contents [U] - use actual timestamps and uids/gids [v] - be verbose about actions taken [V] - display the version and exit make[1]: *** [Makefile:147: lib/common.a] Error 1 make[1]: Leaving directory '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src/common' make: *** [Makefile:30: compile] Error 1 * ERROR: sci-libs/cifparse-obj-7.105::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-libs/cifparse-obj-7.105::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/cifparse-obj-7.105::gentoo'`. * The complete build log is located at '/var/log/emerge-log/build/sci-libs/cifparse-obj-7.105:20200709-005408.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/cifparse-obj-7.105/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/cifparse-obj-7.105/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src' * S: '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src' emerge --info: Portage 2.3.103 (python 3.7.8-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r5, 5.4.0-1015-aws x86_64) ================================================================= System uname: Linux-5.4.0-1015-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7 KiB Mem: 7895548 total, 2137588 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Thu, 09 Jul 2020 10:35:22 +0000 sh bash 5.0_p17 ld GNU ld (Gentoo 2.34 p4) 2.34.0 app-shells/bash: 5.0_p17::gentoo dev-lang/perl: 5.30.3-r2::gentoo dev-lang/python: 2.7.18::gentoo, 3.7.8-r1::gentoo, 3.8.3-r1::gentoo, 3.9.0_beta4::gentoo dev-util/cmake: 3.18.0_rc3::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/openrc: 0.42.1::gentoo sys-apps/sandbox: 2.20::gentoo sys-devel/autoconf: 2.69-r5::gentoo sys-devel/automake: 1.16.2::gentoo sys-devel/binutils: 2.34-r1::gentoo sys-devel/gcc: 10.1.0-r2::gentoo sys-devel/gcc-config: 2.3.1::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.7::gentoo (virtual/os-headers) sys-libs/glibc: 2.31-r5::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-max-age: 24 sync-rsync-verify-jobs: 1 sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CC="x86_64-pc-linux-gnu-clang" CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXX="x86_64-pc-linux-gnu-clang++" CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--with-bdeps=y --binpkg-respect-use=y -1 -b -k" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="C.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0" MAKEOPTS="-j2 V=1" PKGDIR="/root/.packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS