* Package:    sci-biology/glimmer-3.02b
 * Repository: gentoo
 * Maintainer: sci-biology@gentoo.org
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox


@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@
This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix;
This ebuild was merged at the following commit:
https://github.com/gentoo-mirror/gentoo/commit/deaaa519367448538a3a047f9ef4a2cb6b44a28d
@@@@@ END @@@@@

>>> Unpacking source...
>>> Unpacking glimmer302b.tar.gz to /var/tmp/portage/sci-biology/glimmer-3.02b/work
>>> Source unpacked in /var/tmp/portage/sci-biology/glimmer-3.02b/work
>>> Preparing source in /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02 ...
 * Applying glimmer-3.02b-jobserver-fix.patch ...
 [ ok ]
 * Applying glimmer-3.02b-ldflags.patch ...
 [ ok ]
 * Applying glimmer-3.02b-rename_extract.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02 ...
make -j2 V=1 -C src CC=x86_64-pc-linux-gnu-clang CXX=x86_64-pc-linux-gnu-clang++ AR=llvm-ar 'CXXFLAGS=-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color' 'CFLAGS=-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color' 'LDFLAGS=-Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0' 
make: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src'
* Make Target is  all
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
if [ -e gene.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc gene.cc \
    | sed '\''s/gene\\.o[ :]*/& gene.d/g'\'' > gene.d' ; \
        fi ;
if [ -e fasta.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc fasta.cc \
    | sed '\''s/fasta\\.o[ :]*/& fasta.d/g'\'' > fasta.d' ; \
        fi ;
if [ -e delcher.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc delcher.cc \
    | sed '\''s/delcher\\.o[ :]*/& delcher.d/g'\'' > delcher.d' ; \
        fi ;
@@@@@@@@@@@@@@@@@@@  delcher.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e delcher.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/delcher.o delcher.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" delcher.o ; \
fi ;
@@@@@@@@@@@@@@@@@@@  fasta.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e fasta.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/fasta.o fasta.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" fasta.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  gene.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e gene.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/gene.o gene.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" gene.o ; \
fi ;
1 warning generated.
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
###################  libGLMcommon.a #####################
llvm-ar: warning: creating /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
if [ -e score-fixed.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc score-fixed.cc \
    | sed '\''s/score-fixed\\.o[ :]*/& score-fixed.d/g'\'' > score-fixed.d' ; \
        fi ;
if [ -e build-fixed.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc build-fixed.cc \
    | sed '\''s/build-fixed\\.o[ :]*/& build-fixed.d/g'\'' > build-fixed.d' ; \
        fi ;
if [ -e build-icm.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc build-icm.cc \
    | sed '\''s/build-icm\\.o[ :]*/& build-icm.d/g'\'' > build-icm.d' ; \
        fi ;
if [ -e icm.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc icm.cc \
    | sed '\''s/icm\\.o[ :]*/& icm.d/g'\'' > icm.d' ; \
        fi ;
@@@@@@@@@@@@@@@@@@@  icm.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e icm.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/icm.o icm.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" icm.o ; \
fi ;
@@@@@@@@@@@@@@@@@@@  build-icm.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e build-icm.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o build-icm.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" build-icm.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  build-fixed.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e build-fixed.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o build-fixed.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" build-fixed.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  score-fixed.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e score-fixed.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o score-fixed.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" score-fixed.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
1 warning generated.
###################  libGLMicm.a #####################
llvm-ar: warning: creating /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a
++++++++++++++++++++  build-icm ++++++++++++++++++++++
if [ -z "build-icm.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
fi ;
++++++++++++++++++++  build-fixed ++++++++++++++++++++++
if [ -z "build-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: build-icm.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  score-fixed ++++++++++++++++++++++
if [ -z "score-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lGLMicm -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: build-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: score-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
if [ -e test.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc test.cc \
    | sed '\''s/test\\.o[ :]*/& test.d/g'\'' > test.d' ; \
        fi ;
if [ -e long-orfs.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc long-orfs.cc \
    | sed '\''s/long-orfs\\.o[ :]*/& long-orfs.d/g'\'' > long-orfs.d' ; \
        fi ;
if [ -e glimmer3.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc glimmer3.cc \
    | sed '\''s/glimmer3\\.o[ :]*/& glimmer3.d/g'\'' > glimmer3.d' ; \
        fi ;
if [ -e anomaly.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc anomaly.cc \
    | sed '\''s/anomaly\\.o[ :]*/& anomaly.d/g'\'' > anomaly.d' ; \
        fi ;
@@@@@@@@@@@@@@@@@@@  anomaly.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e anomaly.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o anomaly.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" anomaly.o ; \
fi ;
@@@@@@@@@@@@@@@@@@@  glimmer3.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e glimmer3.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o glimmer3.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" glimmer3.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  long-orfs.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e long-orfs.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o long-orfs.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" long-orfs.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  test.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e test.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o test.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" test.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
++++++++++++++++++++  anomaly ++++++++++++++++++++++
if [ -z "anomaly.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: anomaly.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  long-orfs ++++++++++++++++++++++
if [ -z "long-orfs.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: long-orfs.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  test ++++++++++++++++++++++
if [ -z "test.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: test.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
1 warning generated.
++++++++++++++++++++  glimmer3 ++++++++++++++++++++++
if [ -z "glimmer3.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: glimmer3.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
if [ -e window-acgt.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc window-acgt.cc \
    | sed '\''s/window-acgt\\.o[ :]*/& window-acgt.d/g'\'' > window-acgt.d' ; \
        fi ;
if [ -e uncovered.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc uncovered.cc \
    | sed '\''s/uncovered\\.o[ :]*/& uncovered.d/g'\'' > uncovered.d' ; \
        fi ;
if [ -e start-codon-distrib.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc start-codon-distrib.cc \
    | sed '\''s/start-codon-distrib\\.o[ :]*/& start-codon-distrib.d/g'\'' > start-codon-distrib.d' ; \
        fi ;
if [ -e multi-extract.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc multi-extract.cc \
    | sed '\''s/multi-extract\\.o[ :]*/& multi-extract.d/g'\'' > multi-extract.d' ; \
        fi ;
if [ -e extract.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc extract.cc \
    | sed '\''s/extract\\.o[ :]*/& extract.d/g'\'' > extract.d' ; \
        fi ;
if [ -e entropy-score.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc entropy-score.cc \
    | sed '\''s/entropy-score\\.o[ :]*/& entropy-score.d/g'\'' > entropy-score.d' ; \
        fi ;
if [ -e entropy-profile.cc ] ; then \
  /bin/sh -ec 'x86_64-pc-linux-gnu-clang++ -M   -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc entropy-profile.cc \
    | sed '\''s/entropy-profile\\.o[ :]*/& entropy-profile.d/g'\'' > entropy-profile.d' ; \
        fi ;
@@@@@@@@@@@@@@@@@@@  entropy-profile.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e entropy-profile.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o entropy-profile.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" entropy-profile.o ; \
fi ;
@@@@@@@@@@@@@@@@@@@  entropy-score.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e entropy-score.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o entropy-score.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" entropy-score.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
entropy-score.cc:157:33: warning: if statement has empty body [-Wempty-body]
      if  (line [n - 1] == '\n');
                                ^
entropy-score.cc:157:33: note: put the semicolon on a separate line to silence
      this warning
1 warning generated.
@@@@@@@@@@@@@@@@@@@  extract.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e extract.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o extract.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" extract.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
2 warnings generated.
@@@@@@@@@@@@@@@@@@@  multi-extract.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e multi-extract.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o multi-extract.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" multi-extract.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  start-codon-distrib.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e start-codon-distrib.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o start-codon-distrib.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" start-codon-distrib.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  uncovered.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e uncovered.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o uncovered.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" uncovered.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
@@@@@@@@@@@@@@@@@@@  window-acgt.cc @@@@@@@@@@@@@@@@@@@@@
if [ -e window-acgt.cc ] ; then \
  x86_64-pc-linux-gnu-clang++  -D__cplusplus -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -c \
	 -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc  -I/../SYS/inc  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util  -I/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/inc -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o window-acgt.cc ; \
else \
  /cm/cmtools/bin/links.pl /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj \
            " :/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj" window-acgt.o ; \
fi ;
In file included from <built-in>:411:
<command line>:1:9: warning: '__cplusplus' macro redefined [-Wmacro-redefined]
#define __cplusplus 1
        ^
<built-in>:407:9: note: previous definition is here
#define __cplusplus 201402L
        ^
1 warning generated.
++++++++++++++++++++  entropy-profile ++++++++++++++++++++++
if [ -z "entropy-profile.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: entropy-profile.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  entropy-score ++++++++++++++++++++++
if [ -z "entropy-score.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: entropy-score.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  glimmer_extract ++++++++++++++++++++++
if [ -z "extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: extract.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  multi-extract ++++++++++++++++++++++
if [ -z "multi-extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: multi-extract.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  start-codon-distrib ++++++++++++++++++++++
if [ -z "start-codon-distrib.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
fi ;
1 warning generated.
++++++++++++++++++++  uncovered ++++++++++++++++++++++
if [ -z "uncovered.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: start-codon-distrib.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: uncovered.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
++++++++++++++++++++  window-acgt ++++++++++++++++++++++
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
if [ -z "window-acgt.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: window-acgt.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
* Make Target is  all
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
++++++++++++++++++++  build-icm ++++++++++++++++++++++
if [ -z "build-icm.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
fi ;
++++++++++++++++++++  build-fixed ++++++++++++++++++++++
if [ -z "build-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  score-fixed ++++++++++++++++++++++
if [ -z "score-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
++++++++++++++++++++  anomaly ++++++++++++++++++++++
if [ -z "anomaly.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
fi ;
++++++++++++++++++++  glimmer3 ++++++++++++++++++++++
if [ -z "glimmer3.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  long-orfs ++++++++++++++++++++++
if [ -z "long-orfs.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
fi ;
++++++++++++++++++++  test ++++++++++++++++++++++
if [ -z "test.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
++++++++++++++++++++  entropy-profile ++++++++++++++++++++++
if [ -z "entropy-profile.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
fi ;
++++++++++++++++++++  entropy-score ++++++++++++++++++++++
if [ -z "entropy-score.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  glimmer_extract ++++++++++++++++++++++
if [ -z "extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
fi ;
++++++++++++++++++++  multi-extract ++++++++++++++++++++++
if [ -z "multi-extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o is incompatible with elf_x86_64
++++++++++++++++++++  start-codon-distrib ++++++++++++++++++++++
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
if [ -z "start-codon-distrib.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  uncovered ++++++++++++++++++++++
if [ -z "uncovered.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  window-acgt ++++++++++++++++++++++
if [ -z "window-acgt.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
* Make Target is  all
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
make[1]: Nothing to be done for 'all'.
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Common'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
++++++++++++++++++++  build-icm ++++++++++++++++++++++
if [ -z "build-icm.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-icm; fi; \
fi ;
++++++++++++++++++++  build-fixed ++++++++++++++++++++++
if [ -z "build-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/build-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-icm.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  score-fixed ++++++++++++++++++++++
if [ -z "score-fixed.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/score-fixed; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/build-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/score-fixed.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/ICM'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
++++++++++++++++++++  anomaly ++++++++++++++++++++++
if [ -z "anomaly.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/anomaly; fi; \
fi ;
++++++++++++++++++++  glimmer3 ++++++++++++++++++++++
if [ -z "glimmer3.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3 -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMicm.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer3; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/anomaly.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/glimmer3.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  long-orfs ++++++++++++++++++++++
if [ -z "long-orfs.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/long-orfs; fi; \
fi ;
++++++++++++++++++++  test ++++++++++++++++++++++
if [ -z "test.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/test; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/long-orfs.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/test.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Glimmer'
#####    Making Directory  /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util   all  #####
make[1]: Entering directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
++++++++++++++++++++  entropy-profile ++++++++++++++++++++++
if [ -z "entropy-profile.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-profile; fi; \
fi ;
++++++++++++++++++++  entropy-score ++++++++++++++++++++++
if [ -z "entropy-score.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/entropy-score; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-profile.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/entropy-score.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  glimmer_extract ++++++++++++++++++++++
if [ -z "extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/glimmer_extract; fi; \
fi ;
++++++++++++++++++++  multi-extract ++++++++++++++++++++++
if [ -z "multi-extract.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/multi-extract; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/extract.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/multi-extract.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  start-codon-distrib ++++++++++++++++++++++
if [ -z "start-codon-distrib.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/start-codon-distrib; fi; \
fi ;
++++++++++++++++++++  uncovered ++++++++++++++++++++++
if [ -z "uncovered.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/uncovered; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/start-codon-distrib.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/uncovered.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
++++++++++++++++++++  window-acgt ++++++++++++++++++++++
if [ -z "window-acgt.o" ] ; then \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
else \
  cd /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj; \
    if x86_64-pc-linux-gnu-clang++ -o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 \
                -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib  -L/usr/lib  -L/usr/shlib  -L/usr/X11R6/lib  -L/lib /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/lib/libGLMcommon.a \
        -lm ; then \
		true; else rm -f /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/bin/window-acgt; fi; \
fi ;
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crt1.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbegin.o is incompatible with elf_x86_64
ld.lld: error: /var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/obj/window-acgt.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtend.o is incompatible with elf_x86_64
ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64
clang-10: error: linker command failed with exit code 1 (use -v to see invocation)
make[1]: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src/Util'
make: Leaving directory '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02/src'
>>> Source compiled.
>>> Test phase [not enabled]: sci-biology/glimmer-3.02b

>>> Install sci-biology/glimmer-3.02b into /var/tmp/portage/sci-biology/glimmer-3.02b/image/
rm: cannot remove 'bin/test': No such file or directory
 * ERROR: sci-biology/glimmer-3.02b::gentoo failed (install phase):
 *   (no error message)
 * 
 * Call stack:
 *     ebuild.sh, line 125:  Called src_install
 *   environment, line 1908:  Called die
 * The specific snippet of code:
 *       rm bin/test || die;
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/glimmer-3.02b::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/glimmer-3.02b::gentoo'`.
 * The complete build log is located at '/var/log/emerge-log/build/sci-biology/glimmer-3.02b:20200708-161353.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/glimmer-3.02b/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/glimmer-3.02b/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02'
 * S: '/var/tmp/portage/sci-biology/glimmer-3.02b/work/glimmer3.02'



emerge --info:
Portage 2.3.103 (python 3.7.8-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r5, 5.4.0-1015-aws x86_64)
=================================================================
System uname: Linux-5.4.0-1015-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7
KiB Mem:     7895548 total,   2137588 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Thu, 09 Jul 2020 10:35:22 +0000
sh bash 5.0_p17
ld GNU ld (Gentoo 2.34 p4) 2.34.0
app-shells/bash:          5.0_p17::gentoo
dev-lang/perl:            5.30.3-r2::gentoo
dev-lang/python:          2.7.18::gentoo, 3.7.8-r1::gentoo, 3.8.3-r1::gentoo, 3.9.0_beta4::gentoo
dev-util/cmake:           3.18.0_rc3::gentoo
sys-apps/baselayout:      2.7::gentoo
sys-apps/openrc:          0.42.1::gentoo
sys-apps/sandbox:         2.20::gentoo
sys-devel/autoconf:       2.69-r5::gentoo
sys-devel/automake:       1.16.2::gentoo
sys-devel/binutils:       2.34-r1::gentoo
sys-devel/gcc:            10.1.0-r2::gentoo
sys-devel/gcc-config:     2.3.1::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.3::gentoo
sys-kernel/linux-headers: 5.7::gentoo (virtual/os-headers)
sys-libs/glibc:           2.31-r5::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts: 

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CC="x86_64-pc-linux-gnu-clang"
CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXX="x86_64-pc-linux-gnu-clang++"
CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps=y --binpkg-respect-use=y -1 -b -k"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="C.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0"
MAKEOPTS="-j2 V=1"
PKGDIR="/root/.packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS