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Gentoo's Bugzilla – Attachment 647290 Details for
Bug 730328
dev-python/pyode fails to compile
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build.log
build.log (text/plain), 18.08 KB, created by
Agostino Sarubbo
on 2020-07-01 09:15:04 UTC
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Description:
build.log
Filename:
MIME Type:
Creator:
Agostino Sarubbo
Created:
2020-07-01 09:15:04 UTC
Size:
18.08 KB
patch
obsolete
> * Package: dev-python/pyode-1.2.0_p20100322-r1 > * Repository: gentoo > * Maintainer: python@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux python_targets_python2_7 userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox > > >@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@ >This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix; >This ebuild was merged at the following commit: >https://github.com/gentoo-mirror/gentoo/commit/bfcb7a6ed0c5c041f0dbbbbdae277b0aeb429b8c >@@@@@ END @@@@@ > >>>> Unpacking source... >>>> Unpacking PyODE-snapshot-2010-03-22.tar.bz2 to /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work >>>> Source unpacked in /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work >>>> Preparing source in /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22 ... >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22 ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22 ... > * python2_7: running distutils-r1_run_phase python_compile > * DISTUTILS_USE_SETUPTOOLS value is probably incorrect > * value: DISTUTILS_USE_SETUPTOOLS=bdepend (default?) > * expected: DISTUTILS_USE_SETUPTOOLS=no >python2.7 setup.py build >/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22/src/mass.pyx:263:18: Warning: 'not None' will become the default in a future version of Pyrex. Use 'or None' to allow passing None. >/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22/src/mass.pyx:263:18: Warning: 'not None' will become the default in a future version of Pyrex. Use 'or None' to allow passing None. >INFO: <ode/ode.h> found in /usr/include >INFO: Creating ode_trimesh.c >pyrexc -o ode_trimesh.c -I. -Isrc src/ode.pyx >INFO: Creating ode_notrimesh.c >pyrexc -o ode_notrimesh.c -I. -Isrc src/ode.pyx >INFO: Installing with trimesh support. >running build >running build_py >creating /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/__init__.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/transform.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/parser.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/node.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/geom.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/body.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/errors.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >copying xode/joint.py -> /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/xode >warning: build_py: byte-compiling is disabled, skipping. > >running build_ext >building 'ode' extension >creating /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/temp.linux-x86_64-2.7 >x86_64-pc-linux-gnu-clang -fno-strict-aliasing -O2 -pipe -march=native -frecord-gcc-switches -fwrapv -DNDEBUG -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -fno-strict-aliasing -fPIC -I/usr/include -I/usr/local/include -I/opt/local/include -I/usr/include/python2.7 -c ode_trimesh.c -o /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/temp.linux-x86_64-2.7/ode_trimesh.o -I/usr/include >ode_trimesh.c:907:3: warning: 'dMassSetCappedCylinder' is deprecated [-Wdeprecated-declarations] > dMassSetCappedCylinder((&((struct __pyx_obj_3ode_Mass *)__pyx_v_self)->_mass),__pyx_1,__pyx_2,__pyx_3,__pyx_4); > ^ >/usr/include/ode/mass.h:84:9: note: 'dMassSetCappedCylinder' has been explicitly marked deprecated here >ODE_API ODE_API_DEPRECATED void dMassSetCappedCylinder(dMass *a, dReal b, int c, dReal d, dReal e); > ^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:946:3: warning: 'dMassSetCappedCylinderTotal' is deprecated [-Wdeprecated-declarations] > dMassSetCappedCylinderTotal((&((struct __pyx_obj_3ode_Mass *)__pyx_v_self)->_mass),__pyx_1,__pyx_2,__pyx_3,__pyx_4); > ^ >/usr/include/ode/mass.h:85:9: note: 'dMassSetCappedCylinderTotal' has been explicitly marked deprecated here >ODE_API ODE_API_DEPRECATED void dMassSetCappedCylinderTotal(dMass *a, dReal b, int c, dReal d, dReal e); > ^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13433:75: warning: 'dCreateGeomTransform' is deprecated [-Wdeprecated-declarations] > ((struct __pyx_obj_3ode_GeomTransform *)__pyx_v_self)->__pyx_base.gid = dCreateGeomTransform(__pyx_v_sid); > ^ >/usr/include/ode/collision.h:1089:1: note: 'dCreateGeomTransform' has been explicitly marked deprecated here >ODE_API_DEPRECATED ODE_API dGeomID dCreateGeomTransform (dSpaceID space); >^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13436:3: warning: 'dGeomTransformSetCleanup' is deprecated [-Wdeprecated-declarations] > dGeomTransformSetCleanup(((struct __pyx_obj_3ode_GeomTransform *)__pyx_v_self)->__pyx_base.gid,0); > ^ >/usr/include/ode/collision.h:1092:1: note: 'dGeomTransformSetCleanup' has been explicitly marked deprecated here >ODE_API_DEPRECATED ODE_API void dGeomTransformSetCleanup (dGeomID g, int mode); >^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13606:3: warning: 'dGeomTransformSetGeom' is deprecated [-Wdeprecated-declarations] > dGeomTransformSetGeom(((struct __pyx_obj_3ode_GeomTransform *)__pyx_v_self)->__pyx_base.gid,((dGeomID)__pyx_v_id)); > ^ >/usr/include/ode/collision.h:1090:1: note: 'dGeomTransformSetGeom' has been explicitly marked deprecated here >ODE_API_DEPRECATED ODE_API void dGeomTransformSetGeom (dGeomID g, dGeomID obj); >^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13672:3: warning: 'dGeomTransformSetInfo' is deprecated [-Wdeprecated-declarations] > dGeomTransformSetInfo(((struct __pyx_obj_3ode_GeomTransform *)__pyx_v_self)->__pyx_base.gid,__pyx_v_mode); > ^ >/usr/include/ode/collision.h:1094:1: note: 'dGeomTransformSetInfo' has been explicitly marked deprecated here >ODE_API_DEPRECATED ODE_API void dGeomTransformSetInfo (dGeomID g, int mode); >^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13694:28: warning: 'dGeomTransformGetInfo' is deprecated [-Wdeprecated-declarations] > __pyx_1 = PyInt_FromLong(dGeomTransformGetInfo(((struct __pyx_obj_3ode_GeomTransform *)__pyx_v_self)->__pyx_base.gid)); if (!__pyx_1) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 521; goto __pyx_L1;} > ^ >/usr/include/ode/collision.h:1095:1: note: 'dGeomTransformGetInfo' has been explicitly marked deprecated here >ODE_API_DEPRECATED ODE_API int dGeomTransformGetInfo (dGeomID g); >^ >/usr/include/ode/odeconfig.h:60:45: note: expanded from macro 'ODE_API_DEPRECATED' ># define ODE_API_DEPRECATED __attribute__((__deprecated__)) > ^ >ode_trimesh.c:13931:174: warning: passing 'int *' to parameter of type 'const dTriIndex *' (aka 'const unsigned int *') converts between pointers to integer types with different sign [-Wpointer-sign] > dGeomTriMeshDataBuildSimple(((struct __pyx_obj_3ode_TriMeshData *)__pyx_v_self)->tmdid,((struct __pyx_obj_3ode_TriMeshData *)__pyx_v_self)->vertex_buffer,__pyx_v_numverts,((struct __pyx_obj_3ode_TriMeshData *)__pyx_v_self)->face_buffer,(__pyx_v_numfaces * 3)); > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >/usr/include/ode/collision_trimesh.h:98:51: note: passing argument to parameter 'Indices' here > const dTriIndex* Indices, int IndexCount); > ^ >8 warnings generated. >x86_64-pc-linux-gnu-clang -shared -Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color -fno-strict-aliasing /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/temp.linux-x86_64-2.7/ode_trimesh.o -L/usr/lib -L/usr/local/lib -L/opt/local/lib -L/usr/lib64 -lode -lstdc++ -lpython2.7 -o /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/lib/ode.so -L/usr/lib64 -lode >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crti.o is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtbeginS.o is incompatible with elf_x86_64 >ld.lld: error: /var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22-python2_7/temp.linux-x86_64-2.7/ode_trimesh.o is incompatible with elf_x86_64 >ld.lld: error: /usr/lib64/libode.so is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libstdc++.so is incompatible with elf_x86_64 >ld.lld: error: /usr/lib64/libpython2.7.so is incompatible with elf_x86_64 >ld.lld: error: /usr/lib64/libode.so is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/libgcc_s.so.1 is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/crtendS.o is incompatible with elf_x86_64 >ld.lld: error: /usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64/crtn.o is incompatible with elf_x86_64 >clang-10: error: linker command failed with exit code 1 (use -v to see invocation) >error: command 'x86_64-pc-linux-gnu-clang' failed with exit status 1 > * ERROR: dev-python/pyode-1.2.0_p20100322-r1::gentoo failed (compile phase): > * (no error message) > * > * Call stack: > * ebuild.sh, line 125: Called src_compile > * environment, line 3713: Called distutils-r1_src_compile > * environment, line 1184: Called _distutils-r1_run_foreach_impl 'python_compile' > * environment, line 377: Called python_foreach_impl 'distutils-r1_run_phase' 'python_compile' > * environment, line 3348: Called multibuild_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > * environment, line 2631: Called _multibuild_run '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile' > * environment, line 2629: Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile' > * environment, line 828: Called distutils-r1_run_phase 'python_compile' > * environment, line 1177: Called python_compile > * environment, line 3093: Called distutils-r1_python_compile > * environment, line 1047: Called esetup.py 'build' > * environment, line 1767: Called die > * The specific snippet of code: > * "${@}" || die "${die_args[@]}"; > * > * If you need support, post the output of `emerge --info '=dev-python/pyode-1.2.0_p20100322-r1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=dev-python/pyode-1.2.0_p20100322-r1::gentoo'`. > * The complete build log is located at '/var/log/emerge-log/build/dev-python/pyode-1.2.0_p20100322-r1:20200630-181723.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/temp/environment'. > * Working directory: '/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22' > * S: '/var/tmp/portage/dev-python/pyode-1.2.0_p20100322-r1/work/PyODE-snapshot-2010-03-22' > > > >emerge --info: >Portage 2.3.103 (python 3.7.8-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r5, 5.4.0-1015-aws x86_64) >================================================================= >System uname: Linux-5.4.0-1015-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7 >KiB Mem: 7895548 total, 5239968 free >KiB Swap: 0 total, 0 free >Timestamp of repository gentoo: Wed, 01 Jul 2020 08:39:24 +0000 >sh bash 5.0_p17 >ld GNU ld (Gentoo 2.34 p4) 2.34.0 >app-shells/bash: 5.0_p17::gentoo >dev-lang/perl: 5.30.3-r2::gentoo >dev-lang/python: 2.7.18::gentoo, 3.7.8::gentoo, 3.8.3::gentoo, 3.9.0_beta3::gentoo >dev-util/cmake: 3.18.0_rc2::gentoo >dev-util/pkgconfig: 0.29.2::gentoo >sys-apps/baselayout: 2.7::gentoo >sys-apps/openrc: 0.42.1::gentoo >sys-apps/sandbox: 2.20::gentoo >sys-devel/autoconf: 2.69-r5::gentoo >sys-devel/automake: 1.16.2::gentoo >sys-devel/binutils: 2.34-r1::gentoo >sys-devel/gcc: 10.1.0-r1::gentoo >sys-devel/gcc-config: 2.3.1::gentoo >sys-devel/libtool: 2.4.6-r6::gentoo >sys-devel/make: 4.3::gentoo >sys-kernel/linux-headers: 5.7::gentoo (virtual/os-headers) >sys-libs/glibc: 2.31-r5::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > sync-rsync-extra-opts: > sync-rsync-verify-jobs: 1 > sync-rsync-verify-metamanifest: yes > sync-rsync-verify-max-age: 24 > >ACCEPT_KEYWORDS="amd64 ~amd64" >ACCEPT_LICENSE="*" >CBUILD="x86_64-pc-linux-gnu" >CC="x86_64-pc-linux-gnu-clang" >CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXX="x86_64-pc-linux-gnu-clang++" >CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >DISTDIR="/usr/portage/distfiles" >EMERGE_DEFAULT_OPTS="--with-bdeps=y --binpkg-respect-use=y -1 -b -k" >ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" >FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches -fno-diagnostics-color" >GENTOO_MIRRORS="http://distfiles.gentoo.org" >LANG="C.UTF-8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -fuse-ld=lld -Wl,--defsym=__gentoo_check_ldflags__=0" >MAKEOPTS="-j2 V=1" >PKGDIR="/root/.packages" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" >Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS >
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bug 730328
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