build.log

build.log (text/plain), 37.14 KB, created by Agostino Sarubbo on 2020-06-23 06:09:22 UTC

 * Package:    sci-biology/infernal-1.0.2-r1
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox test userpriv usersandbox


@@@@@ PLEASE PAY ATTENTION HERE!!! @@@@@
This information may help you to understand if this is a duplicate or if this bug exists after you pushed a fix;
This ebuild was merged at the following commit:
https://github.com/gentoo/gentoo/commit/690a65802465e02953abffac08a045c33791a047
@@@@@ END @@@@@

>>> Unpacking source...
>>> Unpacking infernal-1.0.2.tar.gz to /var/tmp/portage/sci-biology/infernal-1.0.2-r1/work
>>> Source unpacked in /var/tmp/portage/sci-biology/infernal-1.0.2-r1/work
>>> Preparing source in /var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2 ...
 * Applying infernal-1.0.2-fix-build-system.patch ...
 [ ok ]
 * Applying infernal-1.0.2-overflows.patch ...
 [ ok ]
 * Applying infernal-1.0.2-perl-5.16-2.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2 ...
 * econf: updating infernal-1.0.2/easel/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating infernal-1.0.2/easel/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating infernal-1.0.2/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating infernal-1.0.2/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/infernal-1.0.2-r1 --htmldir=/usr/share/doc/infernal-1.0.2-r1/html --libdir=/usr/lib64 --disable-mpi
configure: Configuring Infernal for your system.
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
configure: Full Infernal source distribution - using full configuration
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for C compiler vendor... gnu
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C99... none needed
checking for x86_64-pc-linux-gnu-gcc option to accept ISO Standard C... (cached) none needed
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking for ar... /usr/bin/ar
checking whether your make is GNU make... yes, it is.
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking emmintrin.h usability... yes
checking emmintrin.h presence... yes
checking for emmintrin.h... yes
checking if platform can run SSE/SSE2 instructions... yes
checking whether C compiler accepts -msse2... yes
checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdint.h... (cached) yes
checking for inttypes.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for int8_t... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking for off_t... yes
checking for mkstemp... yes
checking for popen... yes
checking for strcasecmp... yes
checking for times... yes
checking for _LARGEFILE_SOURCE value needed for large files... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
configure: creating ./config.status
config.status: creating src/Makefile
config.status: creating testsuite/Makefile
config.status: creating easel/miniapps/Makefile
config.status: creating easel/testsuite/Makefile
config.status: creating easel/Makefile
config.status: creating Makefile
config.status: creating src/config.h
config.status: creating easel/esl_config.h
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2 ...
make -j4 V=1 
make -C easel
make[1]: Entering directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/easel'
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c easel.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_alphabet.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_cluster.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_dirichlet.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_distance.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_dmatrix.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_exponential.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_fileparser.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_gamma.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_getopts.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_gev.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_gumbel.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_histogram.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_hyperexp.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_keyhash.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_minimizer.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_mixgev.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_mpi.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_msa.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_msacluster.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_msashuffle.c		
esl_msa.c: In function ‘esl_msa_CreateFromString’:
esl_msa.c:3617:3: warning: format not a string literal and no format arguments []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat-security-Wformat-security]8;;]
 3617 |   fprintf(fp, s);
      |   ^~~~~~~
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_msaweight.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_normal.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_paml.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_random.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_randomseq.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_ratematrix.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_regexp.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_rootfinder.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_scorematrix.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_sq.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_sqio.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_sse.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_ssi.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_stack.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_stats.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_stopwatch.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_stretchexp.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_swat.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_tree.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_vectorops.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_vmx.c		
esl_tree.c: In function ‘esl_tree_CreateFromString’:
esl_tree.c:152:3: warning: format not a string literal and no format arguments []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wformat-security-Wformat-security]8;;]
  152 |   fprintf(fp, s);
      |   ^~~~~~~
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_weibull.c		
x86_64-pc-linux-gnu-gcc -I. -O2 -pipe -march=native -frecord-gcc-switches -msse2  -c esl_wuss.c		
x86_64-pc-linux-gnu-ar rcv libeasel.a easel.o esl_alphabet.o esl_cluster.o esl_dirichlet.o esl_distance.o esl_dmatrix.o esl_exponential.o esl_fileparser.o esl_gamma.o esl_getopts.o esl_gev.o esl_gumbel.o esl_histogram.o esl_hyperexp.o esl_keyhash.o esl_minimizer.o esl_mixgev.o esl_mpi.o esl_msa.o esl_msacluster.o esl_msashuffle.o esl_msaweight.o esl_normal.o esl_paml.o esl_random.o esl_randomseq.o esl_ratematrix.o esl_regexp.o esl_rootfinder.o esl_scorematrix.o esl_sq.o esl_sqio.o esl_sse.o esl_ssi.o esl_stack.o esl_stats.o esl_stopwatch.o esl_stretchexp.o esl_swat.o esl_tree.o esl_vectorops.o esl_vmx.o esl_weibull.o esl_wuss.o
a - easel.o
a - esl_alphabet.o
a - esl_cluster.o
a - esl_dirichlet.o
a - esl_distance.o
a - esl_dmatrix.o
a - esl_exponential.o
a - esl_fileparser.o
a - esl_gamma.o
a - esl_getopts.o
a - esl_gev.o
a - esl_gumbel.o
a - esl_histogram.o
a - esl_hyperexp.o
a - esl_keyhash.o
a - esl_minimizer.o
a - esl_mixgev.o
a - esl_mpi.o
a - esl_msa.o
a - esl_msacluster.o
a - esl_msashuffle.o
a - esl_msaweight.o
a - esl_normal.o
a - esl_paml.o
a - esl_random.o
a - esl_randomseq.o
a - esl_ratematrix.o
a - esl_regexp.o
a - esl_rootfinder.o
a - esl_scorematrix.o
a - esl_sq.o
a - esl_sqio.o
a - esl_sse.o
a - esl_ssi.o
a - esl_stack.o
a - esl_stats.o
a - esl_stopwatch.o
a - esl_stretchexp.o
a - esl_swat.o
a - esl_tree.o
a - esl_vectorops.o
a - esl_vmx.o
a - esl_weibull.o
a - esl_wuss.o
x86_64-pc-linux-gnu-ranlib libeasel.a
chmod 644 libeasel.a
make -C miniapps
make[2]: Entering directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/easel/miniapps'
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-afetch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-alimanip.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-alimap.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-alistat.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-compalign.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-compstruct.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-construct.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-histplot.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-reformat.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-selectn.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-seqstat.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-sfetch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-shuffle.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-ssdraw.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -I.. -c esl-weight.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-afetch esl-afetch.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-alimap esl-alimap.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-alistat esl-alistat.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-compalign esl-compalign.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-compstruct esl-compstruct.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-construct esl-construct.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-histplot esl-histplot.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-reformat esl-reformat.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-selectn esl-selectn.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-seqstat esl-seqstat.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-sfetch esl-sfetch.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-shuffle esl-shuffle.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-weight esl-weight.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-alimanip esl-alimanip.o  -leasel   -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -msse2 -DHAVE_CONFIG_H -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -L.. -o esl-ssdraw esl-ssdraw.o  -leasel   -lm
make[2]: Leaving directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/easel/miniapps'
make[1]: Leaving directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/easel'
make -C src 
make[1]: Entering directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/src'
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmalign.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_dpalign.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_dpsearch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_dpsmall.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_io.c
cm_io.c: In function ‘tagged_bin_string_read’:
cm_io.c:1381:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1381 |   fread(&tag, sizeof(int), 1, fp);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cm_io.c:1383:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1383 |   fread(&nbytes, sizeof(int), 1, fp);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cm_io.c:1387:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1387 |     fread(s, sizeof(char), nbytes, fp);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cm_io.c: In function ‘tagged_fread’:
cm_io.c:1356:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1356 |   fread(&tag,    sizeof(int), 1,     fp); if (tag    != expected_tag) return 0;
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cm_io.c:1357:3: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1357 |   fread(&nbytes, sizeof(int), 1,     fp); if (nbytes != (size*nmemb)) return 0;
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cm_io.c:1359:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ []8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wunused-result-Wunused-result]8;;]
 1359 |     fread(s, size, nmemb, fp);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_modelconfig.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_modelmaker.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_mx.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_parsetree.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_qdband.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cm_submodel.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9_dp.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9_modelconfig.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9_modelmaker.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9_mx.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cp9_trace.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c alphabet.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c dispatch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c display.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c eweight.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c errors.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c hmmband.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c hybridsearch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c logsum.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c mpisupport.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c prior.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c rnamat.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c searchinfo.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c seqstoaln.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c stats.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c truncyk.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmbuild.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmcalibrate.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmemit.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmscore.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmsearch.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c cmstat.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c trcyk.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel  -c truncyk_check.c
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmalign cmalign.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmbuild cmbuild.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmcalibrate cmcalibrate.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmemit cmemit.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmscore cmscore.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmsearch cmsearch.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o cmstat cmstat.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o trcyk trcyk.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -L../easel  -o truncyk_check truncyk_check.o cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o -leasel  -lm 
make[1]: Leaving directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/src'
make -C src module
make[1]: Entering directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/src'
x86_64-pc-linux-gnu-ar rcv libinfernal.a cm.o cm_dpalign.o cm_dpsearch.o cm_dpsmall.o cm_io.o cm_modelconfig.o cm_modelmaker.o cm_mx.o cm_parsetree.o cm_qdband.o cm_submodel.o cp9.o cp9_dp.o cp9_modelconfig.o cp9_modelmaker.o cp9_mx.o cp9_trace.o alphabet.o dispatch.o display.o eweight.o errors.o hmmband.o hybridsearch.o logsum.o mpisupport.o prior.o rnamat.o searchinfo.o seqstoaln.o stats.o truncyk.o
a - cm.o
a - cm_dpalign.o
a - cm_dpsearch.o
a - cm_dpsmall.o
a - cm_io.o
a - cm_modelconfig.o
a - cm_modelmaker.o
a - cm_mx.o
a - cm_parsetree.o
a - cm_qdband.o
a - cm_submodel.o
a - cp9.o
a - cp9_dp.o
a - cp9_modelconfig.o
a - cp9_modelmaker.o
a - cp9_mx.o
a - cp9_trace.o
a - alphabet.o
a - dispatch.o
a - display.o
a - eweight.o
a - errors.o
a - hmmband.o
a - hybridsearch.o
a - logsum.o
a - mpisupport.o
a - prior.o
a - rnamat.o
a - searchinfo.o
a - seqstoaln.o
a - stats.o
a - truncyk.o
x86_64-pc-linux-gnu-ranlib libinfernal.a
chmod 644 libinfernal.a
make[1]: Leaving directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/src'
make -C testsuite
make[1]: Entering directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/testsuite'
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel/ -I../src  -c bandcyk-montecarlo-test.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel/ -I../src  -c bandcyk-truncation-test.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel/ -I../src  -c cp9-test.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -DHAVE_CONFIG_H -I../easel/ -I../src  -c sub_cm-test.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -DHAVE_CONFIG_H -L../easel/ -L../src -o cp9-test cp9-test.o -linfernal -leasel -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -DHAVE_CONFIG_H -L../easel/ -L../src -o bandcyk-truncation-test bandcyk-truncation-test.o -linfernal -leasel -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -DHAVE_CONFIG_H -L../easel/ -L../src -o bandcyk-montecarlo-test bandcyk-montecarlo-test.o -linfernal -leasel -lm
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -DHAVE_CONFIG_H -L../easel/ -L../src -o sub_cm-test sub_cm-test.o -linfernal -leasel -lm
make[1]: Leaving directory '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2/testsuite'
>>> Source compiled.
>>> Test phase: sci-biology/infernal-1.0.2-r1
make -j4 V=1   check
(cd testsuite; ./sqc -p ../easel/miniapps 4 exercises.sqc . ../src)
/bin/sh: ./sqc: Permission denied
make: *** [Makefile:187: check] Error 126
 * ERROR: sci-biology/infernal-1.0.2-r1::gentoo failed (test phase):
 *   Make check failed. See above for details.
 * 
 * Call stack:
 *            ebuild.sh, line  125:  Called src_test
 *          environment, line 1137:  Called default
 *   phase-functions.sh, line  855:  Called default_src_test
 *   phase-functions.sh, line  884:  Called __eapi0_src_test
 *     phase-helpers.sh, line  779:  Called die
 * The specific snippet of code:
 *   		$emake_cmd ${internal_opts} check || \
 *   			die "Make check failed. See above for details."
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/infernal-1.0.2-r1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/infernal-1.0.2-r1::gentoo'`.
 * The complete build log is located at '/var/log/emerge-log/build/sci-biology/infernal-1.0.2-r1:20200622-231938.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2'
 * S: '/var/tmp/portage/sci-biology/infernal-1.0.2-r1/work/infernal-1.0.2'



emerge --info:
Portage 2.3.102 (python 3.7.7-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r5, 5.4.0-1015-aws x86_64)
=================================================================
System uname: Linux-5.4.0-1015-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7
KiB Mem:    16011340 total,  10475104 free
KiB Swap:          0 total,         0 free
sh bash 5.0_p17
ld GNU ld (Gentoo 2.34 p4) 2.34.0
app-shells/bash:          5.0_p17::gentoo
dev-lang/perl:            5.30.3-r1::gentoo
dev-lang/python:          2.7.18::gentoo, 3.7.7-r2::gentoo, 3.8.3::gentoo
sys-apps/baselayout:      2.7::gentoo
sys-apps/openrc:          0.42.1::gentoo
sys-apps/sandbox:         2.20::gentoo
sys-devel/autoconf:       2.69-r5::gentoo
sys-devel/automake:       1.16.2::gentoo
sys-devel/binutils:       2.34-r1::gentoo
sys-devel/gcc:            10.1.0-r1::gentoo
sys-devel/gcc-config:     2.3.1::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.3::gentoo
sys-kernel/linux-headers: 5.7::gentoo (virtual/os-headers)
sys-libs/glibc:           2.31-r5::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-extra-opts: 
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-jobs: 1

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps=y -1 -k -b"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="C.UTF8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0"
MAKEOPTS="-j4 V=1"
PKGDIR="/root/.packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib native-symlinks ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS