* Package: sys-cluster/mpich2-1.5 * Repository: gentoo * Maintainer: cluster@gentoo.org * USE: abi_x86_64 amd64 cxx elibc_glibc fortran kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox test userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran >>> Unpacking source... >>> Unpacking mpich2-1.5.tar.gz to /var/tmp/portage/sys-cluster/mpich2-1.5/work >>> Source unpacked in /var/tmp/portage/sys-cluster/mpich2-1.5/work >>> Preparing source in /var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5 ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5 ... * econf: updating mpich2-1.5/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/armci/m4/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/armci/m4/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/openpa/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/openpa/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpe2/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpe2/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/trace_rlog/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/trace_rlog/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/trace_sample/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpe2/src/slog2sdk/trace_sample/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/mpi/romio/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/mpi/romio/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/pm/hydra/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/pm/hydra/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/pm/hydra/tools/topo/hwloc/hwloc/config/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/pm/hydra/tools/topo/hwloc/hwloc/config/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/src/pm/hydra/mpl/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/src/pm/hydra/mpl/confdb/config.guess with /usr/share/gnuconfig/config.guess * econf: updating mpich2-1.5/test/mpi/confdb/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpich2-1.5/test/mpi/confdb/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --libdir=/usr/lib64 --enable-shared --with-thread-package=none --enable-threads=single --sysconfdir=/etc/mpich2 --docdir=/usr/share/doc/mpich2-1.5 --with-pm=hydra --disable-mpe --disable-fast --enable-smpcoll --enable-versioning --disable-romio --enable-cxx --enable-f77 --enable-fc Configuring MPICH2 version 1.5 with '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--libdir=/usr/lib64' '--enable-shared' '--with-thread-package=none' '--enable-threads=single' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.5' '--with-pm=hydra' '--disable-mpe' '--disable-fast' '--enable-smpcoll' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-f77' '--enable-fc' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICH2LIB_CFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_CPPFLAGS=' 'MPICH2LIB_CXXFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FCFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' 'CC=x86_64-pc-linux-gnu-gcc' 'CPP=x86_64-pc-linux-gnu-gcc -E' 'CXX=x86_64-pc-linux-gnu-g++' 'F77=x86_64-pc-linux-gnu-gfortran' 'FC=x86_64-pc-linux-gnu-gfortran' 'GCOV=x86_64-pc-linux-gnu-gcov' Running on system: Linux localhost 5.4.0-1009-aws #9-Ubuntu SMP Sun Apr 12 19:46:01 UTC 2020 x86_64 AMD EPYC 7571 AuthenticAMD GNU/Linux checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking whether x86_64-pc-linux-gnu-gcc and cc understand -c and -o together... yes checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for a BSD-compatible install... /usr/lib/portage/python3.7/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking whether make supports nested variables... yes checking dependency style of x86_64-pc-linux-gnu-gcc... none checking whether to enable maintainer-specific portions of Makefiles... yes checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-ld checking if the linker (x86_64-pc-linux-gnu-ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... x86_64-pc-linux-gnu-nm checking the name lister (x86_64-pc-linux-gnu-nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for x86_64-pc-linux-gnu-ld option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse x86_64-pc-linux-gnu-nm output from x86_64-pc-linux-gnu-gcc object... ok checking for sysroot... no checking for x86_64-pc-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking dependency style of x86_64-pc-linux-gnu-g++... none checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for ld used by x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-ld -m elf_x86_64 checking if the linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-g++ linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for x86_64-pc-linux-gnu-ifort... x86_64-pc-linux-gnu-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gfortran linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for x86_64-pc-linux-gnu-ifort... x86_64-pc-linux-gnu-gfortran checking whether we are using the GNU Fortran compiler... yes checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gfortran linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: RUNNING PREREQ FOR ch3:nemesis checking for getpagesize... yes configure: ===== configuring src/mpl ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--libdir=/usr/lib64' '--enable-shared' '--with-thread-package=none' '--enable-threads=single' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.5' '--with-pm=hydra' '--disable-mpe' '--disable-fast' '--enable-smpcoll' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-f77' '--enable-fc' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICH2LIB_CFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_CPPFLAGS=' 'MPICH2LIB_CXXFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FCFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' 'CC=x86_64-pc-linux-gnu-gcc' 'CPP=x86_64-pc-linux-gnu-gcc -E' 'CXX=x86_64-pc-linux-gnu-g++' 'F77=x86_64-pc-linux-gnu-gfortran' 'FC=x86_64-pc-linux-gnu-gfortran' 'GCOV=x86_64-pc-linux-gnu-gcov' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/lib/portage/python3.7/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking dependency style of x86_64-pc-linux-gnu-gcc... none checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-ld -m elf_x86_64 checking if the linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... x86_64-pc-linux-gnu-nm checking the name lister (x86_64-pc-linux-gnu-nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for x86_64-pc-linux-gnu-ld -m elf_x86_64 option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse x86_64-pc-linux-gnu-nm output from x86_64-pc-linux-gnu-gcc object... ok checking for sysroot... no checking for x86_64-pc-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc linker (x86_64-pc-linux-gnu-ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... yes checking for x86_64-pc-linux-gnu-gcc... (cached) x86_64-pc-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking dependency style of x86_64-pc-linux-gnu-gcc... (cached) none checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for variable argument list macro functionality... yes checking for gcov... x86_64-pc-linux-gnu-gcov checking whether the compiler supports __typeof(variable)... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking valgrind.h usability... no checking valgrind.h presence... no checking for valgrind.h... no checking memcheck.h usability... no checking memcheck.h presence... no checking for memcheck.h... no checking valgrind/valgrind.h usability... no checking valgrind/valgrind.h presence... no checking for valgrind/valgrind.h... no checking valgrind/memcheck.h usability... no checking valgrind/memcheck.h presence... no checking for valgrind/memcheck.h... no checking helgrind.h usability... no checking helgrind.h presence... no checking for helgrind.h... no checking valgrind/helgrind.h usability... no checking valgrind/helgrind.h presence... no checking for valgrind/helgrind.h... no checking drd.h usability... no checking drd.h presence... no checking for drd.h... no checking valgrind/drd.h usability... no checking valgrind/drd.h presence... no checking for valgrind/drd.h... no checking whether the valgrind headers are broken or too old... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for strncmp... yes checking whether strncmp needs a declaration... no checking for putenv... yes checking whether putenv needs a declaration... no checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating include/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing include/mplconfig.h commands config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines configure: ===== done with src/mpl configure ===== configure: sourcing src/mpl/localdefs configure: ===== configuring src/openpa ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr' --with-atomic-primitives=auto_allow_emulation '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--disable-dependency-tracking' '--disable-silent-rules' '--libdir=/usr/lib64' '--enable-shared' '--with-thread-package=none' '--enable-threads=single' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.5' '--with-pm=hydra' '--disable-mpe' '--disable-fast' '--enable-smpcoll' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-f77' '--enable-fc' 'build_alias=x86_64-pc-linux-gnu' 'host_alias=x86_64-pc-linux-gnu' 'MPICH2LIB_CFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_CPPFLAGS=' 'MPICH2LIB_CXXFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_FCFLAGS=-O2 -pipe -march=native -frecord-gcc-switches' 'MPICH2LIB_LDFLAGS=-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0' 'CC=x86_64-pc-linux-gnu-gcc' 'CPP=x86_64-pc-linux-gnu-gcc -E' 'CXX=x86_64-pc-linux-gnu-g++' 'F77=x86_64-pc-linux-gnu-gfortran' 'FC=x86_64-pc-linux-gnu-gfortran' 'GCOV=x86_64-pc-linux-gnu-gcov' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/lib/portage/python3.7/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking dependency style of x86_64-pc-linux-gnu-gcc... none checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking the archiver (x86_64-pc-linux-gnu-ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-ld -m elf_x86_64 checking if the linker (x86_64-pc-linux-gnu-ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... x86_64-pc-linux-gnu-nm checking the name lister (x86_64-pc-linux-gnu-nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for x86_64-pc-linux-gnu-ld -m elf_x86_64 option to reload object files... -r checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-pc-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-pc-linux-gnu-ar... (cached) x86_64-pc-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking command to parse x86_64-pc-linux-gnu-nm output from x86_64-pc-linux-gnu-gcc object... ok checking for sysroot... no checking for x86_64-pc-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-pc-linux-gnu-gcc linker (x86_64-pc-linux-gnu-ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... yes checking for x86_64-pc-linux-gnu-gcc... (cached) x86_64-pc-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... (cached) yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking dependency style of x86_64-pc-linux-gnu-gcc... (cached) none checking whether to enable assertions... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking atomic.h usability... no checking atomic.h presence... no checking for atomic.h... no checking intrin.h usability... no checking intrin.h presence... no checking for intrin.h... no checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking for an ANSI C-conforming const... yes checking for pthread_create in -lpthread... yes checking for pthread_yield... yes checking if 100 threads can be run at once... yes checking size of void *... 8 checking size of int... 4 checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking if compiler rejects bogus asm statements... yes checking for support for gcc x86/x86_64 primitives... yes checking for support for gcc x86 primitives for pre-Pentium 4... yes checking for support for gcc ia64 primitives... no checking for support for gcc PowerPC atomics... no checking for support for gcc SiCortex atomics... no checking for support for gcc atomic intrinsics... yes checking for support for Windows NT atomic intrinsics... no checking for support for Sun atomic operations library... no checking whether to enable strict fairness checks... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating test/Makefile config.status: creating openpa.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing src/opa_config.h commands config.status: creating src/opa_config.h - prefix OPA for src/config.h defines configure: ===== done with src/openpa configure ===== sourcing /var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5/src/pm/hydra/mpich2prereq checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking for type of weak symbol alias support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute__ ((weak_import)) allowed... yes checking whether __attribute__((weak,alias(...))) allowed... no checking for multiple weak symbol support... yes checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf) checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.1.0/../../.. -lgfortran -lm -lquadmath checking whether x86_64-pc-linux-gnu-gfortran accepts the FLIBS found by autoconf... yes checking whether x86_64-pc-linux-gnu-gcc links with FLIBS found by autoconf... yes checking whether Fortran 77 and C objects are compatible... yes checking for linker for Fortran main program... Use Fortran to link programs checking for Fortran 77 name mangling... lower uscore checking for libraries to link Fortran main with C stdio routines... none checking whether Fortran init will work with C... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (x86_64-pc-linux-gnu-gfortran -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0) works... yes checking whether the Fortran 90 compiler (x86_64-pc-linux-gnu-gfortran -O2 -pipe -march=native -frecord-gcc-switches -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0) is a cross-compiler... no checking whether Fortran 90 compiler works with Fortran 77 compiler... yes checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf) checking whether Fortran 77 accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking whether Fortran 77 compiler processes .F files with C preprocessor... yes checking whether x86_64-pc-linux-gnu-gfortran allows mismatched arguments... no configure: error: The Fortran compiler x86_64-pc-linux-gnu-gfortran will not compile files that call the same routine with arguments of different types. !!! Please attach the following file when seeking support: !!! /var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5/config.log * ERROR: sys-cluster/mpich2-1.5::gentoo failed (configure phase): * econf failed * * Call stack: * ebuild.sh, line 125: Called src_configure * environment, line 2076: Called econf '--enable-shared' '--with-thread-package=none' '--enable-threads=single' '--sysconfdir=/etc/mpich2' '--docdir=/usr/share/doc/mpich2-1.5' '--with-pm=hydra' '--disable-mpe' '--disable-fast' '--enable-smpcoll' '--enable-versioning' '--disable-romio' '--enable-cxx' '--enable-f77' '--enable-fc' * phase-helpers.sh, line 681: Called __helpers_die 'econf failed' * isolated-functions.sh, line 112: Called die * The specific snippet of code: * die "$@" * * If you need support, post the output of `emerge --info '=sys-cluster/mpich2-1.5::gentoo'`, * the complete build log and the output of `emerge -pqv '=sys-cluster/mpich2-1.5::gentoo'`. * The complete build log is located at '/var/log/emerge-log/build/sys-cluster/mpich2-1.5:20200527-235730.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sys-cluster/mpich2-1.5/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sys-cluster/mpich2-1.5/temp/environment'. * Working directory: '/var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5' * S: '/var/tmp/portage/sys-cluster/mpich2-1.5/work/mpich2-1.5' emerge --info: Portage 2.3.100 (python 3.7.7-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r3, 5.4.0-1009-aws x86_64) ================================================================= System uname: Linux-5.4.0-1009-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7 KiB Mem: 16011344 total, 2621228 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Thu, 28 May 2020 06:35:31 +0000 sh bash 5.0_p17 ld GNU ld (Gentoo 2.34 p4) 2.34.0 app-shells/bash: 5.0_p17::gentoo dev-lang/perl: 5.30.2-r2::gentoo dev-lang/python: 2.7.18::gentoo, 3.7.7-r2::gentoo, 3.8.3::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/openrc: 0.42.1::gentoo sys-apps/sandbox: 2.18::gentoo sys-devel/autoconf: 2.69-r5::gentoo sys-devel/automake: 1.16.2::gentoo sys-devel/binutils: 2.34-r1::gentoo sys-devel/gcc: 10.1.0::gentoo sys-devel/gcc-config: 2.3::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.6::gentoo (virtual/os-headers) sys-libs/glibc: 2.31-r3::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-max-age: 24 sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: sync-rsync-verify-jobs: 1 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CC="x86_64-pc-linux-gnu-gcc" CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXX="x86_64-pc-linux-gnu-g++" CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--with-bdeps=y --binpkg-respect-use=y -1 -b -k" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="C.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" MAKEOPTS="-j4" PKGDIR="/root/.packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS