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Gentoo's Bugzilla – Attachment 641812 Details for
Bug 725426
sci-libs/cifparse-obj calls cc directly
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build.log
build.log (text/plain), 11.38 KB, created by
Agostino Sarubbo
on 2020-05-26 07:13:30 UTC
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Description:
build.log
Filename:
MIME Type:
Creator:
Agostino Sarubbo
Created:
2020-05-26 07:13:30 UTC
Size:
11.38 KB
patch
obsolete
> * Package: sci-libs/cifparse-obj-7.105 > * Repository: gentoo > * Maintainer: sci-chemistry@gentoo.org > * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox test userpriv usersandbox >>>> Unpacking source... >>>> Unpacking cifparse-obj-v7.105-prod-src.tar.gz to /var/tmp/portage/sci-libs/cifparse-obj-7.105/work >>>> Source unpacked in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work >>>> Preparing source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... > * Applying cifparse-obj-7.105-makefile.patch ... > [ ok ] > * Applying cifparse-obj-7.025-gcc5_6.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src ... >make -j4 -j1 'C_OPT=-O2 -pipe -march=native -frecord-gcc-switches' 'CXX_OPT=-O2 -pipe -march=native -frecord-gcc-switches' > >------------------------------------------------------------ >**** Making etc **** >------------------------------------------------------------ >./platform.sh: line 70: gcc: command not found >./platform.sh: line 74: gcc: command not found >./platform.sh: line 78: gcc: command not found >Warning: this seems to be an unsupported operating system. > >Supported systems are: > SunOS ...... version 4.1.x and 5.2 or higher > Linux ...... any version > SGI IRIX ... version 5.3-6.4 > >------------------------------------------------------------ >**** Making common **** >------------------------------------------------------------ >make[1]: Entering directory '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src/common' >c src/RcsbPlatform.C -o ./obj/RcsbPlatform.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: RcsbPlatform.o] Error 127 (ignored) >c src/RcsbFile.C -o ./obj/RcsbFile.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: RcsbFile.o] Error 127 (ignored) >c src/BlockIO.C -o ./obj/BlockIO.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: BlockIO.o] Error 127 (ignored) >c src/Serializer.C -o ./obj/Serializer.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: Serializer.o] Error 127 (ignored) >c src/GenString.C -o ./obj/GenString.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: GenString.o] Error 127 (ignored) >c src/CifString.C -o ./obj/CifString.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: CifString.o] Error 127 (ignored) >c src/GenCont.C -o ./obj/GenCont.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: GenCont.o] Error 127 (ignored) >c src/Exceptions.C -o ./obj/Exceptions.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: Exceptions.o] Error 127 (ignored) >c src/DataInfo.C -o ./obj/DataInfo.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: DataInfo.o] Error 127 (ignored) >c src/mapped_vector.C -o ./obj/mapped_vector.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: mapped_vector.o] Error 127 (ignored) >c src/mapped_ptr_vector.C -o ./obj/mapped_ptr_vector.o >make[1]: c: No such file or directory >make[1]: [Makefile:154: mapped_ptr_vector.o] Error 127 (ignored) >x86_64-pc-linux-gnu-ar: invalid option -- '.' >Usage: x86_64-pc-linux-gnu-ar [emulation options] [-]{dmpqrstx}[abcDfilMNoOPsSTuvV] [--plugin <name>] [member-name] [count] archive-file file... > x86_64-pc-linux-gnu-ar -M [<mri-script] > commands: > d - delete file(s) from the archive > m[ab] - move file(s) in the archive > p - print file(s) found in the archive > q[f] - quick append file(s) to the archive > r[ab][f][u] - replace existing or insert new file(s) into the archive > s - act as ranlib > t[O][v] - display contents of the archive > x[o] - extract file(s) from the archive > command specific modifiers: > [a] - put file(s) after [member-name] > [b] - put file(s) before [member-name] (same as [i]) > [D] - use zero for timestamps and uids/gids > [U] - use actual timestamps and uids/gids (default) > [N] - use instance [count] of name > [f] - truncate inserted file names > [P] - use full path names when matching > [o] - preserve original dates > [O] - display offsets of files in the archive > [u] - only replace files that are newer than current archive contents > generic modifiers: > [c] - do not warn if the library had to be created > [s] - create an archive index (cf. ranlib) > [S] - do not build a symbol table > [T] - make a thin archive > [v] - be verbose > [V] - display the version number > @<file> - read options from <file> > --target=BFDNAME - specify the target object format as BFDNAME > --output=DIRNAME - specify the output directory for extraction operations > optional: > --plugin <p> - load the specified plugin > emulation options: > No emulation specific options >x86_64-pc-linux-gnu-ar: supported targets: elf64-x86-64 elf32-i386 elf32-iamcu elf32-x86-64 pei-i386 pei-x86-64 elf64-l1om elf64-k1om elf64-little elf64-big elf32-little elf32-big srec symbolsrec verilog tekhex binary ihex plugin >make[1]: *** [Makefile:147: lib/common.a] Error 1 >make[1]: Leaving directory '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src/common' >make: *** [Makefile:30: compile] Error 1 > * ERROR: sci-libs/cifparse-obj-7.105::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-libs/cifparse-obj-7.105::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-libs/cifparse-obj-7.105::gentoo'`. > * The complete build log is located at '/var/log/emerge-log/build/sci-libs/cifparse-obj-7.105:20200526-022207.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/cifparse-obj-7.105/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-libs/cifparse-obj-7.105/temp/environment'. > * Working directory: '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src' > * S: '/var/tmp/portage/sci-libs/cifparse-obj-7.105/work/cifparse-obj-v7.105-prod-src' > > > >emerge --info: >Portage 2.3.100 (python 3.7.7-final-0, default/linux/amd64/17.1, gcc-10.1.0, glibc-2.31-r3, 5.4.0-1009-aws x86_64) >================================================================= >System uname: Linux-5.4.0-1009-aws-x86_64-AMD_EPYC_7571-with-gentoo-2.7 >KiB Mem: 16011344 total, 7507868 free >KiB Swap: 0 total, 0 free >Timestamp of repository gentoo: Tue, 26 May 2020 06:35:40 +0000 >sh bash 5.0_p17 >ld GNU ld (Gentoo 2.34 p4) 2.34.0 >app-shells/bash: 5.0_p17::gentoo >dev-lang/perl: 5.30.2-r2::gentoo >dev-lang/python: 2.7.18::gentoo, 3.7.7-r2::gentoo, 3.8.3::gentoo >sys-apps/baselayout: 2.7::gentoo >sys-apps/openrc: 0.42.1::gentoo >sys-apps/sandbox: 2.18::gentoo >sys-devel/autoconf: 2.69-r5::gentoo >sys-devel/automake: 1.16.2::gentoo >sys-devel/binutils: 2.34-r1::gentoo >sys-devel/gcc: 10.1.0::gentoo >sys-devel/gcc-config: 2.3::gentoo >sys-devel/libtool: 2.4.6-r6::gentoo >sys-devel/make: 4.3::gentoo >sys-kernel/linux-headers: 5.6::gentoo (virtual/os-headers) >sys-libs/glibc: 2.31-r3::gentoo >Repositories: > >gentoo > location: /usr/portage > sync-type: rsync > sync-uri: rsync://rsync.gentoo.org/gentoo-portage > priority: -1000 > sync-rsync-verify-max-age: 24 > sync-rsync-verify-jobs: 1 > sync-rsync-verify-metamanifest: yes > sync-rsync-extra-opts: > >ACCEPT_KEYWORDS="amd64 ~amd64" >ACCEPT_LICENSE="*" >CBUILD="x86_64-pc-linux-gnu" >CC="x86_64-pc-linux-gnu-gcc" >CFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" >CHOST="x86_64-pc-linux-gnu" >CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" >CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" >CXX="x86_64-pc-linux-gnu-g++" >CXXFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" >DISTDIR="/usr/portage/distfiles" >EMERGE_DEFAULT_OPTS="--with-bdeps=y --binpkg-respect-use=y -1 -b -k" >ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" >FCFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" >FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" >FFLAGS="-O2 -pipe -march=native -frecord-gcc-switches" >GENTOO_MIRRORS="http://distfiles.gentoo.org" >LANG="C.UTF-8" >LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0" >MAKEOPTS="-j4" >PKGDIR="/root/.packages" >PORTAGE_CONFIGROOT="/" >PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" >PORTAGE_TMPDIR="/var/tmp" >USE="acl amd64 berkdb bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nls nptl openmp pam pcre readline seccomp split-usr ssl tcpd unicode xattr zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" >Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS >
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bug 725426
: 641812