CMakeError.log

CMakeError.log (text/plain), 13.60 KB, created by Toralf Förster on 2020-04-08 07:06:31 UTC

Determining if the isfinite exist failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_76059/fast && /usr/bin/gmake -f CMakeFiles/cmTC_76059.dir/build.make CMakeFiles/cmTC_76059.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_76059.dir/CheckSymbolExists.cxx.o
/usr/bin/x86_64-pc-linux-gnu-g++     -DNDEBUG -std=c++11  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security    -o CMakeFiles/cmTC_76059.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function ‘int main(int, char**)’:
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: ‘isfinite’ was not declared in this scope; did you mean ‘std::isfinite’?
    8 |   return ((int*)(&isfinite))[argc];
      |                   ^~~~~~~~
      |                   std::isfinite
In file included from /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2:
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/include/g++-v9/cmath:578:5: note: ‘std::isfinite’ declared here
  578 |     isfinite(_Tp __x)
      |     ^~~~~~~~
gmake[1]: *** [CMakeFiles/cmTC_76059.dir/build.make:83: CMakeFiles/cmTC_76059.dir/CheckSymbolExists.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_76059/fast] Error 2


File /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:
/* */
#include <cmath>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef isfinite
  return ((int*)(&isfinite))[argc];
#else
  (void)argc;
  return 0;
#endif
}
Determining if the isinf exist failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_7a138/fast && /usr/bin/gmake -f CMakeFiles/cmTC_7a138.dir/build.make CMakeFiles/cmTC_7a138.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_7a138.dir/CheckSymbolExists.cxx.o
/usr/bin/x86_64-pc-linux-gnu-g++     -DNDEBUG -std=c++11  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security    -o CMakeFiles/cmTC_7a138.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function ‘int main(int, char**)’:
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: ‘isinf’ was not declared in this scope; did you mean ‘std::isinf’?
    8 |   return ((int*)(&isinf))[argc];
      |                   ^~~~~
      |                   std::isinf
In file included from /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2:
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/include/g++-v9/cmath:605:5: note: ‘std::isinf’ declared here
  605 |     isinf(_Tp __x)
      |     ^~~~~
gmake[1]: *** [CMakeFiles/cmTC_7a138.dir/build.make:83: CMakeFiles/cmTC_7a138.dir/CheckSymbolExists.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_7a138/fast] Error 2


File /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:
/* */
#include <cmath>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef isinf
  return ((int*)(&isinf))[argc];
#else
  (void)argc;
  return 0;
#endif
}
Determining if the isnan exist failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_5aef8/fast && /usr/bin/gmake -f CMakeFiles/cmTC_5aef8.dir/build.make CMakeFiles/cmTC_5aef8.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building CXX object CMakeFiles/cmTC_5aef8.dir/CheckSymbolExists.cxx.o
/usr/bin/x86_64-pc-linux-gnu-g++     -DNDEBUG -std=c++11  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security    -o CMakeFiles/cmTC_5aef8.dir/CheckSymbolExists.cxx.o -c /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx: In function ‘int main(int, char**)’:
/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:8:19: error: ‘isnan’ was not declared in this scope; did you mean ‘std::isnan’?
    8 |   return ((int*)(&isnan))[argc];
      |                   ^~~~~
      |                   std::isnan
In file included from /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:2:
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/include/g++-v9/cmath:632:5: note: ‘std::isnan’ declared here
  632 |     isnan(_Tp __x)
      |     ^~~~~
gmake[1]: *** [CMakeFiles/cmTC_5aef8.dir/build.make:83: CMakeFiles/cmTC_5aef8.dir/CheckSymbolExists.cxx.o] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_5aef8/fast] Error 2


File /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/CheckSymbolExists.cxx:
/* */
#include <cmath>

int main(int argc, char** argv)
{
  (void)argv;
#ifndef isnan
  return ((int*)(&isnan))[argc];
#else
  (void)argc;
  return 0;
#endif
}
Determining if the function isfinite exists failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_e7c5a/fast && /usr/bin/gmake -f CMakeFiles/cmTC_e7c5a.dir/build.make CMakeFiles/cmTC_e7c5a.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_e7c5a.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=isfinite   -o CMakeFiles/cmTC_e7c5a.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_e7c5a
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_e7c5a.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=isfinite  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0  -rdynamic CMakeFiles/cmTC_e7c5a.dir/CheckFunctionExists.c.o  -o cmTC_e7c5a  -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_e7c5a.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `isfinite'
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_e7c5a.dir/build.make:104: cmTC_e7c5a] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_e7c5a/fast] Error 2



Determining if the function arc4random exists failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_8fab0/fast && /usr/bin/gmake -f CMakeFiles/cmTC_8fab0.dir/build.make CMakeFiles/cmTC_8fab0.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_8fab0.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=arc4random   -o CMakeFiles/cmTC_8fab0.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_8fab0
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_8fab0.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=arc4random  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0  -rdynamic CMakeFiles/cmTC_8fab0.dir/CheckFunctionExists.c.o  -o cmTC_8fab0  -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_8fab0.dir/CheckFunctionExists.c.o: in function `main':
CheckFunctionExists.c:(.text.startup+0xc): undefined reference to `arc4random'
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_8fab0.dir/build.make:104: cmTC_8fab0] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_8fab0/fast] Error 2



Performing C SOURCE FILE Test CMAKE_HAVE_LIBC_PTHREAD failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_7544b/fast && /usr/bin/gmake -f CMakeFiles/cmTC_7544b.dir/build.make CMakeFiles/cmTC_7544b.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_7544b.dir/src.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCMAKE_HAVE_LIBC_PTHREAD   -o CMakeFiles/cmTC_7544b.dir/src.c.o -c /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp/src.c
Linking C executable cmTC_7544b
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_7544b.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCMAKE_HAVE_LIBC_PTHREAD  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0  -rdynamic CMakeFiles/cmTC_7544b.dir/src.c.o  -o cmTC_7544b  -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: CMakeFiles/cmTC_7544b.dir/src.c.o: in function `main':
src.c:(.text.startup+0x23): undefined reference to `pthread_create'
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text.startup+0x2c): undefined reference to `pthread_detach'
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text.startup+0x35): undefined reference to `pthread_cancel'
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: src.c:(.text.startup+0x40): undefined reference to `pthread_join'
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_7544b.dir/build.make:104: cmTC_7544b] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_7544b/fast] Error 2


Source file was:
#include <pthread.h>

void* test_func(void* data)
{
  return data;
}

int main(void)
{
  pthread_t thread;
  pthread_create(&thread, NULL, test_func, NULL);
  pthread_detach(thread);
  pthread_cancel(thread);
  pthread_join(thread, NULL);
  pthread_atfork(NULL, NULL, NULL);
  pthread_exit(NULL);

  return 0;
}

Determining if the function pthread_create exists in the pthreads failed with the following output:
Change Dir: /var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp

Run Build Command(s):/usr/bin/gmake cmTC_88e01/fast && /usr/bin/gmake -f CMakeFiles/cmTC_88e01.dir/build.make CMakeFiles/cmTC_88e01.dir/build
gmake[1]: Entering directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
Building C object CMakeFiles/cmTC_88e01.dir/CheckFunctionExists.c.o
/usr/bin/x86_64-pc-linux-gnu-gcc     -DNDEBUG -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=pthread_create   -o CMakeFiles/cmTC_88e01.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c
Linking C executable cmTC_88e01
/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_88e01.dir/link.txt --verbose=1
/usr/bin/x86_64-pc-linux-gnu-gcc  -O2 -pipe -march=native -falign-functions=32:25:16 -fno-common -Wformat -Werror=format-security -DCHECK_FUNCTION_EXISTS=pthread_create  -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0  -rdynamic CMakeFiles/cmTC_88e01.dir/CheckFunctionExists.c.o  -o cmTC_88e01  -lpthreads -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/9.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: cannot find -lpthreads
collect2: error: ld returned 1 exit status
gmake[1]: *** [CMakeFiles/cmTC_88e01.dir/build.make:104: cmTC_88e01] Error 1
gmake[1]: Leaving directory '/var/tmp/portage/sci-libs/shogun-5.0.0-r1/work/shogun-5.0.0_build/CMakeFiles/CMakeTmp'
gmake: *** [Makefile:138: cmTC_88e01/fast] Error 2