The system is: Linux - 5.6.2 - x86_64 Compiling the C compiler identification source file "CMakeCCompilerId.c" succeeded. Compiler: /usr/bin/x86_64-gentoo-linux-musl-gcc Build flags: -O2;-pipe;-march=native Id flags: The output was: 0 Compilation of the C compiler identification source "CMakeCCompilerId.c" produced "a.out" The C compiler identification is GNU, found in "/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/3.17.0/CompilerIdC/a.out" Compiling the CXX compiler identification source file "CMakeCXXCompilerId.cpp" succeeded. Compiler: /usr/bin/x86_64-gentoo-linux-musl-g++ Build flags: -O2;-pipe;-march=native Id flags: The output was: 0 Compilation of the CXX compiler identification source "CMakeCXXCompilerId.cpp" produced "a.out" The CXX compiler identification is GNU, found in "/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/3.17.0/CompilerIdCXX/a.out" Determining if the C compiler works passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_d6f31/fast && /usr/bin/gmake -f CMakeFiles/cmTC_d6f31.dir/build.make CMakeFiles/cmTC_d6f31.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_d6f31.dir/testCCompiler.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_d6f31.dir/testCCompiler.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/testCCompiler.c Linking C executable cmTC_d6f31 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_d6f31.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_d6f31.dir/testCCompiler.c.o -o cmTC_d6f31 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Detecting C compiler ABI info compiled with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_0d850/fast && /usr/bin/gmake -f CMakeFiles/cmTC_0d850.dir/build.make CMakeFiles/cmTC_0d850.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -v -o CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -c /usr/share/cmake/Modules/CMakeCCompilerABI.c Using built-in specs. COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-gcc Target: x86_64-gentoo-linux-musl Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c,c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp Thread model: posix gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o' '-c' /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/cc1 -quiet -v -D NDEBUG /usr/share/cmake/Modules/CMakeCCompilerABI.c -march=haswell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mno-rdseed -mno-prfchw -mno-adx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mno-clflushopt -mno-xsavec -mno-xsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=15360 -mtune=haswell -quiet -dumpbase CMakeCCompilerABI.c -auxbase-strip CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -O2 -version -o - | /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/as -v --64 -o CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o GNU C17 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl) compiled by GNU C version 9.3.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include" ignoring nonexistent directory "/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/include" #include "..." search starts here: #include <...> search starts here: /usr/include /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include End of search list. GNU C17 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl) compiled by GNU C version 9.3.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU assembler version 2.34.0 (x86_64-gentoo-linux-musl) using BFD version (Gentoo 2.34 p1) 2.34.0 Compiler executable checksum: 93f31a3b370082bd1816b64787dfbe19 COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/ LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o' '-c' Linking C executable cmTC_0d850 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_0d850.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -v -rdynamic CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -o cmTC_0d850 Using built-in specs. COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper Target: x86_64-gentoo-linux-musl Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c,c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp Thread model: posix gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/ LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_0d850' /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2 -plugin /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper -plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccIPNAAo.res -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s --eh-frame-hdr -m elf_x86_64 -export-dynamic -dynamic-linker /lib/ld-musl-x86_64.so.1 -pie -z now -o cmTC_0d850 /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../.. -O1 --as-needed --defsym=__gentoo_check_ldflags__=0 CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -lgcc --push-state --as-needed -lgcc_s --pop-state -lc -lgcc --push-state --as-needed -lgcc_s --pop-state /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_0d850' gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Parsed C implicit include dir info from above output: rv=done found start of include info found start of implicit include info add: [/usr/include] add: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] end of search list found collapse include dir [/usr/include] ==> [/usr/include] collapse include dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] implicit include dirs: [/usr/include;/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] Parsed C implicit link information from above output: link line regex: [^( *|.*[/\])(ld|CMAKE_LINK_STARTFILE-NOTFOUND|([^/\]+-)?ld|collect2)[^/\]*( |$)] ignore line: [Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp] ignore line: [] ignore line: [Run Build Command(s):/usr/bin/gmake cmTC_0d850/fast && /usr/bin/gmake -f CMakeFiles/cmTC_0d850.dir/build.make CMakeFiles/cmTC_0d850.dir/build] ignore line: [gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp'] ignore line: [Building C object CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o] ignore line: [/usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -v -o CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -c /usr/share/cmake/Modules/CMakeCCompilerABI.c] ignore line: [Using built-in specs.] ignore line: [COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-gcc] ignore line: [Target: x86_64-gentoo-linux-musl] ignore line: [Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp] ignore line: [Thread model: posix] ignore line: [gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) ] ignore line: [COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o' '-c'] ignore line: [ /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/cc1 -quiet -v -D NDEBUG /usr/share/cmake/Modules/CMakeCCompilerABI.c -march=haswell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mno-rdseed -mno-prfchw -mno-adx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mno-clflushopt -mno-xsavec -mno-xsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=15360 -mtune=haswell -quiet -dumpbase CMakeCCompilerABI.c -auxbase-strip CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -O2 -version -o - |] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/as -v --64 -o CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o] ignore line: [GNU C17 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl)] ignore line: [ compiled by GNU C version 9.3.0 GMP version 6.2.0 MPFR version 4.0.2 MPC version 1.1.0 isl version none] ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072] ignore line: [ignoring nonexistent directory "/usr/local/include"] ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/include"] ignore line: [#include "..." search starts here:] ignore line: [#include <...> search starts here:] ignore line: [ /usr/include] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] ignore line: [End of search list.] ignore line: [GNU C17 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl)] ignore line: [ compiled by GNU C version 9.3.0 GMP version 6.2.0 MPFR version 4.0.2 MPC version 1.1.0 isl version none] ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072] ignore line: [GNU assembler version 2.34.0 (x86_64-gentoo-linux-musl) using BFD version (Gentoo 2.34 p1) 2.34.0] ignore line: [Compiler executable checksum: 93f31a3b370082bd1816b64787dfbe19] ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/] ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o' '-c'] ignore line: [Linking C executable cmTC_0d850] ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_0d850.dir/link.txt --verbose=1] ignore line: [/usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl -O1 -Wl --as-needed -Wl --defsym=__gentoo_check_ldflags__=0 -v -rdynamic CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -o cmTC_0d850 ] ignore line: [Using built-in specs.] ignore line: [COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-gcc] ignore line: [COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper] ignore line: [Target: x86_64-gentoo-linux-musl] ignore line: [Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp] ignore line: [Thread model: posix] ignore line: [gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) ] ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/] ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_0d850'] link line: [ /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2 -plugin /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper -plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccIPNAAo.res -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lgcc_s --eh-frame-hdr -m elf_x86_64 -export-dynamic -dynamic-linker /lib/ld-musl-x86_64.so.1 -pie -z now -o cmTC_0d850 /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../.. -O1 --as-needed --defsym=__gentoo_check_ldflags__=0 CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o -lgcc --push-state --as-needed -lgcc_s --pop-state -lc -lgcc --push-state --as-needed -lgcc_s --pop-state /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o] arg [/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2] ==> ignore arg [-plugin] ==> ignore arg [/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so] ==> ignore arg [-plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper] ==> ignore arg [-plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccIPNAAo.res] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [-plugin-opt=-pass-through=-lc] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [--eh-frame-hdr] ==> ignore arg [-m] ==> ignore arg [elf_x86_64] ==> ignore arg [-export-dynamic] ==> ignore arg [-dynamic-linker] ==> ignore arg [/lib/ld-musl-x86_64.so.1] ==> ignore arg [-pie] ==> ignore arg [-znow] ==> ignore arg [-o] ==> ignore arg [cmTC_0d850] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o] ==> ignore arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] arg [-L/lib/../lib] ==> dir [/lib/../lib] arg [-L/usr/lib/../lib] ==> dir [/usr/lib/../lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] arg [-O1] ==> ignore arg [--as-needed] ==> ignore arg [--defsym=__gentoo_check_ldflags__=0] ==> ignore arg [CMakeFiles/cmTC_0d850.dir/CMakeCCompilerABI.c.o] ==> ignore arg [-lgcc] ==> lib [gcc] arg [--push-state] ==> ignore arg [--as-needed] ==> ignore arg [-lgcc_s] ==> lib [gcc_s] arg [--pop-state] ==> ignore arg [-lc] ==> lib [c] arg [-lgcc] ==> lib [gcc] arg [--push-state] ==> ignore arg [--as-needed] ==> ignore arg [-lgcc_s] ==> lib [gcc_s] arg [--pop-state] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o] ==> ignore collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] ==> [/usr/x86_64-gentoo-linux-musl/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] ==> [/usr/lib] collapse library dir [/lib/../lib] ==> [/lib] collapse library dir [/usr/lib/../lib] ==> [/usr/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] ==> [/usr/x86_64-gentoo-linux-musl/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] ==> [/usr/lib] implicit libs: [gcc;gcc_s;c;gcc;gcc_s] implicit dirs: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0;/usr/x86_64-gentoo-linux-musl/lib;/usr/lib;/lib] implicit fwks: [] Determining if the CXX compiler works passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_6363d/fast && /usr/bin/gmake -f CMakeFiles/cmTC_6363d.dir/build.make CMakeFiles/cmTC_6363d.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_6363d.dir/testCXXCompiler.cxx.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_6363d.dir/testCXXCompiler.cxx.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/testCXXCompiler.cxx Linking CXX executable cmTC_6363d /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_6363d.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_6363d.dir/testCXXCompiler.cxx.o -o cmTC_6363d gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Detecting CXX compiler ABI info compiled with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_1d246/fast && /usr/bin/gmake -f CMakeFiles/cmTC_1d246.dir/build.make CMakeFiles/cmTC_1d246.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -v -o CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp Using built-in specs. COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-g++ Target: x86_64-gentoo-linux-musl Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c,c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp Thread model: posix gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/cc1plus -quiet -v -D_GNU_SOURCE -D NDEBUG /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -march=haswell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mno-rdseed -mno-prfchw -mno-adx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mno-clflushopt -mno-xsavec -mno-xsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=15360 -mtune=haswell -quiet -dumpbase CMakeCXXCompilerABI.cpp -auxbase-strip CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -O2 -version -o - | /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/as -v --64 -o CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o GNU assembler version 2.34.0 (x86_64-gentoo-linux-musl) using BFD version (Gentoo 2.34 p1) 2.34.0 GNU C++14 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl) compiled by GNU C version 9.3.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include" ignoring nonexistent directory "/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/include" #include "..." search starts here: #include <...> search starts here: /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward /usr/include /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include End of search list. GNU C++14 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl) compiled by GNU C version 9.3.0, GMP version 6.2.0, MPFR version 4.0.2, MPC version 1.1.0, isl version none GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: f4035ad86aa599bdf07d6e4eaf7649b1 COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/ LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc' Linking CXX executable cmTC_1d246 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_1d246.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -v -rdynamic CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_1d246 Using built-in specs. COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper Target: x86_64-gentoo-linux-musl Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c,c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp Thread model: posix gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/ LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_1d246' '-shared-libgcc' /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2 -plugin /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper -plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccgOKjJF.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --eh-frame-hdr -m elf_x86_64 -export-dynamic -dynamic-linker /lib/ld-musl-x86_64.so.1 -pie -z now -o cmTC_1d246 /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../.. -O1 --as-needed --defsym=__gentoo_check_ldflags__=0 CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_1d246' '-shared-libgcc' gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Parsed CXX implicit include dir info from above output: rv=done found start of include info found start of implicit include info add: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9] add: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl] add: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward] add: [/usr/include] add: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] end of search list found collapse include dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9] collapse include dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl] collapse include dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward] collapse include dir [/usr/include] ==> [/usr/include] collapse include dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] implicit include dirs: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9;/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl;/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward;/usr/include;/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] Parsed CXX implicit link information from above output: link line regex: [^( *|.*[/\])(ld|CMAKE_LINK_STARTFILE-NOTFOUND|([^/\]+-)?ld|collect2)[^/\]*( |$)] ignore line: [Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp] ignore line: [] ignore line: [Run Build Command(s):/usr/bin/gmake cmTC_1d246/fast && /usr/bin/gmake -f CMakeFiles/cmTC_1d246.dir/build.make CMakeFiles/cmTC_1d246.dir/build] ignore line: [gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp'] ignore line: [Building CXX object CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o] ignore line: [/usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -v -o CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp] ignore line: [Using built-in specs.] ignore line: [COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-g++] ignore line: [Target: x86_64-gentoo-linux-musl] ignore line: [Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp] ignore line: [Thread model: posix] ignore line: [gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) ] ignore line: [COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc'] ignore line: [ /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/cc1plus -quiet -v -D_GNU_SOURCE -D NDEBUG /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -march=haswell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mno-rdseed -mno-prfchw -mno-adx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mno-clflushopt -mno-xsavec -mno-xsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=15360 -mtune=haswell -quiet -dumpbase CMakeCXXCompilerABI.cpp -auxbase-strip CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -O2 -version -o - |] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/as -v --64 -o CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o] ignore line: [GNU assembler version 2.34.0 (x86_64-gentoo-linux-musl) using BFD version (Gentoo 2.34 p1) 2.34.0] ignore line: [GNU C++14 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl)] ignore line: [ compiled by GNU C version 9.3.0 GMP version 6.2.0 MPFR version 4.0.2 MPC version 1.1.0 isl version none] ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072] ignore line: [ignoring nonexistent directory "/usr/local/include"] ignore line: [ignoring nonexistent directory "/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/include"] ignore line: [#include "..." search starts here:] ignore line: [#include <...> search starts here:] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/x86_64-gentoo-linux-musl] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/backward] ignore line: [ /usr/include] ignore line: [ /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include] ignore line: [End of search list.] ignore line: [GNU C++14 (Gentoo Hardened 9.3.0 p1) version 9.3.0 (x86_64-gentoo-linux-musl)] ignore line: [ compiled by GNU C version 9.3.0 GMP version 6.2.0 MPFR version 4.0.2 MPC version 1.1.0 isl version none] ignore line: [GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072] ignore line: [Compiler executable checksum: f4035ad86aa599bdf07d6e4eaf7649b1] ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/] ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-D' 'NDEBUG' '-O2' '-pipe' '-march=native' '-v' '-o' 'CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o' '-c' '-shared-libgcc'] ignore line: [Linking CXX executable cmTC_1d246] ignore line: [/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_1d246.dir/link.txt --verbose=1] ignore line: [/usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -Wl -O1 -Wl --as-needed -Wl --defsym=__gentoo_check_ldflags__=0 -v -rdynamic CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_1d246 ] ignore line: [Using built-in specs.] ignore line: [COLLECT_GCC=/usr/bin/x86_64-gentoo-linux-musl-g++] ignore line: [COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper] ignore line: [Target: x86_64-gentoo-linux-musl] ignore line: [Configured with: /var/tmp/portage/sys-devel/gcc-9.3.0/work/gcc-9.3.0/configure --host=x86_64-gentoo-linux-musl --build=x86_64-gentoo-linux-musl --prefix=/usr --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/9.3.0 --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0 --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/man --infodir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/info --with-gxx-include-dir=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/9.3.0/python --enable-languages=c c++ --enable-obsolete --enable-secureplt --disable-werror --with-system-zlib --enable-nls --without-included-gettext --enable-checking=release --with-bugurl=https://bugs.gentoo.org/ --with-pkgversion='Gentoo Hardened 9.3.0 p1' --enable-esp --enable-libstdcxx-time --disable-libstdcxx-pch --enable-shared --enable-threads=posix --enable-__cxa_atexit --disable-multilib --with-multilib-list=m64 --disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp --disable-libmudflap --disable-libssp --disable-systemtap --disable-vtable-verify --disable-libvtv --disable-libquadmath --enable-lto --without-isl --disable-libsanitizer --enable-default-pie --enable-default-ssp] ignore line: [Thread model: posix] ignore line: [gcc version 9.3.0 (Gentoo Hardened 9.3.0 p1) ] ignore line: [COMPILER_PATH=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/libexec/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/bin/] ignore line: [LIBRARY_PATH=/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/:/lib/../lib/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/:/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../:/lib/:/usr/lib/] ignore line: [COLLECT_GCC_OPTIONS='-O2' '-pipe' '-march=native' '-v' '-rdynamic' '-o' 'cmTC_1d246' '-shared-libgcc'] link line: [ /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2 -plugin /usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so -plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper -plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccgOKjJF.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --eh-frame-hdr -m elf_x86_64 -export-dynamic -dynamic-linker /lib/ld-musl-x86_64.so.1 -pie -z now -o cmTC_1d246 /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0 -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib -L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../.. -O1 --as-needed --defsym=__gentoo_check_ldflags__=0 CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o] arg [/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/collect2] ==> ignore arg [-plugin] ==> ignore arg [/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/liblto_plugin.so] ==> ignore arg [-plugin-opt=/usr/libexec/gcc/x86_64-gentoo-linux-musl/9.3.0/lto-wrapper] ==> ignore arg [-plugin-opt=-fresolution=/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/temp/ccgOKjJF.res] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [-plugin-opt=-pass-through=-lc] ==> ignore arg [-plugin-opt=-pass-through=-lgcc_s] ==> ignore arg [-plugin-opt=-pass-through=-lgcc] ==> ignore arg [--eh-frame-hdr] ==> ignore arg [-m] ==> ignore arg [elf_x86_64] ==> ignore arg [-export-dynamic] ==> ignore arg [-dynamic-linker] ==> ignore arg [/lib/ld-musl-x86_64.so.1] ==> ignore arg [-pie] ==> ignore arg [-znow] ==> ignore arg [-o] ==> ignore arg [cmTC_1d246] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/Scrt1.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crti.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtbeginS.o] ==> ignore arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] arg [-L/lib/../lib] ==> dir [/lib/../lib] arg [-L/usr/lib/../lib] ==> dir [/usr/lib/../lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] arg [-L/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] ==> dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] arg [-O1] ==> ignore arg [--as-needed] ==> ignore arg [--defsym=__gentoo_check_ldflags__=0] ==> ignore arg [CMakeFiles/cmTC_1d246.dir/CMakeCXXCompilerABI.cpp.o] ==> ignore arg [-lstdc++] ==> lib [stdc++] arg [-lm] ==> lib [m] arg [-lgcc_s] ==> lib [gcc_s] arg [-lgcc] ==> lib [gcc] arg [-lc] ==> lib [c] arg [-lgcc_s] ==> lib [gcc_s] arg [-lgcc] ==> lib [gcc] arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/crtendS.o] ==> ignore arg [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib/crtn.o] ==> ignore collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] ==> [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib/../lib] ==> [/usr/x86_64-gentoo-linux-musl/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../lib] ==> [/usr/lib] collapse library dir [/lib/../lib] ==> [/lib] collapse library dir [/usr/lib/../lib] ==> [/usr/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../../../x86_64-gentoo-linux-musl/lib] ==> [/usr/x86_64-gentoo-linux-musl/lib] collapse library dir [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/../../..] ==> [/usr/lib] implicit libs: [stdc++;m;gcc_s;gcc;c;gcc_s;gcc] implicit dirs: [/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0;/usr/x86_64-gentoo-linux-musl/lib;/usr/lib;/lib] implicit fwks: [] Determining if the include file sys/time.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_d49d3/fast && /usr/bin/gmake -f CMakeFiles/cmTC_d49d3.dir/build.make CMakeFiles/cmTC_d49d3.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_d49d3.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_d49d3.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_d49d3 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_d49d3.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_d49d3.dir/CheckIncludeFile.c.o -o cmTC_d49d3 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file time.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_58ba5/fast && /usr/bin/gmake -f CMakeFiles/cmTC_58ba5.dir/build.make CMakeFiles/cmTC_58ba5.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_58ba5.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_58ba5.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_58ba5 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_58ba5.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_58ba5.dir/CheckIncludeFile.c.o -o cmTC_58ba5 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file strings.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_084f8/fast && /usr/bin/gmake -f CMakeFiles/cmTC_084f8.dir/build.make CMakeFiles/cmTC_084f8.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_084f8.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_084f8.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_084f8 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_084f8.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_084f8.dir/CheckIncludeFile.c.o -o cmTC_084f8 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file regex.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_a22ea/fast && /usr/bin/gmake -f CMakeFiles/cmTC_a22ea.dir/build.make CMakeFiles/cmTC_a22ea.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_a22ea.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_a22ea.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_a22ea /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_a22ea.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_a22ea.dir/CheckIncludeFile.c.o -o cmTC_a22ea gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file sstream exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_cfbce/fast && /usr/bin/gmake -f CMakeFiles/cmTC_cfbce.dir/build.make CMakeFiles/cmTC_cfbce.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_cfbce.dir/CheckIncludeFile.cxx.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_cfbce.dir/CheckIncludeFile.cxx.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.cxx Linking CXX executable cmTC_cfbce /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_cfbce.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_cfbce.dir/CheckIncludeFile.cxx.o -o cmTC_cfbce gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the rint exist passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_9ff46/fast && /usr/bin/gmake -f CMakeFiles/cmTC_9ff46.dir/build.make CMakeFiles/cmTC_9ff46.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_9ff46.dir/CheckSymbolExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_9ff46.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c Linking C executable cmTC_9ff46 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_9ff46.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_9ff46.dir/CheckSymbolExists.c.o -o cmTC_9ff46 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' File /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: /* */ #include int main(int argc, char** argv) { (void)argv; #ifndef rint return ((int*)(&rint))[argc]; #else (void)argc; return 0; #endif } Determining if the snprintf exist passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_25297/fast && /usr/bin/gmake -f CMakeFiles/cmTC_25297.dir/build.make CMakeFiles/cmTC_25297.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_25297.dir/CheckSymbolExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_25297.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c Linking C executable cmTC_25297 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_25297.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_25297.dir/CheckSymbolExists.c.o -o cmTC_25297 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' File /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: /* */ #include int main(int argc, char** argv) { (void)argv; #ifndef snprintf return ((int*)(&snprintf))[argc]; #else (void)argc; return 0; #endif } Determining if the strcasecmp exist passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_6d4d5/fast && /usr/bin/gmake -f CMakeFiles/cmTC_6d4d5.dir/build.make CMakeFiles/cmTC_6d4d5.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_6d4d5.dir/CheckSymbolExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_6d4d5.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c Linking C executable cmTC_6d4d5 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_6d4d5.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_6d4d5.dir/CheckSymbolExists.c.o -o cmTC_6d4d5 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' File /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: /* */ #include int main(int argc, char** argv) { (void)argv; #ifndef strcasecmp return ((int*)(&strcasecmp))[argc]; #else (void)argc; return 0; #endif } Determining if the strncasecmp exist passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_21954/fast && /usr/bin/gmake -f CMakeFiles/cmTC_21954.dir/build.make CMakeFiles/cmTC_21954.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_21954.dir/CheckSymbolExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_21954.dir/CheckSymbolExists.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c Linking C executable cmTC_21954 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_21954.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_21954.dir/CheckSymbolExists.c.o -o cmTC_21954 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' File /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: /* */ #include int main(int argc, char** argv) { (void)argv; #ifndef strncasecmp return ((int*)(&strncasecmp))[argc]; #else (void)argc; return 0; #endif } Determining if the function dlopen exists in the dl passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_db492/fast && /usr/bin/gmake -f CMakeFiles/cmTC_db492.dir/build.make CMakeFiles/cmTC_db492.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_db492.dir/CheckFunctionExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=dlopen -o CMakeFiles/cmTC_db492.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c Linking C executable cmTC_db492 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_db492.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=dlopen -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_db492.dir/CheckFunctionExists.c.o -o cmTC_db492 -ldl gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file sys/types.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_39986/fast && /usr/bin/gmake -f CMakeFiles/cmTC_39986.dir/build.make CMakeFiles/cmTC_39986.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_39986.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_39986.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_39986 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_39986.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_39986.dir/CheckIncludeFile.c.o -o cmTC_39986 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file stdint.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_c8bb8/fast && /usr/bin/gmake -f CMakeFiles/cmTC_c8bb8.dir/build.make CMakeFiles/cmTC_c8bb8.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_c8bb8.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_c8bb8.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_c8bb8 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_c8bb8.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_c8bb8.dir/CheckIncludeFile.c.o -o cmTC_c8bb8 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining if the include file stddef.h exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_bac41/fast && /usr/bin/gmake -f CMakeFiles/cmTC_bac41.dir/build.make CMakeFiles/cmTC_bac41.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_bac41.dir/CheckIncludeFile.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_bac41.dir/CheckIncludeFile.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/CheckIncludeFile.c Linking C executable cmTC_bac41 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_bac41.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_bac41.dir/CheckIncludeFile.c.o -o cmTC_bac41 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Determining size of clock_t passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_017ae/fast && /usr/bin/gmake -f CMakeFiles/cmTC_017ae.dir/build.make CMakeFiles/cmTC_017ae.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_017ae.dir/CLOCK_T.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -o CMakeFiles/cmTC_017ae.dir/CLOCK_T.c.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CheckTypeSize/CLOCK_T.c Linking C executable cmTC_017ae /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_017ae.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_017ae.dir/CLOCK_T.c.o -o cmTC_017ae gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Performing C++ SOURCE FILE Test HAVE_GCC_VISIBILITY succeeded with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_8c538/fast && /usr/bin/gmake -f CMakeFiles/cmTC_8c538.dir/build.make CMakeFiles/cmTC_8c538.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_8c538.dir/src.cxx.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -DHAVE_GCC_VISIBILITY -Werror -fvisibility=hidden -o CMakeFiles/cmTC_8c538.dir/src.cxx.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/src.cxx Linking CXX executable cmTC_8c538 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_8c538.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -DHAVE_GCC_VISIBILITY -Werror -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_8c538.dir/src.cxx.o -o cmTC_8c538 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Source file was: int main() { return 0; } Performing C++ SOURCE FILE Test HAVE_STD_SHARED_PTR succeeded with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_90eba/fast && /usr/bin/gmake -f CMakeFiles/cmTC_90eba.dir/build.make CMakeFiles/cmTC_90eba.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_90eba.dir/src.cxx.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -DHAVE_STD_SHARED_PTR -Werror -o CMakeFiles/cmTC_90eba.dir/src.cxx.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/src.cxx Linking CXX executable cmTC_90eba /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_90eba.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -DHAVE_STD_SHARED_PTR -Werror -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_90eba.dir/src.cxx.o -o cmTC_90eba gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Source file was: #include int main(){ std::shared_ptr p; return 0; } Performing C++ SOURCE FILE Test HAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER succeeded with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_a2485/fast && /usr/bin/gmake -f CMakeFiles/cmTC_a2485.dir/build.make CMakeFiles/cmTC_a2485.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_a2485.dir/src.cxx.o /usr/bin/x86_64-gentoo-linux-musl-g++ -DNDEBUG -O2 -pipe -march=native -DHAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -Werror -o CMakeFiles/cmTC_a2485.dir/src.cxx.o -c /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp/src.cxx Linking CXX executable cmTC_a2485 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_a2485.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-g++ -O2 -pipe -march=native -DHAVE_STD_TR1_SHARED_PTR_IN_TR1_HEADER -Werror -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_a2485.dir/src.cxx.o -o cmTC_a2485 gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Source file was: #include int main(){ std::tr1::shared_ptr p; return 0; } Determining if the function getopt exists passed with the following output: Change Dir: /var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp Run Build Command(s):/usr/bin/gmake cmTC_ce2bc/fast && /usr/bin/gmake -f CMakeFiles/cmTC_ce2bc.dir/build.make CMakeFiles/cmTC_ce2bc.dir/build gmake[1]: Entering directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_ce2bc.dir/CheckFunctionExists.c.o /usr/bin/x86_64-gentoo-linux-musl-gcc -DNDEBUG -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=getopt -Werror -o CMakeFiles/cmTC_ce2bc.dir/CheckFunctionExists.c.o -c /usr/share/cmake/Modules/CheckFunctionExists.c Linking C executable cmTC_ce2bc /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_ce2bc.dir/link.txt --verbose=1 /usr/bin/x86_64-gentoo-linux-musl-gcc -O2 -pipe -march=native -DCHECK_FUNCTION_EXISTS=getopt -Werror -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -rdynamic CMakeFiles/cmTC_ce2bc.dir/CheckFunctionExists.c.o -o cmTC_ce2bc gmake[1]: Leaving directory '/var/tmp/portage/sci-chemistry/openbabel-perl-2.4.1/work/openbabel-perl-2.4.1_build/CMakeFiles/CMakeTmp'