Go to:
Gentoo Home
Documentation
Forums
Lists
Bugs
Planet
Store
Wiki
Get Gentoo!
Gentoo's Bugzilla – Attachment 629904 Details for
Bug 716172
sci-biology/rmblast-1.2-r1 : /.../ncbi_stack_linux.cpp: fatal error: execinfo.h: No such file or directory
Home
|
New
–
[Ex]
|
Browse
|
Search
|
Privacy Policy
|
[?]
|
Reports
|
Requests
|
Help
|
New Account
|
Log In
[x]
|
Forgot Password
Login:
[x]
sci-biology:rmblast-1.2-r1:20200404-113853.log
sci-biology:rmblast-1.2-r1:20200404-113853.log (text/plain), 143.39 KB, created by
Toralf Förster
on 2020-04-04 13:03:35 UTC
(
hide
)
Description:
sci-biology:rmblast-1.2-r1:20200404-113853.log
Filename:
MIME Type:
Creator:
Toralf Förster
Created:
2020-04-04 13:03:35 UTC
Size:
143.39 KB
patch
obsolete
> * Package: sci-biology/rmblast-1.2-r1 > * Repository: gentoo > * Maintainer: sci-biology@gentoo.org > * USE: abi_x86_64 amd64 elibc_musl kernel_linux userland_GNU > * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz to /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>>> Unpacking rmblast-1.2-gcc47.patch.bz2 to /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>>> Source unpacked in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work >>>> Preparing source in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++ ... > * Applying rmblast-1.2-gcc47.patch ... > [ ok ] >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++ ... >configure: loading site script /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/config.site > >configure: creating cache config.cache >checking build system type... x86_64-unknown-linux-gnu >checking host system type... x86_64-unknown-linux-gnu >checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c >checking for gcc... x86_64-gentoo-linux-musl-gcc >checking for C compiler default output file name... a.out >checking whether the C compiler works... yes >checking whether we are cross compiling... no >checking for suffix of executables... >checking for suffix of object files... o >checking whether we are using the GNU C compiler... yes >checking whether x86_64-gentoo-linux-musl-gcc accepts -g... yes >checking for x86_64-gentoo-linux-musl-gcc option to accept ANSI C... none needed >checking whether we are using the GNU C++ compiler... yes >checking whether x86_64-gentoo-linux-musl-g++ accepts -g... yes >adjusted C compiler: /usr/bin/x86_64-gentoo-linux-musl-gcc >adjusted C++ compiler: /usr/bin/x86_64-gentoo-linux-musl-g++ >checking whether /usr/bin/x86_64-gentoo-linux-musl-gcc supports -Wl,-E... yes >checking whether ln -s works... yes >checking for ranlib... ranlib >checking for ar... ar cr >checking ranlib's effectiveness... neutral >checking for lorder... echo >checking for tsort... tsort >checking for ccache... ccache >checking for tail... /usr/bin/tail >checking whether /usr/bin/tail accepts modern syntax (-n N)... yes >checking for egrep... grep -E >checking how to run grep -E quietly... grep -E -q >checking for valgrind... no >checking how to run the C++ preprocessor... /usr/bin/x86_64-gentoo-linux-musl-g++ -E >checking for ANSI C header files... yes >checking for sys/types.h... yes >checking for sys/stat.h... yes >checking for stdlib.h... yes >checking for string.h... yes >checking for memory.h... yes >checking for strings.h... yes >checking for inttypes.h... yes >checking for stdint.h... yes >checking for unistd.h... yes >checking for size_t... yes >checking for size_t... (cached) yes >checking size of size_t... 8 >musl libc (x86_64) >Version 1.2.0 >Dynamic Program Loader >Usage: ldd [options] [--] pathname >checking for amq... no >checking whether /usr/bin/x86_64-gentoo-linux-musl-gcc supports -Wl,--no-allow-shlib-undefined... yes >checking how to run the C preprocessor... /usr/bin/x86_64-gentoo-linux-musl-gcc -E >checking whether cross-directory hard links work... yes >checking iostream usability... yes >checking iostream presence... yes >checking for iostream... yes >checking iostream.h usability... no >checking iostream.h presence... no >checking for iostream.h... no >checking fstream usability... yes >checking fstream presence... yes >checking for fstream... yes >checking fstream.h usability... no >checking fstream.h presence... no >checking for fstream.h... no >checking strstream usability... yes >checking strstream presence... yes >checking for strstream... yes >checking strstream.h usability... no >checking strstream.h presence... no >checking for strstream.h... no >checking strstrea.h usability... no >checking strstrea.h presence... no >checking for strstrea.h... no >checking for inttypes.h... (cached) yes >checking limits usability... yes >checking limits presence... yes >checking for limits... yes >checking for unistd.h... (cached) yes >checking windows.h usability... no >checking windows.h presence... no >checking for windows.h... no >checking for wstring... yes >checking for socklen_t... yes >checking atomic.h usability... no >checking atomic.h presence... no >checking for atomic.h... no >checking dlfcn.h usability... yes >checking dlfcn.h presence... yes >checking for dlfcn.h... yes >checking ieeefp.h usability... no >checking ieeefp.h presence... no >checking for ieeefp.h... no >checking poll.h usability... yes >checking poll.h presence... yes >checking for poll.h... yes >checking sys/mount.h usability... yes >checking sys/mount.h presence... yes >checking for sys/mount.h... yes >checking sys/sockio.h usability... no >checking sys/sockio.h presence... no >checking for sys/sockio.h... no >checking sys/statvfs.h usability... yes >checking sys/statvfs.h presence... yes >checking for sys/statvfs.h... yes >checking sys/sysinfo.h usability... yes >checking sys/sysinfo.h presence... yes >checking for sys/sysinfo.h... yes >checking sys/vfs.h usability... yes >checking sys/vfs.h presence... yes >checking for sys/vfs.h... yes >checking arpa/inet.h usability... yes >checking arpa/inet.h presence... yes >checking for arpa/inet.h... yes >checking errno.h usability... yes >checking errno.h presence... yes >checking for errno.h... yes >checking malloc.h usability... yes >checking malloc.h presence... yes >checking for malloc.h... yes >checking netdb.h usability... yes >checking netdb.h presence... yes >checking for netdb.h... yes >checking netinet/in.h usability... yes >checking netinet/in.h presence... yes >checking for netinet/in.h... yes >checking netinet/tcp.h usability... yes >checking netinet/tcp.h presence... yes >checking for netinet/tcp.h... yes >checking paths.h usability... yes >checking paths.h presence... yes >checking for paths.h... yes >checking signal.h usability... yes >checking signal.h presence... yes >checking for signal.h... yes >checking sys/ioctl.h usability... yes >checking sys/ioctl.h presence... yes >checking for sys/ioctl.h... yes >checking sys/select.h usability... yes >checking sys/select.h presence... yes >checking for sys/select.h... yes >checking sys/socket.h usability... yes >checking sys/socket.h presence... yes >checking for sys/socket.h... yes >checking sys/time.h usability... yes >checking sys/time.h presence... yes >checking for sys/time.h... yes >checking wchar.h usability... yes >checking wchar.h presence... yes >checking for wchar.h... yes >checking whether time.h and sys/time.h may both be included... yes >checking for gethostbyname_r... 6 >checking for gethostbyaddr_r... 8 >checking for getservbyname_r... 6 >checking for getpwuid_r... 5 >checking for getlogin_r... yes >checking for localtime_r... yes >checking for pthread_setconcurrency... yes >checking for pthread_atfork... yes >checking return type of localtime_r... struct >checking for library containing sched_yield... none required >checking whether pthread mutexes are available... yes >checking for vprintf... yes >checking for _doprnt... no >checking for euidaccess... yes >checking for atoll... yes >checking for basename... yes >checking for lchown... yes >checking for fseeko... yes >checking for getpagesize... yes >checking for getpwuid... yes >checking for getrusage... yes >checking for gettimeofday... yes >checking for getuid... yes >checking for readpassphrase... no >checking for readv... yes >checking for nanosleep... yes >checking for asprintf... yes >checking for vasprintf... yes >checking for vsnprintf... yes >checking for select... yes >checking for statfs... yes >checking for statvfs... yes >checking for strcasecmp... yes >checking for strlcat... yes >checking for strlcpy... yes >checking for strdup... yes >checking for strndup... yes >checking for strtok_r... yes >checking for sysmp... no >checking for timegm... yes >checking for utimes... yes >checking for lutimes... yes >checking for writev... yes >checking return type of signal handlers... void >checking whether select updates the timeout when interrupted... no >checking whether strcasecmp treats letters as lowercase... yes >checking for Linux-like sysinfo with 1 arg... yes >checking for getloadavg... yes >checking for readdir_r... 3 >checking for an ANSI C-conforming const... yes >checking whether byte ordering is bigendian... no >checking whether char is unsigned... no >checking for char... yes >checking size of char... 1 >checking for double... yes >checking size of double... 8 >checking for float... yes >checking size of float... 4 >checking for int... yes >checking size of int... 4 >checking for long... yes >checking size of long... 8 >checking for long double... yes >checking size of long double... 16 >checking for long long... yes >checking size of long long... 8 >checking for short... yes >checking size of short... 2 >checking for void*... yes >checking size of void*... 8 >checking for __int64... no >checking size of __int64... 0 >checking for intptr_t... yes >checking for uintptr_t... yes >checking for struct sockaddr_in.sin_len... no >checking for struct tm.tm_zone... yes >checking for struct tm.__tm_zone... yes >checking whether function prototypes can use throw(...)... yes >checking for obsolete string::compare() syntax... no >checking whether the auto_ptr template class works... yes >checking for min/max templates... yes >checking whether new C++ streams have ios_base::... yes >checking for ios(_base)::register_callback... yes >checking whether C++ streams delete their buffers... no >checking for std::char_traits::... yes >checking for std::is_sorted<> in <algorithm>... yes >checking for SysV semaphores... yes >checking for union semun... no >checking which way the stack grows... down >checking whether the preprocessor supports C99-style variadic macros... yes >checking whether the preprocessor supports GNU-style variadic macros... yes >checking syntax for marking deprecated functions... __attribute__((__deprecated__)) >checking how to force inlining... inline __attribute__((always_inline)) >checking whether the C compiler supports __attribute__((destructor))... yes >checking whether /usr/bin/x86_64-gentoo-linux-musl-gcc supports __attribute__((visibility("default")))... (cached) unnecessary >checking whether the C compiler supports C99 restrict... restrict >checking whether the C++ compiler supports C99 restrict... __restrict__ >checking whether FIONBIO requires BSD_COMP to be defined... no >checking whether INADDR_NONE is defined... yes >checking whether unaligned reads are permissible... yes >checking for gethostbyname in -lnsl... yes >checking for connect in -lsocket... no >checking for res_search in -lresolv... yes >checking for inet_ntoa_r... no >checking for getaddrinfo... yes >checking for getnameinfo... yes >checking for freehostent... no >checking for gethostent_r... no >checking for getipnodebyaddr... no >checking for getipnodebyname... no >checking for inet_ntop... yes >checking for erf... yes >checking for library containing kstat_open... no >checking for library containing rstat... no >checking for library containing setkey... none required >checking for library containing dlopen... none required >checking for library containing uuid_generate... -luuid >checking for library containing clock_gettime... none required >checking for library containing cplus_demangle... no >checking for library containing iconv... none required >checking for iconv declaration... > extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); >checking for libz... yes >checking for libbz2... yes >checking for liblzo2... yes >checking for libpcre... yes >checking for libgnutls-config... no >checking for libgnutls... yes >checking for libssl... yes >checking for reentrant Sybase libraries... no >checking for Sybase in ... no >checking for FreeTDS in /netopt/Sybase/clients-mssql/current... no >checking for mysql_config... /usr/bin/mysql_config >checking whether MySQL works... yes >checking for Berkeley DB libraries in /BerkeleyDB... yes >checking Berkeley DB version (4.3 or newer required)... >configure: WARNING: Untested Berkeley DB version; may prove incompatible. >configure: WARNING: If so, please re-run this script with the flag --without-bdb. >checking for native Berkeley DB C++ wrappers (optional)... no >checking for python... /usr/bin/python >checking for python2.3... no >checking for python2.4... no >checking for python2.5... no >checking for CPPUNIT in /cppunit... no >checking Boost version... >configure: WARNING: Untested Boost version; may prove incompatible. >configure: WARNING: If so, please re-run this script with the flag --without-boost. >checking for Boost library name tag... -gcc93-d (autodetected) >checking for Boost.Regex in /usr/include/boost... no >checking for Boost.Spirit in /usr/include/boost... yes >checking for Boost.Test in /usr/include/boost... included-only >checking for Boost.Threads in /usr/include/boost... no >checking for the NCBI C toolkit in ... no >checking for X... libraries , headers >checking for gethostbyname... yes >checking for connect... yes >checking for remove... yes >checking for shmat... yes >checking for IceConnectionNumber in -lICE... yes >checking for XextCreateExtension in -lXext... yes >checking for XtMainLoop in -lXt... yes >checking for XmuMakeAtom in -lXmu... yes >checking for OpenGL... no >checking for FLTK in /fltk... no >checking for wxWindows in /wxwin... no >checking for wx-config... no >checking for wxWidgets in /wxwidgets... no >checking for FastCGI libraries in /fcgi-current... yes >checking for FCGX_Accept_r... yes >checking for NCBI SSS directories in /sss/BUILD... no >checking for SP directories in /SP... no >checking for ORBacus in /corba/OB-4.0.1... no >checking for ICU in /usr... yes >checking for libexpat... yes >checking for libsablot... no >checking for libxml2... yes >checking for libxslt... yes >checking for Xerces-C++... no >checking for Xalan-C++... no >checking for libsqlite... no >checking for libsqlite3... yes >checking sqlite3async.h usability... no >checking sqlite3async.h presence... no >checking for sqlite3async.h... no >checking for sqlite3_unlock_notify... yes >checking for liboechem... no >checking for libdrmaa... no >checking for libmuparser... yes >checking for libhdf5_cpp... no >checking for libjpeg... yes >checking for libpng... yes >checking for libtiff... yes >checking for libungif... no >checking for libgif... no >checking for libXpm... yes >checking for freetype-config... no >configure: looking for configurables below /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++... >configure: ...done >updating cache config.cache >configure: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/status/config.status >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib/Makefile.precompile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib/ncbicfg.c >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/alnmgr/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/align_format/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/cache/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/id2/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/pubseq/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/id1/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/pubseq2/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/genbank/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/data_loaders/blastdb/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/format/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/cleanup/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/readers/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/services/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/services/unit_test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/blastdb_format/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/seqdb_reader/demo/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/seqdb_reader/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/gene_info_reader/demo/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/gene_info_reader/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/gene_info_reader/unit_test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/seqdb_writer/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/seqdb_writer/unit_test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/blast/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/seqmasks_io/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objtools/simple/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/xregexp/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/sequtil/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/tables/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/compress/zlib/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/compress/bzip2/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/compress/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/creaders/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/bitset/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/util/regexp/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/dustmask/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/format/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/dbindex/makeindex/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/dbindex/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/composition_adjustment/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/blastinput/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/blastinput/unit_test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/dbindex_search/srsearch/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/dbindex_search/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/api/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/core/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/unit_tests/seqdb_reader/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/unit_tests/blast_format/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/unit_tests/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/unit_tests/api/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/blast/unit_tests/blastdb/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/winmask/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/algo/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/html/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/serial/datatool/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/serial/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.app.tmpl >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/relocate.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/config.h >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/install.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.rules_with_autodep >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.lib >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.app >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/check.cfg >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.lib.tmpl >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/run_sybase_app.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.top_builddir >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.meta >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/build-system/project_tree_builder/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.dll >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/reconfigure.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/new_module.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.is_dll_support >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.both >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.rules >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/sysdep.sh >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/build-system/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.null >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.mk >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seqcode/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/entrez2/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/biotree/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/general/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/mla/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/cdd/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/pcsubstance/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/medlars/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/ncbimime/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/entrezgene/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/docsum/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/biblio/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seqtest/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seqsplit/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/valerr/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seqset/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/omssa/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/scoremat/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seq/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/mmdb/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/submit/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/taxon1/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/medline/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/pub/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/id2/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/taxon3/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/cn3d/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/seqedit/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/blast/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/mim/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/access/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/homologene/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/id1/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/remap/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/tinyseq/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/featdef/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/genomecoll/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/proj/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/insdseq/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/valid/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/blastxml/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/blastdb/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/pubmed/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/pcassay/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/objprt/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objects/gbseq/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/dustmasker/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/blast/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/winmasker/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/segmasker/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/app/blastdb/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/connect/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/connect/ext/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objmgr/util/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objmgr/util/unit_test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objmgr/split/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/objmgr/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/dbapi/cache/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/dbapi/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/dbapi/driver/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/dbapi/driver/odbc/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/cgi/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/./Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/inc/ncbiconf_unix.h >config.status: executing default commands >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib/ncbicfg.c is updated >Prebuilt project_tree_builder not found >=============================================================================== >NCBI C++ Toolkit documentation: doc/index.html, doc/config.html#ref_Running >For the available configuration flags run: ./configure --help > >CFLAGS = -Wall -Wno-format-y2k -pthread -O2 -pipe -march=native -fPIC >CXXFLAGS = -Wall -Wno-format-y2k -pthread -O2 -pipe -march=native -fPIC >CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE >LDFLAGS = -Wl,-rpath,/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0 -pthread -Wl,-O1 -Wl,--defsym=__gentoo_check_ldflags__=0 -O > >LIBRARIES: build as dynamic by default >FEATURES: MT DLL DLL_BUILD unix WinMain Linux >PACKAGES: > enabled: UUID Z BZ2 LZO PCRE GNUTLS OPENSSL MySQL BerkeleyDB Boost.Spirit Boost.Test.Included Fast-CGI ICU EXPAT LIBXML LIBXSLT SQLITE3 MUPARSER JPEG PNG TIFF XPM > disabled: LocalZ LocalBZ2 LocalPCRE Sybase DBLib FreeTDS BerkeleyDB++ ODBC PYTHON PYTHON23 PYTHON24 PYTHON25 CPPUNIT Boost.Regex Boost.Test Boost.Threads C-Toolkit OpenGL MESA GLUT FLTK wxWindows wxWidgets wx2.8 LocalSSS LocalNCBILS LocalMSGMAIL2 SSSUTILS SSSDB SP ORBacus SABLOT Xerces Xalan SQLITE SQLITE3ASYNC OECHEM SGE HDF5 UNGIF GIF FreeType >PROJECTS: > enabled: cgi local_lbsm connext ncbi_crypt serial objects dbapi app algo > disabled: bdb ctools gui gbench > >Tools / flags / paths: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.mk >Configuration header: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/inc/ncbiconf_unix.h > >To build everything: cd /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build && make all_r >or simply run make in the current directory > > >******* CONFIGURATION SUCCESSFUL ******* >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++ ... >make -j1 >if test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.flat; then \ > cd /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build && make -f Makefile.flat; \ >elif test -s ""; then \ > cd /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build && make -j1 all_p; \ >else \ > cd /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build && make -j1 all_r; \ >fi >make[1]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make[2]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/db/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/db/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/db/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/db/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/db/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 db/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/db/Makefile >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/ctools/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/ctools/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/ctools/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/ctools/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/ctools/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 ctools/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/ctools/Makefile >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/misc/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/misc/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/misc/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/misc/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/misc/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 misc/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/misc/Makefile >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/gui/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/gui/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/gui/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/gui/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/gui/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 gui/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/gui/Makefile >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/sample/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/sample/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/sample/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/sample/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/sample/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 sample/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/sample/Makefile >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/internal/Makefile.in] Error 1 (ignored) >make[2]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/internal/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/internal/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/internal/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/internal/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 internal/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/internal/Makefile >make[3]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make[3]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make[3]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[4]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[4]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:39: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/test/Makefile.in] Error 1 (ignored) >make[4]: [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.configurables.real:40: /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/test/Makefile.in] Error 1 (ignored) >mkdir -p `dirname /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/test/Makefile.in` >test -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/test/Makefile.in || cp -p /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/build-system/Makefile.in.skel /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/test/Makefile.in >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/update_configurable.sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64 test/Makefile >config.status: creating /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib/test/Makefile >make[5]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[5]: Nothing to be done for 'all'. >make[5]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[5]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[6]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/resource_info.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_strings.c. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/expr.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/request_control.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/request_ctx.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/version.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/syslog.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/stream_utils.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/rwstreambuf.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/plugin_manager_store.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/plugin_manager.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/obj_store.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbitime.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbithr.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbistre.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbistr.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbireg.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiobj.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbimtx.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbimempool.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbifile.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiexpt.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiexec.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbienv.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbidll.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbidiag_p.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbidiag.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbidbg.cpp. >Updating dependency information for ncbicfg.c. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiatomic.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiargs.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbiapp.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_system.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp. >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp:45: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack_linux.cpp:33:10: fatal error: execinfo.h: No such file or directory > 33 | #include <execinfo.h> > | ^~~~~~~~~~~~ >compilation terminated. >FAILED COMMAND: ccache /usr/bin/x86_64-gentoo-linux-musl-g++ -M -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/inc -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp | sed ... >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_signal.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_safe_static.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_process.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_param.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_config.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/metareg.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/env_reg.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ddumpable.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp. >Updating dependency information for /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp. >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp:45: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack_linux.cpp:33:10: fatal error: execinfo.h: No such file or directory > 33 | #include <execinfo.h> > | ^~~~~~~~~~~~ >compilation terminated. >FAILED COMMAND: ccache /usr/bin/x86_64-gentoo-linux-musl-g++ -M -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/inc -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/ncbi_stack.cpp | sed ... >ccache /usr/bin/x86_64-gentoo-linux-musl-g++ -c -Wall -Wno-format-y2k -pthread -O2 -pipe -march=native -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/inc -I/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp -o blob_storage.o >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbithr_conf.hpp:46, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbimtx.hpp:59, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:70, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/include/sys/errno.h:1:2: warning: #warning redirecting incorrect #include <sys/errno.h> to <errno.h> [-Wcpp] > 1 | #warning redirecting incorrect #include <sys/errno.h> to <errno.h> > | ^~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:1758:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1758 | auto_ptr<TProperties> m_Properties; // Per-thread properties > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:1759:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1759 | auto_ptr<CDiagBuffer> m_DiagBuffer; // Thread's diag buffer > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:1765:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1765 | auto_ptr<SRequestCtxWrapper> m_RequestCtx; // Request context > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:1766:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1766 | auto_ptr<SRequestCtxWrapper> m_DefaultRequestCtx; // Default request context > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2116:13: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2116 | mutable auto_ptr<CEncodedString> m_Host; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2118:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2118 | auto_ptr<CEncodedString> m_Username; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2119:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2119 | auto_ptr<CEncodedString> m_AppName; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2124:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2124 | auto_ptr<CStopWatch> m_StopWatch; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2125:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2125 | auto_ptr<TMessages> m_Messages; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2130:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2130 | auto_ptr<CRequestRateControl> m_AppLogRC; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2131:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2131 | auto_ptr<CRequestRateControl> m_ErrLogRC; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2132:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2132 | auto_ptr<CRequestRateControl> m_TraceLogRC; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:2330:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2330 | auto_ptr<TMessages> m_Messages; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_stack.hpp:97:13: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 97 | mutable auto_ptr<CStackTraceImpl> m_Impl; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:806:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 806 | auto_ptr<CStackTrace> m_StackTrace; ///< Saved stack trace > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp: In member function âncbi::IStringDecoder* ncbi::CStringPairs<TContainer>::GetEncoder()â: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:2826:60: error: cannot convert âncbi::AutoPtr<ncbi::IStringEncoder>::element_type*â {aka âncbi::IStringEncoder*â} to âncbi::IStringDecoder*â in return > 2826 | IStringDecoder* GetEncoder(void) { return m_Encoder.get(); } > | ~~~~~~~~~~~~~^~ > | | > | ncbi::AutoPtr<ncbi::IStringEncoder>::element_type* {aka ncbi::IStringEncoder*} >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp: At global scope: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:2985:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2985 | auto_ptr<string> m_Encoded; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:70, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbimtx.hpp:924:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 924 | auto_ptr<CInternalRWLock> m_RW; ///< Platform-dependent RW-lock data > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiargs.hpp: In member function âncbi::CArgs* ncbi::CArgDescriptions::CreateArgs(TSize, TArray) constâ: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiargs.hpp:960:9: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 960 | auto_ptr<CArgs> args(new CArgs()); > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp: At global scope: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:508:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 508 | auto_ptr<CNcbiEnvironment> m_Environ; ///< Cached application env. > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:510:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 510 | auto_ptr<CNcbiOstream> m_DiagStream; ///< Opt., aux., see eDS_ToMemory > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:511:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 511 | auto_ptr<CNcbiArguments> m_Arguments; ///< Command-line arguments > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:512:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 512 | auto_ptr<CArgDescriptions> m_ArgDesc; ///< Cmd.-line arg descriptions > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_param.hpp:41, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:49, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiapp.hpp:513:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 513 | auto_ptr<CArgs> m_Args; ///< Parsed cmd.-line args > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:1810:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1810 | auto_ptr<CNcbiIstream> m_InFile; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:1811:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 1811 | auto_ptr<CNcbiOstream> m_OutFile; > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp: In function âTFindFunc ncbi::FindFilesInDir(const ncbi::CDir&, const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, TFindFunc&, ncbi::TFindFiles)â: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:2402:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2402 | auto_ptr<CDir::TEntries> > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidll.hpp:40, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:72, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp: In function âTFindFunc ncbi::FindFilesInDir(const ncbi::CDir&, const ncbi::CMask&, const ncbi::CMask&, TFindFunc&, ncbi::TFindFiles)â: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbifile.hpp:2454:5: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 2454 | auto_ptr<CDir::TEntries> > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >In file included from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_config.hpp:36, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/plugin_manager.hpp:73, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_tree.hpp: In member function âncbi::CTreeNode<TValue, TKeyGetter>::TTreeType* ncbi::CTreeNode<TValue, TKeyGetter>::FindOrCreateNode(const TKeyList&)â: >/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbi_tree.hpp:821:13: warning: âtemplate<class> class std::auto_ptrâ is deprecated [-Wdeprecated-declarations] > 821 | auto_ptr<TTreeType> node( new CTreeNode<TValue, TKeyGetter> ); > | ^~~~~~~~ >In file included from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/locale_conv.h:41, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/locale:43, > from /usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/iomanip:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistre.hpp:88, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbidiag.hpp:43, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbiexpt.hpp:42, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/tempstr.hpp:39, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistr.hpp:38, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/ncbistd.hpp:37, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/include/corelib/blob_storage.hpp:35, > from /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib/blob_storage.cpp:33: >/usr/lib/gcc/x86_64-gentoo-linux-musl/9.3.0/include/g++-v9/bits/unique_ptr.h:53:28: note: declared here > 53 | template<typename> class auto_ptr; > | ^~~~~~~~ >make[6]: *** [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.rules:18: blob_storage.o] Error 1 >make[6]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[6]: Entering directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >rm -f libxncbi.so .xncbi.dep .libxncbi.so.stamp >if [ '/bin/sh /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/scripts/common/impl/if_diff.sh "ln -f"' != '@:' -a -d /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/status -a -w /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/status -a /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/src/corelib != . ]; then \ > rm -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/lib/libxncbi.so /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/lib/libxncbi.so \ > /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/status/.xncbi.dep /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/status/.xncbi.dep; \ > [ '@# ' = '@# ' ] || \ > rm -f /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/lib/libxncbi.so /var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/lib/libxncbi.so; \ >fi >make[6]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[5]: *** [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.meta:196: all.nonusr] Error 2 >make[5]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[4]: *** [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.meta:183: all.real] Error 2 >make[4]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[3]: *** [/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/Makefile.meta:241: all_r.needs-reqs] Error 2 >make[3]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build/corelib' >make[2]: *** [Makefile.meta:292: all_r.real] Error 5 >make[2]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make[1]: *** [Makefile.meta:241: all_r.needs-reqs] Error 2 >make[1]: Leaving directory '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++/GCC930-ReleaseMTDLL64/build' >make: *** [Makefile:22: all] Error 2 > * ERROR: sci-biology/rmblast-1.2-r1::gentoo failed (compile phase): > * emake failed > * > * If you need support, post the output of `emerge --info '=sci-biology/rmblast-1.2-r1::gentoo'`, > * the complete build log and the output of `emerge -pqv '=sci-biology/rmblast-1.2-r1::gentoo'`. > * The complete build log is located at '/var/log/portage/sci-biology:rmblast-1.2-r1:20200404-113853.log'. > * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/rmblast-1.2-r1/temp/build.log'. > * The ebuild environment file is located at '/var/tmp/portage/sci-biology/rmblast-1.2-r1/temp/environment'. > * Working directory: '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++' > * S: '/var/tmp/portage/sci-biology/rmblast-1.2-r1/work/rmblast-1.2-ncbi-blast-2.2.23+-src/c++'
You cannot view the attachment while viewing its details because your browser does not support IFRAMEs.
View the attachment on a separate page
.
View Attachment As Raw
Actions:
View
Attachments on
bug 716172
:
629894
|
629896
|
629898
|
629900
|
629902
| 629904