* Package: sci-libs/coinor-alps-1.5.4 * Repository: gentoo * Maintainer: sci@gentoo.org * USE: abi_x86_64 amd64 elibc_musl kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking Alps-1.5.4.tgz to /var/tmp/portage/sci-libs/coinor-alps-1.5.4/work >>> Source unpacked in /var/tmp/portage/sci-libs/coinor-alps-1.5.4/work >>> Preparing source in /var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps ... * econf: updating Alps-1.5.4/Osi/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/Osi/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/Clp/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/Clp/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/Cgl/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/Cgl/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/CoinUtils/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/CoinUtils/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/BuildTools/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/BuildTools/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/Alps/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/Alps/config.guess with /usr/share/gnuconfig/config.guess * econf: updating Alps-1.5.4/config.sub with /usr/share/gnuconfig/config.sub * econf: updating Alps-1.5.4/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-gentoo-linux-musl --host=x86_64-gentoo-linux-musl --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --libdir=/usr/lib --enable-dependency-linking --without-dot --disable-static checking build system type... x86_64-gentoo-linux-musl checking for svnversion... yes checking whether we want to compile in debug mode... no checking for x86_64-gentoo-linux-musl-xlc... no checking for x86_64-gentoo-linux-musl-gcc... x86_64-gentoo-linux-musl-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-gentoo-linux-musl-gcc accepts -g... yes checking for x86_64-gentoo-linux-musl-gcc option to accept ANSI C... none needed configure: C compiler options are: -O2 -pipe -march=native -DALPS_BUILD checking for x86_64-gentoo-linux-musl-xlC_r... no checking for x86_64-gentoo-linux-musl-aCC... no checking for x86_64-gentoo-linux-musl-CC... no checking for x86_64-gentoo-linux-musl-g++... x86_64-gentoo-linux-musl-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-gentoo-linux-musl-g++ accepts -g... yes checking whether C++ compiler x86_64-gentoo-linux-musl-g++ works... yes configure: C++ compiler options are: -O2 -pipe -march=native -DALPS_BUILD checking for egrep... grep -E checking whether ln -s works... yes checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c checking whether build environment is sane... yes checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking dependency style of x86_64-gentoo-linux-musl-gcc... none checking dependency style of x86_64-gentoo-linux-musl-g++... none checking whether to enable maintainer-specific portions of Makefiles... no checking host system type... x86_64-gentoo-linux-musl checking for a sed that does not truncate output... /bin/sed checking for ld used by x86_64-gentoo-linux-musl-gcc... /usr/x86_64-gentoo-linux-musl/bin/ld checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld) is GNU ld... yes checking for /usr/x86_64-gentoo-linux-musl/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking how to recognise dependent libraries... pass_all checking how to run the C preprocessor... x86_64-gentoo-linux-musl-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... x86_64-gentoo-linux-musl-g++ -E checking for x86_64-gentoo-linux-musl-g77... no checking for x86_64-gentoo-linux-musl-f77... no checking for x86_64-gentoo-linux-musl-xlf... no checking for x86_64-gentoo-linux-musl-frt... no checking for x86_64-gentoo-linux-musl-pgf77... no checking for x86_64-gentoo-linux-musl-fort77... no checking for x86_64-gentoo-linux-musl-fl32... no checking for x86_64-gentoo-linux-musl-af77... no checking for x86_64-gentoo-linux-musl-f90... no checking for x86_64-gentoo-linux-musl-xlf90... no checking for x86_64-gentoo-linux-musl-pgf90... no checking for x86_64-gentoo-linux-musl-epcf90... no checking for x86_64-gentoo-linux-musl-f95... no checking for x86_64-gentoo-linux-musl-fort... no checking for x86_64-gentoo-linux-musl-xlf95... no checking for x86_64-gentoo-linux-musl-ifc... no checking for x86_64-gentoo-linux-musl-efc... no checking for x86_64-gentoo-linux-musl-pgf95... no checking for x86_64-gentoo-linux-musl-lf95... no checking for x86_64-gentoo-linux-musl-gfortran... x86_64-gentoo-linux-musl-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-gentoo-linux-musl-gfortran accepts -g... yes checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-gentoo-linux-musl-gcc object... ok checking for objdir... .libs checking for x86_64-gentoo-linux-musl-ar... x86_64-gentoo-linux-musl-ar checking for x86_64-gentoo-linux-musl-ranlib... x86_64-gentoo-linux-musl-ranlib checking for x86_64-gentoo-linux-musl-strip... x86_64-gentoo-linux-musl-strip checking if x86_64-gentoo-linux-musl-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-gentoo-linux-musl-gcc option to produce PIC... -fPIC checking if x86_64-gentoo-linux-musl-gcc PIC flag -fPIC works... yes checking if x86_64-gentoo-linux-musl-gcc static flag -static works... yes checking if x86_64-gentoo-linux-musl-gcc supports -c -o file.o... yes checking whether the x86_64-gentoo-linux-musl-gcc linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by x86_64-gentoo-linux-musl-g++... /usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-gentoo-linux-musl-g++ option to produce PIC... -fPIC checking if x86_64-gentoo-linux-musl-g++ PIC flag -fPIC works... yes checking if x86_64-gentoo-linux-musl-g++ static flag -static works... yes checking if x86_64-gentoo-linux-musl-g++ supports -c -o file.o... yes checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for x86_64-gentoo-linux-musl-gfortran option to produce PIC... -fPIC checking if x86_64-gentoo-linux-musl-gfortran PIC flag -fPIC works... yes checking if x86_64-gentoo-linux-musl-gfortran static flag -static works... yes checking if x86_64-gentoo-linux-musl-gfortran supports -c -o file.o... yes checking whether the x86_64-gentoo-linux-musl-gfortran linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory GNU/Linux ld.so checking how to hardcode library paths into programs... immediate configure: Build is "x86_64-gentoo-linux-musl". checking if library version is set... 8:4:5 checking for x86_64-gentoo-linux-musl-pkg-config... x86_64-gentoo-linux-musl-pkg-config checking pkg-config is at least version 0.16.0... yes checking for COIN-OR package CoinUtils... yes: 2.9.11 checking for COIN-OR package Clp... yes: 0.58.6 1.15.6 checking if user provides library for Mpi... no checking cmath usability... yes checking cmath presence... yes checking for cmath... yes checking cfloat usability... yes checking cfloat presence... yes checking for cfloat... yes checking cieeefp usability... no checking cieeefp presence... no checking for cieeefp... no checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking which command should be used to link input files... ln -s configure: configuring doxygen documentation options checking for doxygen... no checking for latex... no checking for dot ... disabled checking for doxygen doc'n for CoinUtils ... ../CoinUtils/doxydoc (tag) configure: creating ./config.status config.status: creating Makefile config.status: creating examples/Abc/Makefile config.status: creating examples/Abc/abc.par config.status: creating examples/Knap/Makefile config.status: creating examples/Knap/knap.par config.status: creating src/Makefile config.status: creating test/Makefile config.status: creating alps.pc config.status: creating alps-uninstalled.pc config.status: creating doxydoc/doxygen.conf config.status: creating src/config.h config.status: creating src/config_alps.h config.status: linking ./examples/Abc/AbcBranchActual.cpp to test/AbcBranchActual.cpp config.status: linking ./examples/Abc/AbcBranchActual.h to test/AbcBranchActual.h config.status: linking ./examples/Abc/AbcBranchBase.cpp to test/AbcBranchBase.cpp config.status: linking ./examples/Abc/AbcBranchBase.h to test/AbcBranchBase.h config.status: linking ./examples/Abc/AbcCutGenerator.cpp to test/AbcCutGenerator.cpp config.status: linking ./examples/Abc/AbcCutGenerator.h to test/AbcCutGenerator.h config.status: linking ./examples/Abc/AbcHeuristic.cpp to test/AbcHeuristic.cpp config.status: linking ./examples/Abc/AbcHeuristic.h to test/AbcHeuristic.h config.status: linking ./examples/Abc/AbcMain.cpp to test/AbcMain.cpp config.status: linking ./examples/Abc/AbcMessage.cpp to test/AbcMessage.cpp config.status: linking ./examples/Abc/AbcMessage.h to test/AbcMessage.h config.status: linking ./examples/Abc/AbcModel.cpp to test/AbcModel.cpp config.status: linking ./examples/Abc/AbcModel.h to test/AbcModel.h config.status: linking ./examples/Abc/AbcNodeDesc.h to test/AbcNodeDesc.h config.status: linking ./examples/Abc/AbcParams.cpp to test/AbcParams.cpp config.status: linking ./examples/Abc/AbcParams.h to test/AbcParams.h config.status: linking ./examples/Abc/AbcSolution.cpp to test/AbcSolution.cpp config.status: linking ./examples/Abc/AbcSolution.h to test/AbcSolution.h config.status: linking ./examples/Abc/AbcTreeNode.cpp to test/AbcTreeNode.cpp config.status: linking ./examples/Abc/AbcTreeNode.h to test/AbcTreeNode.h config.status: executing depfiles commands configure: In case of trouble, first consult the troubleshooting page at https://projects.coin-or.org/BuildTools/wiki/user-troubleshooting configure: Configuration of Alps successful >>> Source configured. >>> Compiling source in /var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps ... make -j1 all Making all in src make[1]: Entering directory '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps/src' make all-am make[2]: Entering directory '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps/src' /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsSearchStrategy.lo AlpsSearchStrategy.cpp mkdir .libs x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsSearchStrategy.cpp -fPIC -DPIC -o .libs/AlpsSearchStrategy.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsKnowledgeBroker.lo AlpsKnowledgeBroker.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsKnowledgeBroker.cpp -fPIC -DPIC -o .libs/AlpsKnowledgeBroker.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsKnowledge.lo AlpsKnowledge.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsKnowledge.cpp -fPIC -DPIC -o .libs/AlpsKnowledge.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsMessage.lo AlpsMessage.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsMessage.cpp -fPIC -DPIC -o .libs/AlpsMessage.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsModel.lo AlpsModel.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsModel.cpp -fPIC -DPIC -o .libs/AlpsModel.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsParameterBase.lo AlpsParameterBase.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsParameterBase.cpp -fPIC -DPIC -o .libs/AlpsParameterBase.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsParams.lo AlpsParams.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsParams.cpp -fPIC -DPIC -o .libs/AlpsParams.o /bin/sh ../libtool --tag=CXX --mode=compile x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c -o AlpsSubTree.lo AlpsSubTree.cpp x86_64-gentoo-linux-musl-g++ -DHAVE_CONFIG_H -I. -I. -I/usr/include/coin -O2 -pipe -march=native -DALPS_BUILD -c AlpsSubTree.cpp -fPIC -DPIC -o .libs/AlpsSubTree.o AlpsSubTree.cpp: In member function 'AlpsReturnStatus AlpsSubTree::exploreUnitWork(bool, int, double, AlpsExitStatus&, int&, int&, int&, int&, int&, bool&)': AlpsSubTree.cpp:1329:33: error: variable 'AlpsSubTree::exploreUnitWork(bool, int, double, AlpsExitStatus&, int&, int&, int&, int&, int&, bool&)::mallinfo memInfo' has initializer but incomplete type 1329 | struct mallinfo memInfo = mallinfo(); | ^~~~~~~ AlpsSubTree.cpp:1329:52: error: invalid use of incomplete type 'struct AlpsSubTree::exploreUnitWork(bool, int, double, AlpsExitStatus&, int&, int&, int&, int&, int&, bool&)::mallinfo' 1329 | struct mallinfo memInfo = mallinfo(); | ^ AlpsSubTree.cpp:1329:24: note: forward declaration of 'struct AlpsSubTree::exploreUnitWork(bool, int, double, AlpsExitStatus&, int&, int&, int&, int&, int&, bool&)::mallinfo' 1329 | struct mallinfo memInfo = mallinfo(); | ^~~~~~~~ make[2]: *** [Makefile:536: AlpsSubTree.lo] Error 1 make[2]: Leaving directory '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps/src' make[1]: *** [Makefile:409: all] Error 2 make[1]: Leaving directory '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps/src' make: *** [Makefile:479: all-recursive] Error 1 * ERROR: sci-libs/coinor-alps-1.5.4::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=sci-libs/coinor-alps-1.5.4::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-libs/coinor-alps-1.5.4::gentoo'`. * The complete build log is located at '/var/log/portage/sci-libs:coinor-alps-1.5.4:20200402-150110.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/temp/environment'. * Working directory: '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps' * S: '/var/tmp/portage/sci-libs/coinor-alps-1.5.4/work/Alps-1.5.4/Alps'