sci-biology:emboss-6.6.0-r1:20200314-144454.log

sci-biology:emboss-6.6.0-r1:20200314-144454.log (text/plain), 360.75 KB, created by Toralf Förster on 2020-03-14 15:12:15 UTC

 * Package:    sci-biology/emboss-6.6.0-r1
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_musl kernel_linux userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking EMBOSS-6.6.0.tar.gz to /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work
>>> Source unpacked in /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work
>>> Preparing source in /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0 ...
 * Applying emboss-6.6.0_fix-build-system.patch ...
 [ ok ]
 * Applying emboss-6.6.0_FORTIFY_SOURCE-fix.patch ...
 [ ok ]
 * Applying emboss-6.6.0_plplot-declarations.patch ...
 [ ok ]
 * Applying emboss-6.6.0_qa-implicit-declarations.patch ...
 [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0' ...
 * Running libtoolize --install --copy --force --automake ...
 [ ok ]
 * Running aclocal -I m4 ...
 [ ok ]
 * Running autoconf --force ...
 [ ok ]
 * Running autoheader ...
 [ ok ]
 * Running automake --add-missing --copy --force-missing ...
 [ ok ]
 * Running elibtoolize in: EMBOSS-6.6.0/
 *   Applying portage/1.2.0 patch ...
 *   Applying sed/1.5.6 patch ...
 *   Applying as-needed/2.4.3 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0 ...
 * econf: updating EMBOSS-6.6.0/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating EMBOSS-6.6.0/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-gentoo-linux-musl --host=x86_64-gentoo-linux-musl --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --disable-dependency-tracking --disable-silent-rules --docdir=/usr/share/doc/emboss-6.6.0-r1 --htmldir=/usr/share/doc/emboss-6.6.0-r1/html --libdir=/usr/lib --enable-shared --disable-static --without-x --without-pngdriver --without-hpdf --without-mysql --without-postgresql --enable-large --without-java --enable-systemlibs
checking for gawk... gawk
checking for x86_64-gentoo-linux-musl-icc... no
checking for x86_64-gentoo-linux-musl-gcc... x86_64-gentoo-linux-musl-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-gentoo-linux-musl-gcc accepts -g... yes
checking for x86_64-gentoo-linux-musl-gcc option to accept ISO C89... none needed
checking whether x86_64-gentoo-linux-musl-gcc understands -c and -o together... yes
checking for x86_64-gentoo-linux-musl-icpc... no
checking for x86_64-gentoo-linux-musl-g++... x86_64-gentoo-linux-musl-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-gentoo-linux-musl-g++ accepts -g... yes
checking how to run the C preprocessor... x86_64-gentoo-linux-musl-gcc -E
checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c
checking whether ln -s works... yes
checking whether make sets $(MAKE)... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether build environment is sane... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking dependency style of x86_64-gentoo-linux-musl-gcc... none
checking dependency style of x86_64-gentoo-linux-musl-g++... none
checking build system type... x86_64-gentoo-linux-musl
checking host system type... x86_64-gentoo-linux-musl
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-gentoo-linux-musl-gcc... /usr/x86_64-gentoo-linux-musl/bin/ld
checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-gentoo-linux-musl-nm -B
checking the name lister (/usr/bin/x86_64-gentoo-linux-musl-nm -B) interface... BSD nm
checking the maximum length of command line arguments... 98304
checking how to convert x86_64-gentoo-linux-musl file names to x86_64-gentoo-linux-musl format... func_convert_file_noop
checking how to convert x86_64-gentoo-linux-musl file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-gentoo-linux-musl/bin/ld option to reload object files... -r
checking for x86_64-gentoo-linux-musl-objdump... x86_64-gentoo-linux-musl-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-gentoo-linux-musl-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-gentoo-linux-musl-ar... x86_64-gentoo-linux-musl-ar
checking for archiver @FILE support... @
checking for x86_64-gentoo-linux-musl-strip... x86_64-gentoo-linux-musl-strip
checking for x86_64-gentoo-linux-musl-ranlib... x86_64-gentoo-linux-musl-ranlib
checking command to parse /usr/bin/x86_64-gentoo-linux-musl-nm -B output from x86_64-gentoo-linux-musl-gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-gentoo-linux-musl-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
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checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-gentoo-linux-musl-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-gentoo-linux-musl-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-gentoo-linux-musl-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-gentoo-linux-musl-gcc static flag -static works... yes
checking if x86_64-gentoo-linux-musl-gcc supports -c -o file.o... yes
checking if x86_64-gentoo-linux-musl-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-gentoo-linux-musl-gcc linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... x86_64-gentoo-linux-musl-g++ -E
checking for ld used by x86_64-gentoo-linux-musl-g++... /usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-gentoo-linux-musl-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-gentoo-linux-musl-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-gentoo-linux-musl-g++ static flag -static works... yes
checking if x86_64-gentoo-linux-musl-g++ supports -c -o file.o... yes
checking if x86_64-gentoo-linux-musl-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-gentoo-linux-musl-g++ linker (/usr/x86_64-gentoo-linux-musl/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for X... disabled
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for ANSI C header files... (cached) yes
checking for unistd.h... (cached) yes
checking TargetConfig.h usability... no
checking TargetConfig.h presence... no
checking for TargetConfig.h... no
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for pid_t... yes
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking whether getpgrp requires zero arguments... yes
checking for strftime... yes
checking vfork.h usability... no
checking vfork.h presence... no
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checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for vprintf... yes
checking for _doprnt... no
checking for memmove... yes
checking for socket in -lc... yes
checking for main in -lm... yes
checking if docroot is given... no
checking if gcc profiling is selected... no
checking if gcov coverage is selected... no
configure: checking for EMBOSS pre-indexed databases
checking for ./emboss/index/edam.xac... yes
checking for Java JNI... no
checking for Java JNI OS... no
checking for authorisation type... no
checking for threading type... no
checking whether to look for pdf support... no
checking for x86_64-gentoo-linux-musl-pkg-config... /usr/bin/x86_64-gentoo-linux-musl-pkg-config
checking pkg-config is at least version 0.9.0... yes
checking whether to look for axis2c support... no
checking if png driver is wanted... no
checking for large file support... yes
checking for PCRE... yes
checking for EXPAT... yes
checking for ZLIB... yes
checking for PLPLOT... no
checking for PLPLOT... yes
checking for purify... no
checking for cygwin... no
checking for savestats... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating ajax/Makefile
config.status: creating ajax/acd/Makefile
config.status: creating ajax/ajaxdb/Makefile
config.status: creating ajax/core/Makefile
config.status: creating ajax/ensembl/Makefile
config.status: creating ajax/expat/Makefile
config.status: creating ajax/graphics/Makefile
config.status: creating ajax/pcre/Makefile
config.status: creating ajax/zlib/Makefile
config.status: creating doc/Makefile
config.status: creating doc/manuals/Makefile
config.status: creating doc/programs/Makefile
config.status: creating doc/programs/html/Makefile
config.status: creating doc/programs/text/Makefile
config.status: creating doc/tutorials/Makefile
config.status: creating emboss/Makefile
config.status: creating emboss/acd/Makefile
config.status: creating emboss/data/AAINDEX/Makefile
config.status: creating emboss/data/CODONS/Makefile
config.status: creating emboss/data/JASPAR_CNE/Makefile
config.status: creating emboss/data/JASPAR_CORE/Makefile
config.status: creating emboss/data/JASPAR_FAM/Makefile
config.status: creating emboss/data/JASPAR_PBM/Makefile
config.status: creating emboss/data/JASPAR_PBM_HLH/Makefile
config.status: creating emboss/data/JASPAR_PBM_HOMEO/Makefile
config.status: creating emboss/data/JASPAR_PHYLOFACTS/Makefile
config.status: creating emboss/data/JASPAR_POLII/Makefile
config.status: creating emboss/data/JASPAR_SPLICE/Makefile
config.status: creating emboss/data/Makefile
config.status: creating emboss/data/OBO/Makefile
config.status: creating emboss/data/PRINTS/Makefile
config.status: creating emboss/data/PROSITE/Makefile
config.status: creating emboss/data/REBASE/Makefile
config.status: creating emboss/data/TAXONOMY/Makefile
config.status: creating emboss/index/Makefile
config.status: creating jemboss/Makefile
config.status: creating jemboss/runJemboss.sh
config.status: creating jemboss/images/Makefile
config.status: creating jemboss/lib/Makefile
config.status: creating jemboss/lib/axis/Makefile
config.status: creating jemboss/resources/Makefile
config.status: creating jemboss/utils/Makefile
config.status: creating nucleus/Makefile
config.status: creating plplot/Makefile
config.status: creating plplot/lib/Makefile
config.status: creating test/Makefile
config.status: creating test/data/Makefile
config.status: creating test/embl/Makefile
config.status: creating test/genbank/Makefile
config.status: creating test/pir/Makefile
config.status: creating test/swiss/Makefile
config.status: creating test/swnew/Makefile
config.status: creating test/testdb/Makefile
config.status: creating ajax/core/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0 ...
make -j1 
Making all in ajax
make[1]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax'
Making all in core
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core'
make  all-am
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core'
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajalign.lo `test -f 'ajalign.c' || echo './'`ajalign.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajalign.c  -fPIC -DPIC -o .libs/libajax_la-ajalign.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajarr.lo `test -f 'ajarr.c' || echo './'`ajarr.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajarr.c  -fPIC -DPIC -o .libs/libajax_la-ajarr.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajassem.lo `test -f 'ajassem.c' || echo './'`ajassem.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajassem.c  -fPIC -DPIC -o .libs/libajax_la-ajassem.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajassemread.lo `test -f 'ajassemread.c' || echo './'`ajassemread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajassemread.c  -fPIC -DPIC -o .libs/libajax_la-ajassemread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajassemwrite.lo `test -f 'ajassemwrite.c' || echo './'`ajassemwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajassemwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajassemwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajassert.lo `test -f 'ajassert.c' || echo './'`ajassert.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajassert.c  -fPIC -DPIC -o .libs/libajax_la-ajassert.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajbamindex.lo `test -f 'ajbamindex.c' || echo './'`ajbamindex.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajbamindex.c  -fPIC -DPIC -o .libs/libajax_la-ajbamindex.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajbase.lo `test -f 'ajbase.c' || echo './'`ajbase.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajbase.c  -fPIC -DPIC -o .libs/libajax_la-ajbase.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajcall.lo `test -f 'ajcall.c' || echo './'`ajcall.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajcall.c  -fPIC -DPIC -o .libs/libajax_la-ajcall.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajcigar.lo `test -f 'ajcigar.c' || echo './'`ajcigar.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajcigar.c  -fPIC -DPIC -o .libs/libajax_la-ajcigar.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajcod.lo `test -f 'ajcod.c' || echo './'`ajcod.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajcod.c  -fPIC -DPIC -o .libs/libajax_la-ajcod.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajdan.lo `test -f 'ajdan.c' || echo './'`ajdan.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajdan.c  -fPIC -DPIC -o .libs/libajax_la-ajdan.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajdmx.lo `test -f 'ajdmx.c' || echo './'`ajdmx.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajdmx.c  -fPIC -DPIC -o .libs/libajax_la-ajdmx.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajdom.lo `test -f 'ajdom.c' || echo './'`ajdom.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajdom.c  -fPIC -DPIC -o .libs/libajax_la-ajdom.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajdomain.lo `test -f 'ajdomain.c' || echo './'`ajdomain.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajdomain.c  -fPIC -DPIC -o .libs/libajax_la-ajdomain.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajexcept.lo `test -f 'ajexcept.c' || echo './'`ajexcept.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajexcept.c  -fPIC -DPIC -o .libs/libajax_la-ajexcept.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfeat.lo `test -f 'ajfeat.c' || echo './'`ajfeat.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfeat.c  -fPIC -DPIC -o .libs/libajax_la-ajfeat.o
ajfeat.c: In function ‘featFeatType’:
ajfeat.c:2114:11: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration]
 2114 |     while(isspace((ajint)*cp))
      |           ^~~~~~~
ajfeat.c: In function ‘featTagName’:
ajfeat.c:4352:11: warning: implicit declaration of function ‘isalpha’ [-Wimplicit-function-declaration]
 4352 |     while(isalpha((ajint)*cp))
      |           ^~~~~~~
ajfeat.c: In function ‘featTagSpecialAllCitation’:
ajfeat.c:6084:10: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
 6084 |      if(!isdigit((ajint)*cp))
      |          ^~~~~~~
ajfeat.c: In function ‘featTagSpecialAllConssplice’:
ajfeat.c:6291:9: warning: implicit declaration of function ‘islower’ [-Wimplicit-function-declaration]
 6291 |      if(islower((ajint)*cp++))
      |         ^~~~~~~
ajfeat.c: In function ‘featTagSpecialAllProteinid’:
ajfeat.c:7140:34: warning: implicit declaration of function ‘isupper’ [-Wimplicit-function-declaration]
 7140 |        else if(!isalpha(icp) || !isupper(icp))
      |                                  ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfeatread.lo `test -f 'ajfeatread.c' || echo './'`ajfeatread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfeatread.c  -fPIC -DPIC -o .libs/libajax_la-ajfeatread.o
ajfeatread.c: In function ‘featGff3ProcessTagval’:
ajfeatread.c:3139:16: warning: implicit declaration of function ‘isupper’ [-Wimplicit-function-declaration]
 3139 |             if(isupper((int)cp))
      |                ^~~~~~~
ajfeatread.c: In function ‘featEmblOperOut’:
ajfeatread.c:4099:9: warning: implicit declaration of function ‘isalpha’ [-Wimplicit-function-declaration]
 4099 |     if(!isalpha((ajint)*cp)) return ajFalse; /* starts with location */
      |         ^~~~~~~
ajfeatread.c:4100:9: warning: implicit declaration of function ‘islower’ [-Wimplicit-function-declaration]
 4100 |     if(!islower((ajint)*cp)) return ajFalse; /* starts with location */
      |         ^~~~~~~
ajfeatread.c: In function ‘featEmblLoc’:
ajfeatread.c:4371:21: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
 4371 |                 if(!isdigit((ajint) *cp))
      |                     ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfeatwrite.lo `test -f 'ajfeatwrite.c' || echo './'`ajfeatwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfeatwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajfeatwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfile.lo `test -f 'ajfile.c' || echo './'`ajfile.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfile.c  -fPIC -DPIC -o .libs/libajax_la-ajfile.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfiledata.lo `test -f 'ajfiledata.c' || echo './'`ajfiledata.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfiledata.c  -fPIC -DPIC -o .libs/libajax_la-ajfiledata.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfileio.lo `test -f 'ajfileio.c' || echo './'`ajfileio.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfileio.c  -fPIC -DPIC -o .libs/libajax_la-ajfileio.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajfmt.lo `test -f 'ajfmt.c' || echo './'`ajfmt.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfmt.c  -fPIC -DPIC -o .libs/libajax_la-ajfmt.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajftp.lo `test -f 'ajftp.c' || echo './'`ajftp.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajftp.c  -fPIC -DPIC -o .libs/libajax_la-ajftp.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajhttp.lo `test -f 'ajhttp.c' || echo './'`ajhttp.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajhttp.c  -fPIC -DPIC -o .libs/libajax_la-ajhttp.o
ajhttp.c: In function ‘ajHttpUrlrefParseC’:
ajhttp.c:719:6: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration]
  719 |  if (isspace((int) *p))
      |      ^~~~~~~
ajhttp.c: In function ‘ajHttpUrlrefSplitPort’:
ajhttp.c:813:9: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
  813 |     if(!isdigit((int) *p))
      |         ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajindex.lo `test -f 'ajindex.c' || echo './'`ajindex.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajindex.c  -fPIC -DPIC -o .libs/libajax_la-ajindex.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajjava.lo `test -f 'ajjava.c' || echo './'`ajjava.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajjava.c  -fPIC -DPIC -o .libs/libajax_la-ajjava.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajlist.lo `test -f 'ajlist.c' || echo './'`ajlist.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajlist.c  -fPIC -DPIC -o .libs/libajax_la-ajlist.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajmath.lo `test -f 'ajmath.c' || echo './'`ajmath.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajmath.c  -fPIC -DPIC -o .libs/libajax_la-ajmath.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajmatrices.lo `test -f 'ajmatrices.c' || echo './'`ajmatrices.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajmatrices.c  -fPIC -DPIC -o .libs/libajax_la-ajmatrices.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajmem.lo `test -f 'ajmem.c' || echo './'`ajmem.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajmem.c  -fPIC -DPIC -o .libs/libajax_la-ajmem.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajmess.lo `test -f 'ajmess.c' || echo './'`ajmess.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajmess.c  -fPIC -DPIC -o .libs/libajax_la-ajmess.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajnam.lo `test -f 'ajnam.c' || echo './'`ajnam.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajnam.c  -fPIC -DPIC -o .libs/libajax_la-ajnam.o
ajnam.c: In function ‘ajNamIsDbname’:
ajnam.c:4624:10: warning: implicit declaration of function ‘isalpha’ [-Wimplicit-function-declaration]
 4624 |     if (!isalpha((int)*cp++))
      |          ^~~~~~~
ajnam.c:4632:6: warning: implicit declaration of function ‘isalnum’ [-Wimplicit-function-declaration]
 4632 |  if(!isalnum((int)*cp) && (*cp != '_'))
      |      ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajnexus.lo `test -f 'ajnexus.c' || echo './'`ajnexus.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajnexus.c  -fPIC -DPIC -o .libs/libajax_la-ajnexus.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajobo.lo `test -f 'ajobo.c' || echo './'`ajobo.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajobo.c  -fPIC -DPIC -o .libs/libajax_la-ajobo.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajoboread.lo `test -f 'ajoboread.c' || echo './'`ajoboread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajoboread.c  -fPIC -DPIC -o .libs/libajax_la-ajoboread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajobowrite.lo `test -f 'ajobowrite.c' || echo './'`ajobowrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajobowrite.c  -fPIC -DPIC -o .libs/libajax_la-ajobowrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajpat.lo `test -f 'ajpat.c' || echo './'`ajpat.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajpat.c  -fPIC -DPIC -o .libs/libajax_la-ajpat.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajpdb.lo `test -f 'ajpdb.c' || echo './'`ajpdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajpdb.c  -fPIC -DPIC -o .libs/libajax_la-ajpdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajpdbio.lo `test -f 'ajpdbio.c' || echo './'`ajpdbio.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajpdbio.c  -fPIC -DPIC -o .libs/libajax_la-ajpdbio.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajphylo.lo `test -f 'ajphylo.c' || echo './'`ajphylo.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajphylo.c  -fPIC -DPIC -o .libs/libajax_la-ajphylo.o
ajphylo.c: In function ‘ajPhyloStateRead’:
ajphylo.c:1694:14: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration]
 1694 |   if(*cp && !isspace((int)*cp))
      |              ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajquery.lo `test -f 'ajquery.c' || echo './'`ajquery.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajquery.c  -fPIC -DPIC -o .libs/libajax_la-ajquery.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajrange.lo `test -f 'ajrange.c' || echo './'`ajrange.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajrange.c  -fPIC -DPIC -o .libs/libajax_la-ajrange.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajreg.lo `test -f 'ajreg.c' || echo './'`ajreg.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajreg.c  -fPIC -DPIC -o .libs/libajax_la-ajreg.o
ajreg.c: In function ‘ajRegCompC’:
ajreg.c:95:15: warning: assignment to ‘struct real_pcre *’ from incompatible pointer type ‘pcre *’ {aka ‘struct real_pcre8_or_16 *’} [-Wincompatible-pointer-types]
   95 |     ret->pcre = pcre_compile(rexp, options, &errptr, &errpos, tableptr);
      |               ^
ajreg.c: In function ‘ajRegCompCaseC’:
ajreg.c:158:15: warning: assignment to ‘struct real_pcre *’ from incompatible pointer type ‘pcre *’ {aka ‘struct real_pcre8_or_16 *’} [-Wincompatible-pointer-types]
  158 |     ret->pcre = pcre_compile(rexp, options, &errptr, &errpos, tableptr);
      |               ^
ajreg.c: In function ‘ajRegExec’:
ajreg.c:208:28: warning: passing argument 1 of ‘pcre_exec’ from incompatible pointer type [-Wincompatible-pointer-types]
  208 |     status = pcre_exec(prog->pcre, prog->extra, ajStrGetPtr(str),
      |                        ~~~~^~~~~~
      |                            |
      |                            struct real_pcre *
In file included from ajreg.h:42,
                 from ajreg.c:34:
/usr/include/pcre.h:573:30: note: expected ‘const pcre *’ {aka ‘const struct real_pcre8_or_16 *’} but argument is of type ‘struct real_pcre *’
  573 | PCRE_EXP_DECL int  pcre_exec(const pcre *, const pcre_extra *, PCRE_SPTR,
      |                              ^~~~~~~~~~~~
ajreg.c: In function ‘ajRegExecC’:
ajreg.c:259:28: warning: passing argument 1 of ‘pcre_exec’ from incompatible pointer type [-Wincompatible-pointer-types]
  259 |     status = pcre_exec(prog->pcre, prog->extra, str, strlen(str),
      |                        ~~~~^~~~~~
      |                            |
      |                            struct real_pcre *
In file included from ajreg.h:42,
                 from ajreg.c:34:
/usr/include/pcre.h:573:30: note: expected ‘const pcre *’ {aka ‘const struct real_pcre8_or_16 *’} but argument is of type ‘struct real_pcre *’
  573 | PCRE_EXP_DECL int  pcre_exec(const pcre *, const pcre_extra *, PCRE_SPTR,
      |                              ^~~~~~~~~~~~
ajreg.c: In function ‘ajRegExecall’:
ajreg.c:313:39: warning: passing argument 1 of ‘pcre_dfa_exec’ from incompatible pointer type [-Wincompatible-pointer-types]
  313 |     prog->matches = pcre_dfa_exec(prog->pcre, prog->extra,
      |                                   ~~~~^~~~~~
      |                                       |
      |                                       struct real_pcre *
In file included from ajreg.h:42,
                 from ajreg.c:34:
/usr/include/pcre.h:567:34: note: expected ‘const pcre *’ {aka ‘const struct real_pcre8_or_16 *’} but argument is of type ‘struct real_pcre *’
  567 | PCRE_EXP_DECL int  pcre_dfa_exec(const pcre *, const pcre_extra *,
      |                                  ^~~~~~~~~~~~
ajreg.c: In function ‘ajRegExecallC’:
ajreg.c:371:39: warning: passing argument 1 of ‘pcre_dfa_exec’ from incompatible pointer type [-Wincompatible-pointer-types]
  371 |     prog->matches = pcre_dfa_exec(prog->pcre, prog->extra,
      |                                   ~~~~^~~~~~
      |                                       |
      |                                       struct real_pcre *
In file included from ajreg.h:42,
                 from ajreg.c:34:
/usr/include/pcre.h:567:34: note: expected ‘const pcre *’ {aka ‘const struct real_pcre8_or_16 *’} but argument is of type ‘struct real_pcre *’
  567 | PCRE_EXP_DECL int  pcre_dfa_exec(const pcre *, const pcre_extra *,
      |                                  ^~~~~~~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajreport.lo `test -f 'ajreport.c' || echo './'`ajreport.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajreport.c  -fPIC -DPIC -o .libs/libajax_la-ajreport.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajrefseq.lo `test -f 'ajrefseq.c' || echo './'`ajrefseq.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajrefseq.c  -fPIC -DPIC -o .libs/libajax_la-ajrefseq.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajrefseqread.lo `test -f 'ajrefseqread.c' || echo './'`ajrefseqread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajrefseqread.c  -fPIC -DPIC -o .libs/libajax_la-ajrefseqread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajrefseqwrite.lo `test -f 'ajrefseqwrite.c' || echo './'`ajrefseqwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajrefseqwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajrefseqwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajresource.lo `test -f 'ajresource.c' || echo './'`ajresource.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajresource.c  -fPIC -DPIC -o .libs/libajax_la-ajresource.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajresourceread.lo `test -f 'ajresourceread.c' || echo './'`ajresourceread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajresourceread.c  -fPIC -DPIC -o .libs/libajax_la-ajresourceread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajresourcewrite.lo `test -f 'ajresourcewrite.c' || echo './'`ajresourcewrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajresourcewrite.c  -fPIC -DPIC -o .libs/libajax_la-ajresourcewrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseq.lo `test -f 'ajseq.c' || echo './'`ajseq.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseq.c  -fPIC -DPIC -o .libs/libajax_la-ajseq.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseqabi.lo `test -f 'ajseqabi.c' || echo './'`ajseqabi.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqabi.c  -fPIC -DPIC -o .libs/libajax_la-ajseqabi.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseqbam.lo `test -f 'ajseqbam.c' || echo './'`ajseqbam.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqbam.c  -fPIC -DPIC -o .libs/libajax_la-ajseqbam.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseqread.lo `test -f 'ajseqread.c' || echo './'`ajseqread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqread.c  -fPIC -DPIC -o .libs/libajax_la-ajseqread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseqtype.lo `test -f 'ajseqtype.c' || echo './'`ajseqtype.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqtype.c  -fPIC -DPIC -o .libs/libajax_la-ajseqtype.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajseqwrite.lo `test -f 'ajseqwrite.c' || echo './'`ajseqwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajseqwrite.o
ajseqwrite.c: In function ‘ajSeqoutGetCheckgcg’:
ajseqwrite.c:10031:19: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration]
10031 |  check += count * toupper((ajint) cp[i]);
      |                   ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajsort.lo `test -f 'ajsort.c' || echo './'`ajsort.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajsort.c  -fPIC -DPIC -o .libs/libajax_la-ajsort.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajsql.lo `test -f 'ajsql.c' || echo './'`ajsql.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajsql.c  -fPIC -DPIC -o .libs/libajax_la-ajsql.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajstr.lo `test -f 'ajstr.c' || echo './'`ajstr.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajstr.c  -fPIC -DPIC -o .libs/libajax_la-ajstr.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajsys.lo `test -f 'ajsys.c' || echo './'`ajsys.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajsys.c  -fPIC -DPIC -o .libs/libajax_la-ajsys.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtable.lo `test -f 'ajtable.c' || echo './'`ajtable.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtable.c  -fPIC -DPIC -o .libs/libajax_la-ajtable.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtagval.lo `test -f 'ajtagval.c' || echo './'`ajtagval.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtagval.c  -fPIC -DPIC -o .libs/libajax_la-ajtagval.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtax.lo `test -f 'ajtax.c' || echo './'`ajtax.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtax.c  -fPIC -DPIC -o .libs/libajax_la-ajtax.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtaxread.lo `test -f 'ajtaxread.c' || echo './'`ajtaxread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtaxread.c  -fPIC -DPIC -o .libs/libajax_la-ajtaxread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtaxwrite.lo `test -f 'ajtaxwrite.c' || echo './'`ajtaxwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtaxwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajtaxwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtext.lo `test -f 'ajtext.c' || echo './'`ajtext.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtext.c  -fPIC -DPIC -o .libs/libajax_la-ajtext.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtextread.lo `test -f 'ajtextread.c' || echo './'`ajtextread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtextread.c  -fPIC -DPIC -o .libs/libajax_la-ajtextread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtextwrite.lo `test -f 'ajtextwrite.c' || echo './'`ajtextwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtextwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajtextwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtime.lo `test -f 'ajtime.c' || echo './'`ajtime.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtime.c  -fPIC -DPIC -o .libs/libajax_la-ajtime.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtranslate.lo `test -f 'ajtranslate.c' || echo './'`ajtranslate.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtranslate.c  -fPIC -DPIC -o .libs/libajax_la-ajtranslate.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajtree.lo `test -f 'ajtree.c' || echo './'`ajtree.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtree.c  -fPIC -DPIC -o .libs/libajax_la-ajtree.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajurl.lo `test -f 'ajurl.c' || echo './'`ajurl.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajurl.c  -fPIC -DPIC -o .libs/libajax_la-ajurl.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajurlread.lo `test -f 'ajurlread.c' || echo './'`ajurlread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajurlread.c  -fPIC -DPIC -o .libs/libajax_la-ajurlread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajurlwrite.lo `test -f 'ajurlwrite.c' || echo './'`ajurlwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajurlwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajurlwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajutil.lo `test -f 'ajutil.c' || echo './'`ajutil.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajutil.c  -fPIC -DPIC -o .libs/libajax_la-ajutil.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajvar.lo `test -f 'ajvar.c' || echo './'`ajvar.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvar.c  -fPIC -DPIC -o .libs/libajax_la-ajvar.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajvarbcf.lo `test -f 'ajvarbcf.c' || echo './'`ajvarbcf.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvarbcf.c  -fPIC -DPIC -o .libs/libajax_la-ajvarbcf.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajvarread.lo `test -f 'ajvarread.c' || echo './'`ajvarread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvarread.c  -fPIC -DPIC -o .libs/libajax_la-ajvarread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajvarwrite.lo `test -f 'ajvarwrite.c' || echo './'`ajvarwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvarwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajvarwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajvector.lo `test -f 'ajvector.c' || echo './'`ajvector.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvector.c  -fPIC -DPIC -o .libs/libajax_la-ajvector.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajxml.lo `test -f 'ajxml.c' || echo './'`ajxml.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajxml.c  -fPIC -DPIC -o .libs/libajax_la-ajxml.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajxmlread.lo `test -f 'ajxmlread.c' || echo './'`ajxmlread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajxmlread.c  -fPIC -DPIC -o .libs/libajax_la-ajxmlread.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I.   -DNO_AUTH   -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM="\"Linux\"" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajax_la-ajxmlwrite.lo `test -f 'ajxmlwrite.c' || echo './'`ajxmlwrite.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -DNO_AUTH -DAJAX_FIXED_ROOT=\"/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss\" -DAJAX_SYSTEM=\"Linux\" -DPREFIX=\"/usr\" -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajxmlwrite.c  -fPIC -DPIC -o .libs/libajax_la-ajxmlwrite.o
/bin/sh ../../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0     -Wl,-O1 -Wl,--as-needed -o libajax.la -rpath /usr/lib libajax_la-ajalign.lo libajax_la-ajarr.lo libajax_la-ajassem.lo libajax_la-ajassemread.lo libajax_la-ajassemwrite.lo libajax_la-ajassert.lo libajax_la-ajbamindex.lo libajax_la-ajbase.lo libajax_la-ajcall.lo libajax_la-ajcigar.lo libajax_la-ajcod.lo libajax_la-ajdan.lo libajax_la-ajdmx.lo libajax_la-ajdom.lo libajax_la-ajdomain.lo libajax_la-ajexcept.lo libajax_la-ajfeat.lo libajax_la-ajfeatread.lo libajax_la-ajfeatwrite.lo libajax_la-ajfile.lo libajax_la-ajfiledata.lo libajax_la-ajfileio.lo libajax_la-ajfmt.lo libajax_la-ajftp.lo libajax_la-ajhttp.lo libajax_la-ajindex.lo libajax_la-ajjava.lo libajax_la-ajlist.lo libajax_la-ajmath.lo libajax_la-ajmatrices.lo libajax_la-ajmem.lo libajax_la-ajmess.lo libajax_la-ajnam.lo libajax_la-ajnexus.lo libajax_la-ajobo.lo libajax_la-ajoboread.lo libajax_la-ajobowrite.lo libajax_la-ajpat.lo libajax_la-ajpdb.lo libajax_la-ajpdbio.lo libajax_la-ajphylo.lo libajax_la-ajquery.lo libajax_la-ajrange.lo libajax_la-ajreg.lo libajax_la-ajreport.lo libajax_la-ajrefseq.lo libajax_la-ajrefseqread.lo libajax_la-ajrefseqwrite.lo libajax_la-ajresource.lo libajax_la-ajresourceread.lo libajax_la-ajresourcewrite.lo libajax_la-ajseq.lo libajax_la-ajseqabi.lo libajax_la-ajseqbam.lo libajax_la-ajseqread.lo libajax_la-ajseqtype.lo libajax_la-ajseqwrite.lo libajax_la-ajsort.lo libajax_la-ajsql.lo libajax_la-ajstr.lo libajax_la-ajsys.lo libajax_la-ajtable.lo libajax_la-ajtagval.lo libajax_la-ajtax.lo libajax_la-ajtaxread.lo libajax_la-ajtaxwrite.lo libajax_la-ajtext.lo libajax_la-ajtextread.lo libajax_la-ajtextwrite.lo libajax_la-ajtime.lo libajax_la-ajtranslate.lo libajax_la-ajtree.lo libajax_la-ajurl.lo libajax_la-ajurlread.lo libajax_la-ajurlwrite.lo libajax_la-ajutil.lo libajax_la-ajvar.lo libajax_la-ajvarbcf.lo libajax_la-ajvarread.lo libajax_la-ajvarwrite.lo libajax_la-ajvector.lo libajax_la-ajxml.lo libajax_la-ajxmlread.lo libajax_la-ajxmlwrite.lo -lexpat  -lpcre  -lz  -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libajax_la-ajalign.o .libs/libajax_la-ajarr.o .libs/libajax_la-ajassem.o .libs/libajax_la-ajassemread.o .libs/libajax_la-ajassemwrite.o .libs/libajax_la-ajassert.o .libs/libajax_la-ajbamindex.o .libs/libajax_la-ajbase.o .libs/libajax_la-ajcall.o .libs/libajax_la-ajcigar.o .libs/libajax_la-ajcod.o .libs/libajax_la-ajdan.o .libs/libajax_la-ajdmx.o .libs/libajax_la-ajdom.o .libs/libajax_la-ajdomain.o .libs/libajax_la-ajexcept.o .libs/libajax_la-ajfeat.o .libs/libajax_la-ajfeatread.o .libs/libajax_la-ajfeatwrite.o .libs/libajax_la-ajfile.o .libs/libajax_la-ajfiledata.o .libs/libajax_la-ajfileio.o .libs/libajax_la-ajfmt.o .libs/libajax_la-ajftp.o .libs/libajax_la-ajhttp.o .libs/libajax_la-ajindex.o .libs/libajax_la-ajjava.o .libs/libajax_la-ajlist.o .libs/libajax_la-ajmath.o .libs/libajax_la-ajmatrices.o .libs/libajax_la-ajmem.o .libs/libajax_la-ajmess.o .libs/libajax_la-ajnam.o .libs/libajax_la-ajnexus.o .libs/libajax_la-ajobo.o .libs/libajax_la-ajoboread.o .libs/libajax_la-ajobowrite.o .libs/libajax_la-ajpat.o .libs/libajax_la-ajpdb.o .libs/libajax_la-ajpdbio.o .libs/libajax_la-ajphylo.o .libs/libajax_la-ajquery.o .libs/libajax_la-ajrange.o .libs/libajax_la-ajreg.o .libs/libajax_la-ajreport.o .libs/libajax_la-ajrefseq.o .libs/libajax_la-ajrefseqread.o .libs/libajax_la-ajrefseqwrite.o .libs/libajax_la-ajresource.o .libs/libajax_la-ajresourceread.o .libs/libajax_la-ajresourcewrite.o .libs/libajax_la-ajseq.o .libs/libajax_la-ajseqabi.o .libs/libajax_la-ajseqbam.o .libs/libajax_la-ajseqread.o .libs/libajax_la-ajseqtype.o .libs/libajax_la-ajseqwrite.o .libs/libajax_la-ajsort.o .libs/libajax_la-ajsql.o .libs/libajax_la-ajstr.o .libs/libajax_la-ajsys.o .libs/libajax_la-ajtable.o .libs/libajax_la-ajtagval.o .libs/libajax_la-ajtax.o .libs/libajax_la-ajtaxread.o .libs/libajax_la-ajtaxwrite.o .libs/libajax_la-ajtext.o .libs/libajax_la-ajtextread.o .libs/libajax_la-ajtextwrite.o .libs/libajax_la-ajtime.o .libs/libajax_la-ajtranslate.o .libs/libajax_la-ajtree.o .libs/libajax_la-ajurl.o .libs/libajax_la-ajurlread.o .libs/libajax_la-ajurlwrite.o .libs/libajax_la-ajutil.o .libs/libajax_la-ajvar.o .libs/libajax_la-ajvarbcf.o .libs/libajax_la-ajvarread.o .libs/libajax_la-ajvarwrite.o .libs/libajax_la-ajvector.o .libs/libajax_la-ajxml.o .libs/libajax_la-ajxmlread.o .libs/libajax_la-ajxmlwrite.o   -Wl,--as-needed -lexpat -lpcre -lz -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libajax.so.6 -o .libs/libajax.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libajax.so.6" && ln -s "libajax.so.6.0.5" "libajax.so.6")
libtool: link: (cd ".libs" && rm -f "libajax.so" && ln -s "libajax.so.6.0.5" "libajax.so")
libtool: link: ( cd ".libs" && rm -f "libajax.la" && ln -s "../libajax.la" "libajax.la" )
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core'
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core'
Making all in graphics
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics'
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxg_la-ajgraph.lo `test -f 'ajgraph.c' || echo './'`ajgraph.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajgraph.c  -fPIC -DPIC -o .libs/libajaxg_la-ajgraph.o
ajgraph.c: In function ‘ajGraphicsGetCharsize’:
ajgraph.c:1843:9: warning: passing argument 1 of ‘c_plgchr’ from incompatible pointer type [-Wincompatible-pointer-types]
 1843 |  plgchr(defheight,currentscale);
      |         ^~~~~~~~~
      |         |
      |         float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1082:27: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1082 | c_plgchr( PLFLT_NC_SCALAR p_def, PLFLT_NC_SCALAR p_ht );
      |           ~~~~~~~~~~~~~~~~^~~~~
ajgraph.c:1843:19: warning: passing argument 2 of ‘c_plgchr’ from incompatible pointer type [-Wincompatible-pointer-types]
 1843 |  plgchr(defheight,currentscale);
      |                   ^~~~~~~~~~~~
      |                   |
      |                   float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1082:50: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1082 | c_plgchr( PLFLT_NC_SCALAR p_def, PLFLT_NC_SCALAR p_ht );
      |                                  ~~~~~~~~~~~~~~~~^~~~
ajgraph.c: In function ‘ajGraphicsGetParamsPage’:
ajgraph.c:1908:10: warning: passing argument 1 of ‘c_plgpage’ from incompatible pointer type [-Wincompatible-pointer-types]
 1908 |  plgpage(xp,yp,xleng,yleng,xoff,yoff);
      |          ^~
      |          |
      |          float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1167:28: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1167 | c_plgpage( PLFLT_NC_SCALAR p_xp, PLFLT_NC_SCALAR p_yp,
      |            ~~~~~~~~~~~~~~~~^~~~
ajgraph.c:1908:13: warning: passing argument 2 of ‘c_plgpage’ from incompatible pointer type [-Wincompatible-pointer-types]
 1908 |  plgpage(xp,yp,xleng,yleng,xoff,yoff);
      |             ^~
      |             |
      |             float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1167:50: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1167 | c_plgpage( PLFLT_NC_SCALAR p_xp, PLFLT_NC_SCALAR p_yp,
      |                                  ~~~~~~~~~~~~~~~~^~~~
ajgraph.c: In function ‘ajGraphicsDrawposBox’:
ajgraph.c:2333:16: warning: passing argument 2 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2333 |  GraphArray(5, xa, ya);
      |                ^~
      |                |
      |                PLFLT * {aka double *}
ajgraph.c:56:14: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |       ~~~~~~~^
ajgraph.c:2333:20: warning: passing argument 3 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2333 |  GraphArray(5, xa, ya);
      |                    ^~
      |                    |
      |                    PLFLT * {aka double *}
ajgraph.c:56:24: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |                 ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposBoxFill’:
ajgraph.c:2378:15: warning: passing argument 2 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2378 |  GraphFill(4, xa, ya);
      |               ^~
      |               |
      |               PLFLT * {aka double *}
ajgraph.c:72:54: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                               ~~~~~~~^
ajgraph.c:2378:19: warning: passing argument 3 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2378 |  GraphFill(4, xa, ya);
      |                   ^~
      |                   |
      |                   PLFLT * {aka double *}
ajgraph.c:72:64: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                                         ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposCircle’:
ajgraph.c:2422:21: warning: passing argument 2 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2422 |     GraphArray(361, xa,ya);
      |                     ^~
      |                     |
      |                     PLFLT * {aka double *}
ajgraph.c:56:14: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |       ~~~~~~~^
ajgraph.c:2422:24: warning: passing argument 3 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2422 |     GraphArray(361, xa,ya);
      |                        ^~
      |                        |
      |                        PLFLT * {aka double *}
ajgraph.c:56:24: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |                 ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposDia’:
ajgraph.c:2463:19: warning: passing argument 2 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2463 |     GraphArray(5, xa, ya);
      |                   ^~
      |                   |
      |                   PLFLT * {aka double *}
ajgraph.c:56:14: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |       ~~~~~~~^
ajgraph.c:2463:23: warning: passing argument 3 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2463 |     GraphArray(5, xa, ya);
      |                       ^~
      |                       |
      |                       PLFLT * {aka double *}
ajgraph.c:56:24: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |                 ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposDiaFill’:
ajgraph.c:2502:18: warning: passing argument 2 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2502 |     GraphFill(4, xa, ya);
      |                  ^~
      |                  |
      |                  PLFLT * {aka double *}
ajgraph.c:72:54: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                               ~~~~~~~^
ajgraph.c:2502:22: warning: passing argument 3 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2502 |     GraphFill(4, xa, ya);
      |                      ^~
      |                      |
      |                      PLFLT * {aka double *}
ajgraph.c:72:64: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                                         ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposRect’:
ajgraph.c:2588:16: warning: passing argument 2 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2588 |  GraphArray(5, xa, ya);
      |                ^~
      |                |
      |                PLFLT * {aka double *}
ajgraph.c:56:14: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |       ~~~~~~~^
ajgraph.c:2588:20: warning: passing argument 3 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 2588 |  GraphArray(5, xa, ya);
      |                    ^~
      |                    |
      |                    PLFLT * {aka double *}
ajgraph.c:56:24: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |                 ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawposRectFill’:
ajgraph.c:2634:15: warning: passing argument 2 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2634 |  GraphFill(4, xa, ya);
      |               ^~
      |               |
      |               PLFLT * {aka double *}
ajgraph.c:72:54: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                               ~~~~~~~^
ajgraph.c:2634:19: warning: passing argument 3 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 2634 |  GraphFill(4, xa, ya);
      |                   ^~
      |                   |
      |                   PLFLT * {aka double *}
ajgraph.c:72:64: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                                         ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawsetDots’:
ajgraph.c:2900:18: warning: passing argument 1 of ‘GraphSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 2900 |     GraphSymbols(xx, yy, num, 17);
      |                  ^~
      |                  |
      |                  PLFLT * {aka double *}
ajgraph.c:94:37: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   94 | static void     GraphSymbols(float *xx1, float *yy1, ajuint numofdots,
      |                              ~~~~~~~^~~
ajgraph.c:2900:22: warning: passing argument 2 of ‘GraphSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 2900 |     GraphSymbols(xx, yy, num, 17);
      |                      ^~
      |                      |
      |                      PLFLT * {aka double *}
ajgraph.c:94:49: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   94 | static void     GraphSymbols(float *xx1, float *yy1, ajuint numofdots,
      |                                          ~~~~~~~^~~
ajgraph.c: In function ‘ajGraphicsDrawsetPoly’:
ajgraph.c:3002:21: warning: passing argument 2 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 3002 |     GraphArray(num, xx, yy);
      |                     ^~
      |                     |
      |                     PLFLT * {aka double *}
ajgraph.c:56:14: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |       ~~~~~~~^
ajgraph.c:3002:25: warning: passing argument 3 of ‘GraphArray’ from incompatible pointer type [-Wincompatible-pointer-types]
 3002 |     GraphArray(num, xx, yy);
      |                         ^~
      |                         |
      |                         PLFLT * {aka double *}
ajgraph.c:56:24: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   56 |       float *x, float *y);
      |                 ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawsetPolyFill’:
ajgraph.c:3025:20: warning: passing argument 2 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 3025 |     GraphFill(num, xx, yy);
      |                    ^~
      |                    |
      |                    PLFLT * {aka double *}
ajgraph.c:72:54: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                               ~~~~~~~^
ajgraph.c:3025:24: warning: passing argument 3 of ‘GraphFill’ from incompatible pointer type [-Wincompatible-pointer-types]
 3025 |     GraphFill(num, xx, yy);
      |                        ^~
      |                        |
      |                        PLFLT * {aka double *}
ajgraph.c:72:64: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   72 | static void     GraphFill(ajuint numofpoints, float *x, float *y);
      |                                                         ~~~~~~~^
ajgraph.c: In function ‘ajGraphicsDrawsetSymbols’:
ajgraph.c:3051:18: warning: passing argument 1 of ‘GraphSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 3051 |     GraphSymbols(xx, yy, num, symbol);
      |                  ^~
      |                  |
      |                  PLFLT * {aka double *}
ajgraph.c:94:37: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   94 | static void     GraphSymbols(float *xx1, float *yy1, ajuint numofdots,
      |                              ~~~~~~~^~~
ajgraph.c:3051:22: warning: passing argument 2 of ‘GraphSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 3051 |     GraphSymbols(xx, yy, num, symbol);
      |                      ^~
      |                      |
      |                      PLFLT * {aka double *}
ajgraph.c:94:49: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
   94 | static void     GraphSymbols(float *xx1, float *yy1, ajuint numofdots,
      |                                          ~~~~~~~^~~
ajgraph.c: In function ‘ajGraphicsCalcCharsize’:
ajgraph.c:3155:27: warning: passing argument 1 of ‘ajGraphicsGetCharsize’ from incompatible pointer type [-Wincompatible-pointer-types]
 3155 |     ajGraphicsGetCharsize(&origcharsize,&origcharht);
      |                           ^~~~~~~~~~~~~
      |                           |
      |                           PLFLT * {aka double *}
ajgraph.c:1829:35: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
 1829 | void ajGraphicsGetCharsize(float *defheight, float *currentscale)
      |                            ~~~~~~~^~~~~~~~~
ajgraph.c:3155:41: warning: passing argument 2 of ‘ajGraphicsGetCharsize’ from incompatible pointer type [-Wincompatible-pointer-types]
 3155 |     ajGraphicsGetCharsize(&origcharsize,&origcharht);
      |                                         ^~~~~~~~~~~
      |                                         |
      |                                         PLFLT * {aka double *}
ajgraph.c:1829:53: note: expected ‘float *’ but argument is of type ‘PLFLT *’ {aka ‘double *’}
 1829 | void ajGraphicsGetCharsize(float *defheight, float *currentscale)
      |                                              ~~~~~~~^~~~~~~~~~~~
ajgraph.c: In function ‘ajGraphicsCalcCoord’:
ajgraph.c:3198:8: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
 3198 |     xy = (float *)AJALLOC( 2*sizeof(float) );
      |        ^
ajgraph.c: In function ‘ajGraphicsUnused’:
ajgraph.c:3363:25: warning: passing argument 2 of ‘GraphCheckPoints’ from incompatible pointer type [-Wincompatible-pointer-types]
 3363 |     GraphCheckPoints(0, &f, &f);
      |                         ^~
      |                         |
      |                         float *
ajgraph.c:62:56: note: expected ‘const PLFLT *’ {aka ‘const double *’} but argument is of type ‘float *’
   62 | static void     GraphCheckPoints(ajint n, const PLFLT *x, const PLFLT *y);
      |                                           ~~~~~~~~~~~~~^
ajgraph.c:3363:29: warning: passing argument 3 of ‘GraphCheckPoints’ from incompatible pointer type [-Wincompatible-pointer-types]
 3363 |     GraphCheckPoints(0, &f, &f);
      |                             ^~
      |                             |
      |                             float *
ajgraph.c:62:72: note: expected ‘const PLFLT *’ {aka ‘const double *’} but argument is of type ‘float *’
   62 | static void     GraphCheckPoints(ajint n, const PLFLT *x, const PLFLT *y);
      |                                                           ~~~~~~~~~~~~~^
ajgraph.c: In function ‘ajGraphGetParamsPage’:
ajgraph.c:4618:10: warning: passing argument 1 of ‘c_plgpage’ from incompatible pointer type [-Wincompatible-pointer-types]
 4618 |  plgpage(xp,yp,xleng,yleng,xoff,yoff);
      |          ^~
      |          |
      |          float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1167:28: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1167 | c_plgpage( PLFLT_NC_SCALAR p_xp, PLFLT_NC_SCALAR p_yp,
      |            ~~~~~~~~~~~~~~~~^~~~
ajgraph.c:4618:13: warning: passing argument 2 of ‘c_plgpage’ from incompatible pointer type [-Wincompatible-pointer-types]
 4618 |  plgpage(xp,yp,xleng,yleng,xoff,yoff);
      |             ^~
      |             |
      |             float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1167:50: note: expected ‘PLFLT_NC_SCALAR’ {aka ‘double *’} but argument is of type ‘float *’
 1167 | c_plgpage( PLFLT_NC_SCALAR p_xp, PLFLT_NC_SCALAR p_yp,
      |                                  ~~~~~~~~~~~~~~~~^~~~
ajgraph.c: In function ‘GraphArray’:
ajgraph.c:7429:22: warning: passing argument 2 of ‘c_plline’ from incompatible pointer type [-Wincompatible-pointer-types]
 7429 |  plline(numofpoints, x,y);
      |                      ^
      |                      |
      |                      float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1360:33: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1360 | c_plline( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y );
      |                    ~~~~~~~~~~~~~^
ajgraph.c:7429:24: warning: passing argument 3 of ‘c_plline’ from incompatible pointer type [-Wincompatible-pointer-types]
 7429 |  plline(numofpoints, x,y);
      |                        ^
      |                        |
      |                        float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1360:49: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1360 | c_plline( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y );
      |                                    ~~~~~~~~~~~~~^
ajgraph.c: In function ‘GraphFill’:
ajgraph.c:7562:25: warning: passing argument 2 of ‘c_plfill’ from incompatible pointer type [-Wincompatible-pointer-types]
 7562 |     plfill(numofpoints, x, y);
      |                         ^
      |                         |
      |                         float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1057:33: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1057 | c_plfill( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y );
      |                    ~~~~~~~~~~~~~^
ajgraph.c:7562:28: warning: passing argument 3 of ‘c_plfill’ from incompatible pointer type [-Wincompatible-pointer-types]
 7562 |     plfill(numofpoints, x, y);
      |                            ^
      |                            |
      |                            float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1057:49: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1057 | c_plfill( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y );
      |                                    ~~~~~~~~~~~~~^
ajgraph.c: In function ‘GraphxyGeneral’:
ajgraph.c:9643:52: warning: passing argument 2 of ‘ajGraphicsDrawsetSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 9643 |                                          (graphdata->x), (graphdata->y), 9);
      |                                          ~~~~~~~~~~^~~~
      |                                                    |
      |                                                    float *
ajgraph.c:3048:50: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
 3048 | void ajGraphicsDrawsetSymbols(ajuint num, PLFLT *xx, PLFLT *yy,
      |                                           ~~~~~~~^~
ajgraph.c:9643:68: warning: passing argument 3 of ‘ajGraphicsDrawsetSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 9643 |                                          (graphdata->x), (graphdata->y), 9);
      |                                                          ~~~~~~~~~~^~~~
      |                                                                    |
      |                                                                    float *
ajgraph.c:3048:61: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
 3048 | void ajGraphicsDrawsetSymbols(ajuint num, PLFLT *xx, PLFLT *yy,
      |                                                      ~~~~~~~^~
ajgraph.c:9712:52: warning: passing argument 2 of ‘ajGraphicsDrawsetSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 9712 |                                          (graphdata->x), (graphdata->y), 9);
      |                                          ~~~~~~~~~~^~~~
      |                                                    |
      |                                                    float *
ajgraph.c:3048:50: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
 3048 | void ajGraphicsDrawsetSymbols(ajuint num, PLFLT *xx, PLFLT *yy,
      |                                           ~~~~~~~^~
ajgraph.c:9712:68: warning: passing argument 3 of ‘ajGraphicsDrawsetSymbols’ from incompatible pointer type [-Wincompatible-pointer-types]
 9712 |                                          (graphdata->x), (graphdata->y), 9);
      |                                                          ~~~~~~~~~~^~~~
      |                                                                    |
      |                                                                    float *
ajgraph.c:3048:61: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
 3048 | void ajGraphicsDrawsetSymbols(ajuint num, PLFLT *xx, PLFLT *yy,
      |                                                      ~~~~~~~^~
ajgraph.c: In function ‘GraphSymbols’:
ajgraph.c:9975:22: warning: passing argument 2 of ‘c_plpoin’ from incompatible pointer type [-Wincompatible-pointer-types]
 9975 |     plpoin(numofdots,xx1,yy1, symbol);
      |                      ^~~
      |                      |
      |                      float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1538:33: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1538 | c_plpoin( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y, PLINT code );
      |                    ~~~~~~~~~~~~~^
ajgraph.c:9975:26: warning: passing argument 3 of ‘c_plpoin’ from incompatible pointer type [-Wincompatible-pointer-types]
 9975 |     plpoin(numofdots,xx1,yy1, symbol);
      |                          ^~~
      |                          |
      |                          float *
In file included from ajgraph.h:35,
                 from ajgraph.c:35:
/usr/include/plplot/plplot.h:1538:49: note: expected ‘PLFLT_VECTOR’ {aka ‘const double *’} but argument is of type ‘float *’
 1538 | c_plpoin( PLINT n, PLFLT_VECTOR x, PLFLT_VECTOR y, PLINT code );
      |                                    ~~~~~~~~~~~~~^
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxg_la-ajhist.lo `test -f 'ajhist.c' || echo './'`ajhist.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajhist.c  -fPIC -DPIC -o .libs/libajaxg_la-ajhist.o
ajhist.c: In function ‘ajHistDisplay’:
ajhist.c:410:8: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  410 |   data = thys->hists[j]->data;
      |        ^
ajhist.c:437:8: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  437 |   data = thys->hists[j]->data;
      |        ^
ajhist.c:457:8: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  457 |   data = thys->hists[j]->data;
      |        ^
ajhist.c:474:7: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  474 |  data = thys->hists[0]->data;
      |       ^
ajhist.c:539:11: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  539 |      data = thys->hists[i]->data;
      |           ^
ajhist.c:592:11: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  592 |      data = thys->hists[i]->data;
      |           ^
ajhist.c:636:11: warning: assignment to ‘PLFLT *’ {aka ‘double *’} from incompatible pointer type ‘float *’ [-Wincompatible-pointer-types]
  636 |      data = thys->hists[i]->data;
      |           ^
ajhist.c: In function ‘ajHistDataAdd’:
ajhist.c:1122:33: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1122 |     thys->hists[indexnum]->data = data;
      |                                 ^
/bin/sh ../../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0  -Wl,-O1 -Wl,--as-needed -o libajaxg.la -rpath /usr/lib libajaxg_la-ajgraph.lo libajaxg_la-ajhist.lo ../core/libajax.la -lplplot  -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libajaxg_la-ajgraph.o .libs/libajaxg_la-ajhist.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,--as-needed ../core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libajaxg.so.6 -o .libs/libajaxg.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libajaxg.so.6" && ln -s "libajaxg.so.6.0.5" "libajaxg.so.6")
libtool: link: (cd ".libs" && rm -f "libajaxg.so" && ln -s "libajaxg.so.6.0.5" "libajaxg.so")
libtool: link: ( cd ".libs" && rm -f "libajaxg.la" && ln -s "../libajaxg.la" "libajaxg.la" )
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics'
Making all in ensembl
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl'
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensalign.lo `test -f 'ensalign.c' || echo './'`ensalign.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensalign.c  -fPIC -DPIC -o .libs/libensembl_la-ensalign.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensanalysis.lo `test -f 'ensanalysis.c' || echo './'`ensanalysis.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensanalysis.c  -fPIC -DPIC -o .libs/libensembl_la-ensanalysis.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensassembly.lo `test -f 'ensassembly.c' || echo './'`ensassembly.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensassembly.c  -fPIC -DPIC -o .libs/libensembl_la-ensassembly.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensassemblyexception.lo `test -f 'ensassemblyexception.c' || echo './'`ensassemblyexception.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensassemblyexception.c  -fPIC -DPIC -o .libs/libensembl_la-ensassemblyexception.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensassemblymapper.lo `test -f 'ensassemblymapper.c' || echo './'`ensassemblymapper.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensassemblymapper.c  -fPIC -DPIC -o .libs/libensembl_la-ensassemblymapper.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensattribute.lo `test -f 'ensattribute.c' || echo './'`ensattribute.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensattribute.c  -fPIC -DPIC -o .libs/libensembl_la-ensattribute.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensbaseadaptor.lo `test -f 'ensbaseadaptor.c' || echo './'`ensbaseadaptor.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensbaseadaptor.c  -fPIC -DPIC -o .libs/libensembl_la-ensbaseadaptor.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enscache.lo `test -f 'enscache.c' || echo './'`enscache.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enscache.c  -fPIC -DPIC -o .libs/libensembl_la-enscache.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enscoordsystem.lo `test -f 'enscoordsystem.c' || echo './'`enscoordsystem.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enscoordsystem.c  -fPIC -DPIC -o .libs/libensembl_la-enscoordsystem.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensdatabaseadaptor.lo `test -f 'ensdatabaseadaptor.c' || echo './'`ensdatabaseadaptor.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensdatabaseadaptor.c  -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseadaptor.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensdatabaseconnection.lo `test -f 'ensdatabaseconnection.c' || echo './'`ensdatabaseconnection.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensdatabaseconnection.c  -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseconnection.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensdatabaseentry.lo `test -f 'ensdatabaseentry.c' || echo './'`ensdatabaseentry.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensdatabaseentry.c  -fPIC -DPIC -o .libs/libensembl_la-ensdatabaseentry.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensdensity.lo `test -f 'ensdensity.c' || echo './'`ensdensity.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensdensity.c  -fPIC -DPIC -o .libs/libensembl_la-ensdensity.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensditag.lo `test -f 'ensditag.c' || echo './'`ensditag.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensditag.c  -fPIC -DPIC -o .libs/libensembl_la-ensditag.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensexon.lo `test -f 'ensexon.c' || echo './'`ensexon.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensexon.c  -fPIC -DPIC -o .libs/libensembl_la-ensexon.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensexternaldatabase.lo `test -f 'ensexternaldatabase.c' || echo './'`ensexternaldatabase.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensexternaldatabase.c  -fPIC -DPIC -o .libs/libensembl_la-ensexternaldatabase.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensfeature.lo `test -f 'ensfeature.c' || echo './'`ensfeature.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensfeature.c  -fPIC -DPIC -o .libs/libensembl_la-ensfeature.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgene.lo `test -f 'ensgene.c' || echo './'`ensgene.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgene.c  -fPIC -DPIC -o .libs/libensembl_la-ensgene.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvallele.lo `test -f 'ensgvallele.c' || echo './'`ensgvallele.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvallele.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvallele.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvattribute.lo `test -f 'ensgvattribute.c' || echo './'`ensgvattribute.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvattribute.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvattribute.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvbaseadaptor.lo `test -f 'ensgvbaseadaptor.c' || echo './'`ensgvbaseadaptor.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvbaseadaptor.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvbaseadaptor.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvdatabaseadaptor.lo `test -f 'ensgvdatabaseadaptor.c' || echo './'`ensgvdatabaseadaptor.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvdatabaseadaptor.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvdatabaseadaptor.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvgenotype.lo `test -f 'ensgvgenotype.c' || echo './'`ensgvgenotype.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvgenotype.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvgenotype.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvindividual.lo `test -f 'ensgvindividual.c' || echo './'`ensgvindividual.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvindividual.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvindividual.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvpopulation.lo `test -f 'ensgvpopulation.c' || echo './'`ensgvpopulation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvpopulation.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvpopulation.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvsample.lo `test -f 'ensgvsample.c' || echo './'`ensgvsample.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvsample.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvsample.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvsource.lo `test -f 'ensgvsource.c' || echo './'`ensgvsource.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvsource.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvsource.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvsynonym.lo `test -f 'ensgvsynonym.c' || echo './'`ensgvsynonym.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvsynonym.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvsynonym.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensgvvariation.lo `test -f 'ensgvvariation.c' || echo './'`ensgvvariation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensgvvariation.c  -fPIC -DPIC -o .libs/libensembl_la-ensgvvariation.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensintron.lo `test -f 'ensintron.c' || echo './'`ensintron.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensintron.c  -fPIC -DPIC -o .libs/libensembl_la-ensintron.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enskaryotype.lo `test -f 'enskaryotype.c' || echo './'`enskaryotype.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enskaryotype.c  -fPIC -DPIC -o .libs/libensembl_la-enskaryotype.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensmapper.lo `test -f 'ensmapper.c' || echo './'`ensmapper.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensmapper.c  -fPIC -DPIC -o .libs/libensembl_la-ensmapper.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensmarker.lo `test -f 'ensmarker.c' || echo './'`ensmarker.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensmarker.c  -fPIC -DPIC -o .libs/libensembl_la-ensmarker.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensmetacoordinate.lo `test -f 'ensmetacoordinate.c' || echo './'`ensmetacoordinate.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensmetacoordinate.c  -fPIC -DPIC -o .libs/libensembl_la-ensmetacoordinate.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensmetainformation.lo `test -f 'ensmetainformation.c' || echo './'`ensmetainformation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensmetainformation.c  -fPIC -DPIC -o .libs/libensembl_la-ensmetainformation.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensmiscellaneous.lo `test -f 'ensmiscellaneous.c' || echo './'`ensmiscellaneous.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensmiscellaneous.c  -fPIC -DPIC -o .libs/libensembl_la-ensmiscellaneous.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensontology.lo `test -f 'ensontology.c' || echo './'`ensontology.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensontology.c  -fPIC -DPIC -o .libs/libensembl_la-ensontology.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensoperon.lo `test -f 'ensoperon.c' || echo './'`ensoperon.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensoperon.c  -fPIC -DPIC -o .libs/libensembl_la-ensoperon.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensprediction.lo `test -f 'ensprediction.c' || echo './'`ensprediction.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensprediction.c  -fPIC -DPIC -o .libs/libensembl_la-ensprediction.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensprojectionsegment.lo `test -f 'ensprojectionsegment.c' || echo './'`ensprojectionsegment.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensprojectionsegment.c  -fPIC -DPIC -o .libs/libensembl_la-ensprojectionsegment.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensprotein.lo `test -f 'ensprotein.c' || echo './'`ensprotein.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensprotein.c  -fPIC -DPIC -o .libs/libensembl_la-ensprotein.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqc.lo `test -f 'ensqc.c' || echo './'`ensqc.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqc.c  -fPIC -DPIC -o .libs/libensembl_la-ensqc.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcalignment.lo `test -f 'ensqcalignment.c' || echo './'`ensqcalignment.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcalignment.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcalignment.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcdasfeature.lo `test -f 'ensqcdasfeature.c' || echo './'`ensqcdasfeature.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcdasfeature.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcdasfeature.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcdatabase.lo `test -f 'ensqcdatabase.c' || echo './'`ensqcdatabase.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcdatabase.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcdatabase.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcsequence.lo `test -f 'ensqcsequence.c' || echo './'`ensqcsequence.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcsequence.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcsequence.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcsubmission.lo `test -f 'ensqcsubmission.c' || echo './'`ensqcsubmission.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcsubmission.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcsubmission.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensqcvariation.lo `test -f 'ensqcvariation.c' || echo './'`ensqcvariation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensqcvariation.c  -fPIC -DPIC -o .libs/libensembl_la-ensqcvariation.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensregistry.lo `test -f 'ensregistry.c' || echo './'`ensregistry.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensregistry.c  -fPIC -DPIC -o .libs/libensembl_la-ensregistry.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensrepeat.lo `test -f 'ensrepeat.c' || echo './'`ensrepeat.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensrepeat.c  -fPIC -DPIC -o .libs/libensembl_la-ensrepeat.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensseqregion.lo `test -f 'ensseqregion.c' || echo './'`ensseqregion.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensseqregion.c  -fPIC -DPIC -o .libs/libensembl_la-ensseqregion.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enssequence.lo `test -f 'enssequence.c' || echo './'`enssequence.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enssequence.c  -fPIC -DPIC -o .libs/libensembl_la-enssequence.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enssequenceedit.lo `test -f 'enssequenceedit.c' || echo './'`enssequenceedit.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enssequenceedit.c  -fPIC -DPIC -o .libs/libensembl_la-enssequenceedit.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enssimple.lo `test -f 'enssimple.c' || echo './'`enssimple.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enssimple.c  -fPIC -DPIC -o .libs/libensembl_la-enssimple.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensslice.lo `test -f 'ensslice.c' || echo './'`ensslice.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensslice.c  -fPIC -DPIC -o .libs/libensembl_la-ensslice.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enssoftware.lo `test -f 'enssoftware.c' || echo './'`enssoftware.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enssoftware.c  -fPIC -DPIC -o .libs/libensembl_la-enssoftware.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensstorable.lo `test -f 'ensstorable.c' || echo './'`ensstorable.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensstorable.c  -fPIC -DPIC -o .libs/libensembl_la-ensstorable.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enstable.lo `test -f 'enstable.c' || echo './'`enstable.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enstable.c  -fPIC -DPIC -o .libs/libensembl_la-enstable.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enstranscript.lo `test -f 'enstranscript.c' || echo './'`enstranscript.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enstranscript.c  -fPIC -DPIC -o .libs/libensembl_la-enstranscript.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-enstranslation.lo `test -f 'enstranslation.c' || echo './'`enstranslation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c enstranslation.c  -fPIC -DPIC -o .libs/libensembl_la-enstranslation.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensutility.lo `test -f 'ensutility.c' || echo './'`ensutility.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensutility.c  -fPIC -DPIC -o .libs/libensembl_la-ensutility.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/core  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libensembl_la-ensvariation.lo `test -f 'ensvariation.c' || echo './'`ensvariation.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ensvariation.c  -fPIC -DPIC -o .libs/libensembl_la-ensvariation.o
/bin/sh ../../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0  -Wl,-O1 -Wl,--as-needed -o libensembl.la -rpath /usr/lib libensembl_la-ensalign.lo libensembl_la-ensanalysis.lo libensembl_la-ensassembly.lo libensembl_la-ensassemblyexception.lo libensembl_la-ensassemblymapper.lo libensembl_la-ensattribute.lo libensembl_la-ensbaseadaptor.lo libensembl_la-enscache.lo libensembl_la-enscoordsystem.lo libensembl_la-ensdatabaseadaptor.lo libensembl_la-ensdatabaseconnection.lo libensembl_la-ensdatabaseentry.lo libensembl_la-ensdensity.lo libensembl_la-ensditag.lo libensembl_la-ensexon.lo libensembl_la-ensexternaldatabase.lo libensembl_la-ensfeature.lo libensembl_la-ensgene.lo libensembl_la-ensgvallele.lo libensembl_la-ensgvattribute.lo libensembl_la-ensgvbaseadaptor.lo libensembl_la-ensgvdatabaseadaptor.lo libensembl_la-ensgvgenotype.lo libensembl_la-ensgvindividual.lo libensembl_la-ensgvpopulation.lo libensembl_la-ensgvsample.lo libensembl_la-ensgvsource.lo libensembl_la-ensgvsynonym.lo libensembl_la-ensgvvariation.lo libensembl_la-ensintron.lo libensembl_la-enskaryotype.lo libensembl_la-ensmapper.lo libensembl_la-ensmarker.lo libensembl_la-ensmetacoordinate.lo libensembl_la-ensmetainformation.lo libensembl_la-ensmiscellaneous.lo libensembl_la-ensontology.lo libensembl_la-ensoperon.lo libensembl_la-ensprediction.lo libensembl_la-ensprojectionsegment.lo libensembl_la-ensprotein.lo libensembl_la-ensqc.lo libensembl_la-ensqcalignment.lo libensembl_la-ensqcdasfeature.lo libensembl_la-ensqcdatabase.lo libensembl_la-ensqcsequence.lo libensembl_la-ensqcsubmission.lo libensembl_la-ensqcvariation.lo libensembl_la-ensregistry.lo libensembl_la-ensrepeat.lo libensembl_la-ensseqregion.lo libensembl_la-enssequence.lo libensembl_la-enssequenceedit.lo libensembl_la-enssimple.lo libensembl_la-ensslice.lo libensembl_la-enssoftware.lo libensembl_la-ensstorable.lo libensembl_la-enstable.lo libensembl_la-enstranscript.lo libensembl_la-enstranslation.lo libensembl_la-ensutility.lo libensembl_la-ensvariation.lo ../core/libajax.la -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libensembl_la-ensalign.o .libs/libensembl_la-ensanalysis.o .libs/libensembl_la-ensassembly.o .libs/libensembl_la-ensassemblyexception.o .libs/libensembl_la-ensassemblymapper.o .libs/libensembl_la-ensattribute.o .libs/libensembl_la-ensbaseadaptor.o .libs/libensembl_la-enscache.o .libs/libensembl_la-enscoordsystem.o .libs/libensembl_la-ensdatabaseadaptor.o .libs/libensembl_la-ensdatabaseconnection.o .libs/libensembl_la-ensdatabaseentry.o .libs/libensembl_la-ensdensity.o .libs/libensembl_la-ensditag.o .libs/libensembl_la-ensexon.o .libs/libensembl_la-ensexternaldatabase.o .libs/libensembl_la-ensfeature.o .libs/libensembl_la-ensgene.o .libs/libensembl_la-ensgvallele.o .libs/libensembl_la-ensgvattribute.o .libs/libensembl_la-ensgvbaseadaptor.o .libs/libensembl_la-ensgvdatabaseadaptor.o .libs/libensembl_la-ensgvgenotype.o .libs/libensembl_la-ensgvindividual.o .libs/libensembl_la-ensgvpopulation.o .libs/libensembl_la-ensgvsample.o .libs/libensembl_la-ensgvsource.o .libs/libensembl_la-ensgvsynonym.o .libs/libensembl_la-ensgvvariation.o .libs/libensembl_la-ensintron.o .libs/libensembl_la-enskaryotype.o .libs/libensembl_la-ensmapper.o .libs/libensembl_la-ensmarker.o .libs/libensembl_la-ensmetacoordinate.o .libs/libensembl_la-ensmetainformation.o .libs/libensembl_la-ensmiscellaneous.o .libs/libensembl_la-ensontology.o .libs/libensembl_la-ensoperon.o .libs/libensembl_la-ensprediction.o .libs/libensembl_la-ensprojectionsegment.o .libs/libensembl_la-ensprotein.o .libs/libensembl_la-ensqc.o .libs/libensembl_la-ensqcalignment.o .libs/libensembl_la-ensqcdasfeature.o .libs/libensembl_la-ensqcdatabase.o .libs/libensembl_la-ensqcsequence.o .libs/libensembl_la-ensqcsubmission.o .libs/libensembl_la-ensqcvariation.o .libs/libensembl_la-ensregistry.o .libs/libensembl_la-ensrepeat.o .libs/libensembl_la-ensseqregion.o .libs/libensembl_la-enssequence.o .libs/libensembl_la-enssequenceedit.o .libs/libensembl_la-enssimple.o .libs/libensembl_la-ensslice.o .libs/libensembl_la-enssoftware.o .libs/libensembl_la-ensstorable.o .libs/libensembl_la-enstable.o .libs/libensembl_la-enstranscript.o .libs/libensembl_la-enstranslation.o .libs/libensembl_la-ensutility.o .libs/libensembl_la-ensvariation.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,--as-needed ../core/.libs/libajax.so -lexpat -lpcre -lz -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libensembl.so.6 -o .libs/libensembl.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libensembl.so.6" && ln -s "libensembl.so.6.0.5" "libensembl.so.6")
libtool: link: (cd ".libs" && rm -f "libensembl.so" && ln -s "libensembl.so.6.0.5" "libensembl.so")
libtool: link: ( cd ".libs" && rm -f "libensembl.la" && ln -s "../libensembl.la" "libensembl.la" )
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl'
Making all in ajaxdb
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb'
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajassemdb.lo `test -f 'ajassemdb.c' || echo './'`ajassemdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajassemdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajassemdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajdas.lo `test -f 'ajdas.c' || echo './'`ajdas.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajdas.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajdas.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajfeatdb.lo `test -f 'ajfeatdb.c' || echo './'`ajfeatdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajfeatdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajfeatdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajmart.lo `test -f 'ajmart.c' || echo './'`ajmart.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajmart.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajmart.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajobodb.lo `test -f 'ajobodb.c' || echo './'`ajobodb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajobodb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajobodb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajrefseqdb.lo `test -f 'ajrefseqdb.c' || echo './'`ajrefseqdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajrefseqdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajrefseqdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajresourcedb.lo `test -f 'ajresourcedb.c' || echo './'`ajresourcedb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajresourcedb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajresourcedb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajseqdb.lo `test -f 'ajseqdb.c' || echo './'`ajseqdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajseqdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajseqdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajsoap.lo `test -f 'ajsoap.c' || echo './'`ajsoap.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajsoap.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajsoap.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajtaxdb.lo `test -f 'ajtaxdb.c' || echo './'`ajtaxdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtaxdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajtaxdb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajtextdb.lo `test -f 'ajtextdb.c' || echo './'`ajtextdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajtextdb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajtextdb.o
ajtextdb.c: In function ‘textAccessSrswww’:
ajtextdb.c:3874:20: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
 3874 |                 if(isdigit((int)*cp))
      |                    ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajurldb.lo `test -f 'ajurldb.c' || echo './'`ajurldb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajurldb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajurldb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajvardb.lo `test -f 'ajvardb.c' || echo './'`ajvardb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajvardb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajvardb.o
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ensembl -I../../ajax/core   -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libajaxdb_la-ajxmldb.lo `test -f 'ajxmldb.c' || echo './'`ajxmldb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ensembl -I../../ajax/core -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajxmldb.c  -fPIC -DPIC -o .libs/libajaxdb_la-ajxmldb.o
/bin/sh ../../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0   -Wl,-O1 -Wl,--as-needed -o libajaxdb.la -rpath /usr/lib libajaxdb_la-ajassemdb.lo libajaxdb_la-ajdas.lo libajaxdb_la-ajfeatdb.lo libajaxdb_la-ajmart.lo libajaxdb_la-ajobodb.lo libajaxdb_la-ajrefseqdb.lo libajaxdb_la-ajresourcedb.lo libajaxdb_la-ajseqdb.lo libajaxdb_la-ajsoap.lo libajaxdb_la-ajtaxdb.lo libajaxdb_la-ajtextdb.lo libajaxdb_la-ajurldb.lo libajaxdb_la-ajvardb.lo libajaxdb_la-ajxmldb.lo ../core/libajax.la ../ensembl/libensembl.la -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libajaxdb_la-ajassemdb.o .libs/libajaxdb_la-ajdas.o .libs/libajaxdb_la-ajfeatdb.o .libs/libajaxdb_la-ajmart.o .libs/libajaxdb_la-ajobodb.o .libs/libajaxdb_la-ajrefseqdb.o .libs/libajaxdb_la-ajresourcedb.o .libs/libajaxdb_la-ajseqdb.o .libs/libajaxdb_la-ajsoap.o .libs/libajaxdb_la-ajtaxdb.o .libs/libajaxdb_la-ajtextdb.o .libs/libajaxdb_la-ajurldb.o .libs/libajaxdb_la-ajvardb.o .libs/libajaxdb_la-ajxmldb.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs -L/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,--as-needed ../core/.libs/libajax.so ../ensembl/.libs/libensembl.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libajaxdb.so.6 -o .libs/libajaxdb.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libajaxdb.so.6" && ln -s "libajaxdb.so.6.0.5" "libajaxdb.so.6")
libtool: link: (cd ".libs" && rm -f "libajaxdb.so" && ln -s "libajaxdb.so.6.0.5" "libajaxdb.so")
libtool: link: ( cd ".libs" && rm -f "libajaxdb.la" && ln -s "../libajaxdb.la" "libajaxdb.la" )
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb'
Making all in acd
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd'
/bin/sh ../../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core  -I../../ajax/ajaxdb -I../../ajax/core -I../../ajax/ensembl -I../../ajax/graphics  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libacd_la-ajacd.lo `test -f 'ajacd.c' || echo './'`ajacd.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../../ajax/core -I../../ajax/ajaxdb -I../../ajax/core -I../../ajax/ensembl -I../../ajax/graphics -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c ajacd.c  -fPIC -DPIC -o .libs/libacd_la-ajacd.o
ajacd.c: In function ‘acdGetAttr’:
ajacd.c:26350:8: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
26350 |     if(isdigit((ajint)*--cq))
      |        ^~~~~~~
ajacd.c: In function ‘acdValidAppl’:
ajacd.c:32797:6: warning: implicit declaration of function ‘isupper’ [-Wimplicit-function-declaration]
32797 |  if(!isupper((int)ajStrGetCharFirst(thys->AttrStr[i])))
      |      ^~~~~~~
ajacd.c:32799:10: warning: implicit declaration of function ‘islower’ [-Wimplicit-function-declaration]
32799 |      if (islower((int)ajStrGetCharFirst(thys->AttrStr[i])))
      |          ^~~~~~~
/bin/sh ../../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0  -Wl,-O1 -Wl,--as-needed -o libacd.la -rpath /usr/lib libacd_la-ajacd.lo ../core/libajax.la ../graphics/libajaxg.la -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libacd_la-ajacd.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs -L/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,--as-needed ../core/.libs/libajax.so ../graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libacd.so.6 -o .libs/libacd.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libacd.so.6" && ln -s "libacd.so.6.0.5" "libacd.so.6")
libtool: link: (cd ".libs" && rm -f "libacd.so" && ln -s "libacd.so.6.0.5" "libacd.so")
libtool: link: ( cd ".libs" && rm -f "libacd.la" && ln -s "../libacd.la" "libacd.la" )
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd'
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax'
make[2]: Nothing to be done for 'all-am'.
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax'
make[1]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax'
Making all in nucleus
make[1]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/nucleus'
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embaln.lo `test -f 'embaln.c' || echo './'`embaln.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embaln.c  -fPIC -DPIC -o .libs/libnucleus_la-embaln.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embcom.lo `test -f 'embcom.c' || echo './'`embcom.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embcom.c  -fPIC -DPIC -o .libs/libnucleus_la-embcom.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embcons.lo `test -f 'embcons.c' || echo './'`embcons.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embcons.c  -fPIC -DPIC -o .libs/libnucleus_la-embcons.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embdata.lo `test -f 'embdata.c' || echo './'`embdata.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embdata.c  -fPIC -DPIC -o .libs/libnucleus_la-embdata.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embdbi.lo `test -f 'embdbi.c' || echo './'`embdbi.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embdbi.c  -fPIC -DPIC -o .libs/libnucleus_la-embdbi.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embdmx.lo `test -f 'embdmx.c' || echo './'`embdmx.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embdmx.c  -fPIC -DPIC -o .libs/libnucleus_la-embdmx.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embdomain.lo `test -f 'embdomain.c' || echo './'`embdomain.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embdomain.c  -fPIC -DPIC -o .libs/libnucleus_la-embdomain.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embest.lo `test -f 'embest.c' || echo './'`embest.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embest.c  -fPIC -DPIC -o .libs/libnucleus_la-embest.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embexit.lo `test -f 'embexit.c' || echo './'`embexit.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embexit.c  -fPIC -DPIC -o .libs/libnucleus_la-embexit.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embgroup.lo `test -f 'embgroup.c' || echo './'`embgroup.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embgroup.c  -fPIC -DPIC -o .libs/libnucleus_la-embgroup.o
embgroup.c: In function ‘grpParse’:
embgroup.c:679:10: warning: implicit declaration of function ‘tolower’ [-Wimplicit-function-declaration]
  679 |       if(tolower((int)(ajStrGetPtr(tmpvalue))[0]) == 'n')
      |          ^~~~~~~
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embiep.lo `test -f 'embiep.c' || echo './'`embiep.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embiep.c  -fPIC -DPIC -o .libs/libnucleus_la-embiep.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embindex.lo `test -f 'embindex.c' || echo './'`embindex.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embindex.c  -fPIC -DPIC -o .libs/libnucleus_la-embindex.o
embindex.c: In function ‘embBtreeEmblAC’:
embindex.c:826:12: warning: implicit declaration of function ‘isdigit’ [-Wimplicit-function-declaration]
  826 |      while(isdigit((int)*(--q)));
      |            ^~~~~~~
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embinit.lo `test -f 'embinit.c' || echo './'`embinit.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embinit.c  -fPIC -DPIC -o .libs/libnucleus_la-embinit.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embmat.lo `test -f 'embmat.c' || echo './'`embmat.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embmat.c  -fPIC -DPIC -o .libs/libnucleus_la-embmat.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embmisc.lo `test -f 'embmisc.c' || echo './'`embmisc.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embmisc.c  -fPIC -DPIC -o .libs/libnucleus_la-embmisc.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embmol.lo `test -f 'embmol.c' || echo './'`embmol.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embmol.c  -fPIC -DPIC -o .libs/libnucleus_la-embmol.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embnmer.lo `test -f 'embnmer.c' || echo './'`embnmer.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embnmer.c  -fPIC -DPIC -o .libs/libnucleus_la-embnmer.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embpat.lo `test -f 'embpat.c' || echo './'`embpat.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embpat.c  -fPIC -DPIC -o .libs/libnucleus_la-embpat.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embpatlist.lo `test -f 'embpatlist.c' || echo './'`embpatlist.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embpatlist.c  -fPIC -DPIC -o .libs/libnucleus_la-embpatlist.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embprop.lo `test -f 'embprop.c' || echo './'`embprop.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embprop.c  -fPIC -DPIC -o .libs/libnucleus_la-embprop.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embpdb.lo `test -f 'embpdb.c' || echo './'`embpdb.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embpdb.c  -fPIC -DPIC -o .libs/libnucleus_la-embpdb.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embread.lo `test -f 'embread.c' || echo './'`embread.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embread.c  -fPIC -DPIC -o .libs/libnucleus_la-embread.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embsig.lo `test -f 'embsig.c' || echo './'`embsig.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embsig.c  -fPIC -DPIC -o .libs/libnucleus_la-embsig.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embshow.lo `test -f 'embshow.c' || echo './'`embshow.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embshow.c  -fPIC -DPIC -o .libs/libnucleus_la-embshow.o
/bin/sh ../libtool  --tag=CC   --mode=compile x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/core  -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH  -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o libnucleus_la-embword.lo `test -f 'embword.c' || echo './'`embword.c
libtool: compile:  x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core -I../ajax/core -I../ajax/graphics -I../ajax/ensembl -I../ajax/ajaxdb -I../ajax/acd -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -c embword.c  -fPIC -DPIC -o .libs/libnucleus_la-embword.o
embword.c: In function ‘wordStrHash’:
embword.c:139:12: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration]
  139 |  hashval = toupper((ajint)*s) + 31 *hashval;
      |            ^~~~~~~
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc     -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -version-info 6:5:0  -Wl,-O1 -Wl,--as-needed -o libnucleus.la -rpath /usr/lib libnucleus_la-embaln.lo libnucleus_la-embcom.lo libnucleus_la-embcons.lo libnucleus_la-embdata.lo libnucleus_la-embdbi.lo libnucleus_la-embdmx.lo libnucleus_la-embdomain.lo libnucleus_la-embest.lo libnucleus_la-embexit.lo libnucleus_la-embgroup.lo libnucleus_la-embiep.lo libnucleus_la-embindex.lo libnucleus_la-embinit.lo libnucleus_la-embmat.lo libnucleus_la-embmisc.lo libnucleus_la-embmol.lo libnucleus_la-embnmer.lo libnucleus_la-embpat.lo libnucleus_la-embpatlist.lo libnucleus_la-embprop.lo libnucleus_la-embpdb.lo libnucleus_la-embread.lo libnucleus_la-embsig.lo libnucleus_la-embshow.lo libnucleus_la-embword.lo ../ajax/core/libajax.la ../ajax/ajaxdb/libajaxdb.la ../ajax/acd/libacd.la -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -shared  -fPIC -DPIC  .libs/libnucleus_la-embaln.o .libs/libnucleus_la-embcom.o .libs/libnucleus_la-embcons.o .libs/libnucleus_la-embdata.o .libs/libnucleus_la-embdbi.o .libs/libnucleus_la-embdmx.o .libs/libnucleus_la-embdomain.o .libs/libnucleus_la-embest.o .libs/libnucleus_la-embexit.o .libs/libnucleus_la-embgroup.o .libs/libnucleus_la-embiep.o .libs/libnucleus_la-embindex.o .libs/libnucleus_la-embinit.o .libs/libnucleus_la-embmat.o .libs/libnucleus_la-embmisc.o .libs/libnucleus_la-embmol.o .libs/libnucleus_la-embnmer.o .libs/libnucleus_la-embpat.o .libs/libnucleus_la-embpatlist.o .libs/libnucleus_la-embprop.o .libs/libnucleus_la-embpdb.o .libs/libnucleus_la-embread.o .libs/libnucleus_la-embsig.o .libs/libnucleus_la-embshow.o .libs/libnucleus_la-embword.o   -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs -Wl,-rpath -Wl,/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs -L/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs -L/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs -L/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs -Wl,--as-needed ../ajax/core/.libs/libajax.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm  -O2 -march=native -O2 -Wl,-O1   -Wl,-soname -Wl,libnucleus.so.6 -o .libs/libnucleus.so.6.0.5
libtool: link: (cd ".libs" && rm -f "libnucleus.so.6" && ln -s "libnucleus.so.6.0.5" "libnucleus.so.6")
libtool: link: (cd ".libs" && rm -f "libnucleus.so" && ln -s "libnucleus.so.6.0.5" "libnucleus.so")
libtool: link: ( cd ".libs" && rm -f "libnucleus.la" && ln -s "../libnucleus.la" "libnucleus.la" )
make[1]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/nucleus'
Making all in emboss
make[1]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss'
Making all in acd
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/acd'
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Making all in data
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data'
Making all in AAINDEX
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/AAINDEX'
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make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/AAINDEX'
Making all in CODONS
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/CODONS'
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Making all in JASPAR_CNE
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_CNE'
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Making all in JASPAR_CORE
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_CORE'
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make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_CORE'
Making all in JASPAR_FAM
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_FAM'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_FAM'
Making all in JASPAR_PBM
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM'
Making all in JASPAR_PBM_HLH
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM_HLH'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM_HLH'
Making all in JASPAR_PBM_HOMEO
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM_HOMEO'
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make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PBM_HOMEO'
Making all in JASPAR_PHYLOFACTS
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PHYLOFACTS'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_PHYLOFACTS'
Making all in JASPAR_POLII
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_POLII'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_POLII'
Making all in JASPAR_SPLICE
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_SPLICE'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/JASPAR_SPLICE'
Making all in OBO
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/OBO'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/OBO'
Making all in PRINTS
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/PRINTS'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/PRINTS'
Making all in PROSITE
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/PROSITE'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/PROSITE'
Making all in REBASE
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/REBASE'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/REBASE'
Making all in TAXONOMY
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/TAXONOMY'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data/TAXONOMY'
make[3]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data'
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/data'
Making all in index
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/index'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss/index'
make[2]: Entering directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss'
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o aaindexextract.o aaindexextract.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o aaindexextract aaindexextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/aaindexextract aaindexextract.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o abiview.o abiview.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o abiview abiview.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/abiview abiview.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdc.o acdc.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdc acdc.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdc acdc.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdgalaxy.o acdgalaxy.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdgalaxy acdgalaxy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdgalaxy acdgalaxy.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdlog.o acdlog.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdlog acdlog.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdlog acdlog.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdpretty.o acdpretty.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdpretty acdpretty.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdpretty acdpretty.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdtable.o acdtable.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdtable acdtable.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdtable acdtable.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdtrace.o acdtrace.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdtrace acdtrace.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdtrace acdtrace.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o acdvalid.o acdvalid.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o acdvalid acdvalid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/acdvalid acdvalid.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o aligncopy.o aligncopy.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o aligncopy aligncopy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/aligncopy aligncopy.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o aligncopypair.o aligncopypair.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o aligncopypair aligncopypair.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/aligncopypair aligncopypair.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o antigenic.o antigenic.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o antigenic antigenic.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/antigenic antigenic.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o assemblyget.o assemblyget.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o assemblyget assemblyget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/assemblyget assemblyget.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o backtranambig.o backtranambig.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o backtranambig backtranambig.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/backtranambig backtranambig.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o backtranseq.o backtranseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o backtranseq backtranseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/backtranseq backtranseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o banana.o banana.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o banana banana.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/banana banana.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o biosed.o biosed.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o biosed biosed.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/biosed biosed.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o btwisted.o btwisted.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o btwisted btwisted.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/btwisted btwisted.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cachedas.o cachedas.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cachedas cachedas.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cachedas cachedas.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cachedbfetch.o cachedbfetch.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cachedbfetch cachedbfetch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cachedbfetch cachedbfetch.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cacheebeyesearch.o cacheebeyesearch.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cacheebeyesearch cacheebeyesearch.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cacheebeyesearch cacheebeyesearch.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cacheensembl.o cacheensembl.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cacheensembl cacheensembl.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cacheensembl cacheensembl.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cai.o cai.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cai cai.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cai cai.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o chaos.o chaos.c
chaos.c: In function ‘main’:
chaos.c:107:27: warning: passing argument 2 of ‘ajGraphicsDrawsetLines’ from incompatible pointer type [-Wincompatible-pointer-types]
  107 |  ajGraphicsDrawsetLines(1,&x,&y,&x2,&y);
      |                           ^~
      |                           |
      |                           float *
In file included from ../nucleus/emboss.h:31,
                 from chaos.c:21:
../ajax/graphics/ajgraph.h:184:57: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
  184 | void          ajGraphicsDrawsetLines(ajuint num, PLFLT *xx,PLFLT *yy,
      |                                                  ~~~~~~~^~
chaos.c:107:30: warning: passing argument 3 of ‘ajGraphicsDrawsetLines’ from incompatible pointer type [-Wincompatible-pointer-types]
  107 |  ajGraphicsDrawsetLines(1,&x,&y,&x2,&y);
      |                              ^~
      |                              |
      |                              float *
In file included from ../nucleus/emboss.h:31,
                 from chaos.c:21:
../ajax/graphics/ajgraph.h:184:67: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
  184 | void          ajGraphicsDrawsetLines(ajuint num, PLFLT *xx,PLFLT *yy,
      |                                                            ~~~~~~~^~
chaos.c:107:33: warning: passing argument 4 of ‘ajGraphicsDrawsetLines’ from incompatible pointer type [-Wincompatible-pointer-types]
  107 |  ajGraphicsDrawsetLines(1,&x,&y,&x2,&y);
      |                                 ^~~
      |                                 |
      |                                 float *
In file included from ../nucleus/emboss.h:31,
                 from chaos.c:21:
../ajax/graphics/ajgraph.h:185:45: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
  185 |                                      PLFLT *xx2,PLFLT *yy2);
      |                                      ~~~~~~~^~~
chaos.c:107:37: warning: passing argument 5 of ‘ajGraphicsDrawsetLines’ from incompatible pointer type [-Wincompatible-pointer-types]
  107 |  ajGraphicsDrawsetLines(1,&x,&y,&x2,&y);
      |                                     ^~
      |                                     |
      |                                     float *
In file included from ../nucleus/emboss.h:31,
                 from chaos.c:21:
../ajax/graphics/ajgraph.h:185:56: note: expected ‘PLFLT *’ {aka ‘double *’} but argument is of type ‘float *’
  185 |                                      PLFLT *xx2,PLFLT *yy2);
      |                                                 ~~~~~~~^~~
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o chaos chaos.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/chaos chaos.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o charge.o charge.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o charge charge.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/charge charge.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o checktrans.o checktrans.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o checktrans checktrans.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/checktrans checktrans.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o chips.o chips.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o chips chips.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/chips chips.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cirdna.o cirdna.c
cirdna.c: In function ‘cirdna_DrawRuler’:
cirdna.c:867:5: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  867 |  xy = ajGraphicsCalcCoord(xDraw, yDraw, Radius, Angle);
      |     ^
cirdna.c:886:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  886 |   xy = ajGraphicsCalcCoord(xDraw, yDraw, Radius, Angle);
      |      ^
cirdna.c: In function ‘cirdna_DrawTicks’:
cirdna.c:953:9: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  953 |     xy1 = ajGraphicsCalcCoord(xDraw, yDraw, r1Ticks, Angle);
      |         ^
cirdna.c:954:9: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  954 |     xy2 = ajGraphicsCalcCoord(xDraw, yDraw, r2Ticks, Angle);
      |         ^
cirdna.c:974:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  974 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, r2Ticks+postext, Angle);
      |      ^
cirdna.c:975:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  975 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, r2Ticks+postext+stringLength,
      |      ^
cirdna.c:977:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
  977 |  xy3 = ajGraphicsCalcCoord(xDraw, yDraw, r2Ticks+postext-stringLength,
      |      ^
cirdna.c: In function ‘cirdna_DrawArrowHeadsOncurve’:
cirdna.c:1320:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1320 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius, Angle);
      |      ^
cirdna.c:1321:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1321 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius+middle, Angle+pos);
      |      ^
cirdna.c:1324:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1324 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius-middle, Angle+pos);
      |      ^
cirdna.c:1332:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1332 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius+middle, Angle-pos);
      |      ^
cirdna.c:1333:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1333 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius, Angle);
      |      ^
cirdna.c:1336:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1336 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius-middle, Angle-pos);
      |      ^
cirdna.c: In function ‘cirdna_DrawBracketsOncurve’:
cirdna.c:1381:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1381 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius+middle, Angle);
      |      ^
cirdna.c:1382:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1382 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius-middle, Angle);
      |      ^
cirdna.c:1393:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1393 |  xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius+middle, Angle);
      |      ^
cirdna.c:1394:6: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1394 |  xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius-middle, Angle);
      |      ^
cirdna.c: In function ‘cirdna_DrawBarsOncurve’:
cirdna.c:1431:9: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1431 |     xy1 = ajGraphicsCalcCoord(xDraw, yDraw, Radius+middle, Angle);
      |         ^
cirdna.c:1432:9: warning: assignment to ‘float *’ from incompatible pointer type ‘PLFLT *’ {aka ‘double *’} [-Wincompatible-pointer-types]
 1432 |     xy2 = ajGraphicsCalcCoord(xDraw, yDraw, Radius-middle, Angle);
      |         ^
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cirdna cirdna.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cirdna cirdna.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o codcmp.o codcmp.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o codcmp codcmp.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/codcmp codcmp.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o codcopy.o codcopy.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o codcopy codcopy.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/codcopy codcopy.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o coderet.o coderet.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o coderet coderet.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/coderet coderet.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o compseq.o compseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o compseq compseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/compseq compseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cons.o cons.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cons cons.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cons cons.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o consambig.o consambig.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o consambig consambig.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/consambig consambig.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cpgplot.o cpgplot.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cpgplot cpgplot.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cpgplot cpgplot.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cpgreport.o cpgreport.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cpgreport cpgreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cpgreport cpgreport.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cusp.o cusp.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cusp cusp.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cusp cusp.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cutgextract.o cutgextract.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cutgextract cutgextract.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cutgextract cutgextract.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o cutseq.o cutseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o cutseq cutseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/cutseq cutseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dan.o dan.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dan dan.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dan dan.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbiblast.o dbiblast.c
In file included from dbiblast.c:58:
/usr/include/sys/fcntl.h:1:2: warning: #warning redirecting incorrect #include <sys/fcntl.h> to <fcntl.h> [-Wcpp]
    1 | #warning redirecting incorrect #include <sys/fcntl.h> to <fcntl.h>
      |  ^~~~~~~
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbiblast dbiblast.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbiblast dbiblast.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbifasta.o dbifasta.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbifasta dbifasta.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbifasta dbifasta.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbiflat.o dbiflat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbiflat dbiflat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbiflat dbiflat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbigcg.o dbigcg.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbigcg dbigcg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbigcg dbigcg.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbtell.o dbtell.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbtell dbtell.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbtell dbtell.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxcompress.o dbxcompress.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxcompress dbxcompress.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxcompress dbxcompress.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxedam.o dbxedam.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxedam dbxedam.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxedam dbxedam.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxfasta.o dbxfasta.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxfasta dbxfasta.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxfasta dbxfasta.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxflat.o dbxflat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxflat dbxflat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxflat dbxflat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxgcg.o dbxgcg.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxgcg dbxgcg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxgcg dbxgcg.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxobo.o dbxobo.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxobo dbxobo.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxobo dbxobo.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxreport.o dbxreport.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxreport dbxreport.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxreport dbxreport.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxresource.o dbxresource.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxresource dbxresource.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxresource dbxresource.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxstat.o dbxstat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxstat dbxstat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxstat dbxstat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxtax.o dbxtax.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxtax dbxtax.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxtax dbxtax.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dbxuncompress.o dbxuncompress.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dbxuncompress dbxuncompress.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dbxuncompress dbxuncompress.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o degapseq.o degapseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o degapseq degapseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/degapseq degapseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o density.o density.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o density density.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/density density.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o descseq.o descseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o descseq descseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/descseq descseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o diffseq.o diffseq.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o diffseq diffseq.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/diffseq diffseq.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o distmat.o distmat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o distmat distmat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/distmat distmat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dotmatcher.o dotmatcher.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dotmatcher dotmatcher.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dotmatcher dotmatcher.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dotpath.o dotpath.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dotpath dotpath.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dotpath dotpath.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dottup.o dottup.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dottup dottup.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dottup dottup.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o dreg.o dreg.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o dreg dreg.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/dreg dreg.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drfinddata.o drfinddata.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drfinddata drfinddata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drfinddata drfinddata.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drfindformat.o drfindformat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drfindformat drfindformat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drfindformat drfindformat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drfindid.o drfindid.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drfindid drfindid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drfindid drfindid.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drfindresource.o drfindresource.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drfindresource drfindresource.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drfindresource drfindresource.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drget.o drget.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drget drget.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drget drget.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o drtext.o drtext.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o drtext drtext.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/drtext drtext.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamdef.o edamdef.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamdef edamdef.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamdef edamdef.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamhasinput.o edamhasinput.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamhasinput edamhasinput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamhasinput edamhasinput.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamhasoutput.o edamhasoutput.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamhasoutput edamhasoutput.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamhasoutput edamhasoutput.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamisformat.o edamisformat.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamisformat edamisformat.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamisformat edamisformat.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamisid.o edamisid.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamisid edamisid.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamisid edamisid.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edamname.o edamname.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edamname edamname.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edamname edamname.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o edialign.o edialign.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o edialign edialign.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/edialign edialign.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o einverted.o einverted.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o einverted einverted.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/einverted einverted.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o embossdata.o embossdata.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o embossdata embossdata.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/embossdata embossdata.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o embossupdate.o embossupdate.c
/bin/sh ../libtool  --tag=CC   --mode=link x86_64-gentoo-linux-musl-gcc    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2  -Wl,-O1 -Wl,--as-needed -o embossupdate embossupdate.o ../nucleus/libnucleus.la ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la  -lexpat  -lpcre  -lz  -lplplot   -lm 
libtool: link: x86_64-gentoo-linux-musl-gcc -I/usr/include/plplot -O2 -pipe -march=native -fno-common -falign-functions=32:25:16 -O2 -Wl,-O1 -o .libs/embossupdate embossupdate.o  -Wl,--as-needed ../nucleus/.libs/libnucleus.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/acd/.libs/libacd.so ../ajax/acd/.libs/libacd.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/graphics/.libs/libajaxg.so ../ajax/ajaxdb/.libs/libajaxdb.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/ensembl/.libs/libensembl.so ../ajax/ensembl/.libs/libensembl.so ../ajax/graphics/.libs/libajaxg.so /var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/ajax/core/.libs/libajax.so ../ajax/core/.libs/libajax.so -lexpat -lpcre -lz -lplplot -lm
x86_64-gentoo-linux-musl-gcc -DHAVE_CONFIG_H -I. -I../ajax/core  -I../ajax/acd -I../ajax/ajaxdb -I../ajax/core -I../ajax/ensembl -I../ajax/graphics  -I../nucleus  -DNO_AUTH -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64    -I/usr/include/plplot  -O2 -pipe -march=native -fno-common -falign-functions=32:25:16  -O2 -c -o embossversion.o embossversion.c
embossversion.c: In function ‘main’:
embossversion.c:418:47: error: ‘__USE_FORTIFY_LEVEL’ undeclared (first use in this function)
  418 |  ajFmtPrintF(outfile, "_FORTIFY_SOURCE %d\n", __USE_FORTIFY_LEVEL);
      |                                               ^~~~~~~~~~~~~~~~~~~
embossversion.c:418:47: note: each undeclared identifier is reported only once for each function it appears in
make[2]: *** [Makefile:5107: embossversion.o] Error 1
make[2]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss'
make[1]: *** [Makefile:5157: all-recursive] Error 1
make[1]: Leaving directory '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0/emboss'
make: *** [Makefile:450: all-recursive] Error 1
 * ERROR: sci-biology/emboss-6.6.0-r1::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/emboss-6.6.0-r1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/emboss-6.6.0-r1::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-biology:emboss-6.6.0-r1:20200314-144454.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0'
 * S: '/var/tmp/portage/sci-biology/emboss-6.6.0-r1/work/EMBOSS-6.6.0'