* Package: sci-chemistry/mpqc-2.3.1-r4 * Repository: gentoo * Maintainer: sci-chemistry@gentoo.org * USE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking mpqc-2.3.1.tar.bz2 to /var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work >>> Source unpacked in /var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work >>> Preparing source in /var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work/mpqc-2.3.1 ... * Applying mpqc-2.3.1-as-needed.patch ... [ ok ] * Applying mpqc-2.3.1-respect-ldflags.patch ... [ ok ] * Applying mpqc-2.3.1-test-failure-hack.patch ... [ ok ] * Applying mpqc-2.3.1-blas.patch ... [ ok ] * Applying mpqc-2.3.1-wformat-security.patch ... [ ok ] * Running eautoreconf in '/var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work/mpqc-2.3.1' ... * Running libtoolize --install --copy --force ... [ ok ] * Running aclocal ... [ ok ] * Running autoconf --force ... [ ok ] * Running autoheader ... [ !! ] * Running elibtoolize in: mpqc-2.3.1/ * Running elibtoolize in: mpqc-2.3.1/bin/ * Applying portage/1.2.0 patch ... * Applying sed/1.5.6 patch ... * Applying as-needed/2.4.3 patch ... >>> Source prepared. >>> Configuring source in /var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work/mpqc-2.3.1 ... * econf: updating mpqc-2.3.1/bin/config.sub with /usr/share/gnuconfig/config.sub * econf: updating mpqc-2.3.1/bin/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/mpqc-2.3.1-r4 --htmldir=/usr/share/doc/mpqc-2.3.1-r4/html --libdir=/usr/lib64 --disable-threads --disable-parallel --disable-static checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking whether ln -s works... yes checking for a BSD-compatible install... /usr/lib/portage/python3.6/ebuild-helpers/xattr/install -c checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking for g++... x86_64-pc-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes checking for x86_64-pc-linux-gnu-g77... no checking for x86_64-pc-linux-gnu-xlf... no checking for x86_64-pc-linux-gnu-f77... no checking for x86_64-pc-linux-gnu-frt... no checking for x86_64-pc-linux-gnu-pgf77... no checking for x86_64-pc-linux-gnu-cf77... no checking for x86_64-pc-linux-gnu-fort77... no checking for x86_64-pc-linux-gnu-fl32... no checking for x86_64-pc-linux-gnu-af77... no checking for x86_64-pc-linux-gnu-xlf90... no checking for x86_64-pc-linux-gnu-f90... no checking for x86_64-pc-linux-gnu-pgf90... no checking for x86_64-pc-linux-gnu-pghpf... no checking for x86_64-pc-linux-gnu-epcf90... no checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../.. -lgfortran -lm -lquadmath checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for ar... ar checking for perl... perl checking for wish... /usr/bin/wish checking for dot... 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(cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate Skipping ./src/Makefile Skipping ./src/lib/util/Makefile Skipping ./src/lib/util/state/Makefile Skipping ./src/lib/util/render/Makefile Skipping ./src/lib/util/ref/Makefile Skipping ./src/lib/util/psi3/Makefile Skipping ./src/lib/util/psi3/libpsio/Makefile Skipping ./src/lib/util/options/Makefile Skipping ./src/lib/util/misc/Makefile Skipping ./src/lib/util/keyval/Makefile Skipping ./src/lib/util/group/Makefile Skipping ./src/lib/util/container/Makefile Skipping ./src/lib/util/class/Makefile Skipping ./src/lib/math/symmetry/Makefile Skipping ./src/lib/math/scmat/Makefile Skipping ./src/lib/math/optimize/Makefile Skipping ./src/lib/math/Makefile Skipping ./src/lib/math/isosurf/Makefile Skipping ./src/lib/Makefile Skipping ./src/lib/chemistry/solvent/Makefile Skipping ./src/lib/chemistry/molecule/Makefile Skipping ./src/lib/chemistry/Makefile Skipping ./src/lib/chemistry/qc/Makefile Skipping ./src/lib/chemistry/qc/wfn/Makefile Skipping ./src/lib/chemistry/qc/scf/Makefile Skipping ./src/lib/chemistry/qc/psi/Makefile Skipping ./src/lib/chemistry/qc/oint3/Makefile Skipping ./src/lib/chemistry/qc/mbptr12/Makefile Skipping ./src/lib/chemistry/qc/mbpt/Makefile Skipping ./src/lib/chemistry/qc/intv3/Makefile Skipping ./src/lib/chemistry/qc/intcca/Makefile Skipping ./src/lib/chemistry/qc/dft/Makefile Skipping ./src/lib/chemistry/qc/cints/Makefile Skipping ./src/lib/chemistry/qc/basis/Makefile Skipping ./src/lib/chemistry/cca/Makefile Skipping ./src/bin/scpr/Makefile Skipping ./src/bin/scls/Makefile Skipping ./src/bin/mpqc/Makefile Skipping ./src/bin/mpqc/validate/Makefile Skipping ./src/bin/Makefile Skipping ./src/bin/molrender/Makefile Skipping ./lib/perl/Makefile Skipping ./lib/elisp/Makefile Skipping ./lib/cca/Makefile Skipping ./lib/basis/Makefile Skipping ./lib/Makefile Skipping ./doc/Makefile Skipping ./bin/Makefile Skipping ./Makefile configure: creating ./config.status config.status: creating lib/LocalMakefile config.status: WARNING: 'lib/LocalMakefile.in' seems to ignore the --datarootdir setting config.status: creating lib/cca/components.cca config.status: creating bin/sc-config config.status: creating bin/mkf77sym.pl config.status: creating src/bin/mpqc/mpqcrun config.status: creating src/bin/mpqc/ccarun config.status: creating src/bin/mpqc/validate/makeccain.pl config.status: creating doc/doxygen.cfg config.status: creating doc/doxygen.man1.cfg config.status: creating doc/doxygen.man3.cfg config.status: creating src/lib/scconfig.h config.status: executing libtool commands sed: -e expression #1, char 82: unknown option to `s' * ERROR: sci-chemistry/mpqc-2.3.1-r4::gentoo failed (configure phase): * (no error message) * * Call stack: * ebuild.sh, line 125: Called src_configure * environment, line 1391: Called die * The specific snippet of code: * sed -e "s:^CFLAGS =.*$:CFLAGS=${CFLAGS}:" -e "s:^FFLAGS =.*$:FFLAGS=${FFLAGS:- -O2}:" -e "s:^CXXFLAGS =.*$:CXXFLAGS=${CXXFLAGS}:" -i lib/LocalMakefile || die * * If you need support, post the output of `emerge --info '=sci-chemistry/mpqc-2.3.1-r4::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-chemistry/mpqc-2.3.1-r4::gentoo'`. * The complete build log is located at '/var/log/portage/sci-chemistry:mpqc-2.3.1-r4:20200225-111258.log'. * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/temp/environment'. * Working directory: '/var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work/mpqc-2.3.1' * S: '/var/tmp/portage/sci-chemistry/mpqc-2.3.1-r4/work/mpqc-2.3.1'