Attachment 614300 Details for Bug 710088 – sci-geosciences:gmt-5.4.4:20200218-051014.log

sci-geosciences:gmt-5.4.4:20200218-051014.log

sci-geosciences:gmt-5.4.4:20200218-051014.log (text/plain), 142.19 KB, created by Toralf Förster on 2020-02-18 18:54:33 UTC

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Creator: Toralf Förster

Created: 2020-02-18 18:54:33 UTC

Size: 142.19 KB

patch

obsolete

> * Package:    sci-geosciences/gmt-5.4.4
> * Repository: gentoo
> * Maintainer: sci-geosciences@gentoo.org
> * USE:        abi_x86_64 amd64 elibc_glibc fftw gdal kernel_linux openmp pcre userland_GNU
> * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
>>>> Unpacking source...
>>>> Unpacking gmt-5.4.4-src.tar.xz to /var/tmp/portage/sci-geosciences/gmt-5.4.4/work
>>>> Source unpacked in /var/tmp/portage/sci-geosciences/gmt-5.4.4/work
>>>> Preparing source in /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 ...
> * Working in BUILD_DIR: "/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build"
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/man_release /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4
>>>> Source prepared.
>>>> Configuring source in /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 ...
> * Working in BUILD_DIR: "/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build"
>cmake -C /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DGMT_DATADIR=share/gmt-5.4.4 -DGMT_DOCDIR=share/doc/gmt-5.4.4 -DGMT_MANDIR=share/man -DLICENSE_RESTRICTED=yes -DGMT_OPENMP=yes -DGMT_USE_THREADS=no -DGMT_INSTALL_TRADITIONAL_FOLDERNAMES=OFF -DGMT_INSTALL_MODULE_LINKS=OFF -DBASH_COMPLETION_DIR=/usr/share/bash-completion/completions -DCMAKE_DISABLE_FIND_PACKAGE_GDAL=OFF -DCMAKE_DISABLE_FIND_PACKAGE_FFTW3=OFF -DCMAKE_DISABLE_FIND_PACKAGE_LAPACK=ON -DCMAKE_DISABLE_FIND_PACKAGE_PCRE=OFF -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/gentoo_toolchain.cmake  /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4
>loading initial cache file /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/gentoo_common_config.cmake
>CMake Deprecation Warning at CMakeLists.txt:63 (cmake_policy):
>  The OLD behavior for policy CMP0026 will be removed from a future version
>  of CMake.
>
>  The cmake-policies(7) manual explains that the OLD behaviors of all
>  policies are deprecated and that a policy should be set to OLD only under
>  specific short-term circumstances.  Projects should be ported to the NEW
>  behavior and not rely on setting a policy to OLD.
>
>
>-- The C compiler identification is GNU 9.2.0
>-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc
>-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc -- works
>-- Detecting C compiler ABI info
>-- Detecting C compiler ABI info - done
>-- Detecting C compile features
>-- Detecting C compile features - done
>CMake Warning at cmake/modules/ConfigCMake.cmake:119 (message):
>  unknown license: yes
>Call Stack (most recent call first):
>  CMakeLists.txt:75 (include)
>
>
>-- Found UnixCommands: /bin/bash  
>-- Searching dependent libraries. This may take a few minutes...
>-- Looking for nc_def_var_deflate
>-- Looking for nc_def_var_deflate - found
>-- Found NETCDF: /usr/lib64/libnetcdf.so  
>-- Found CURL: /usr/lib64/libcurl.so (found version "7.68.0")  
>-- Found GDAL: /usr/lib64/libgdal.so  
>-- Found PCRE: /usr/lib64/libpcre.so  
>-- Looking for fftwf_import_wisdom_from_filename
>-- Looking for fftwf_import_wisdom_from_filename - found
>-- Found FFTW3: /usr/lib64/libfftw3f.so  
>-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
>-- Found OpenMP_C: -fopenmp (found version "4.5") 
>-- Found OpenMP: TRUE (found version "4.5")  
>-- Looking for pthread.h
>-- Looking for pthread.h - found
>-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
>-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
>-- Found Threads: TRUE  
>-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "1.6.3") 
>-- Found GLIB: /usr/include/glib-2.0;/usr/lib64/glib-2.0/include (found version "2.60.7") 
>-- User variable GMT_USE_THREADS not set: disabling GThread.
>-- Performing Test HAVE_TRADITIONAL_CPP
>-- Performing Test HAVE_TRADITIONAL_CPP - Failed
>-- Performing Test HAVE___FUNC__
>-- Performing Test HAVE___FUNC__ - Success
>-- Performing Test HAVE___FUNCTION__
>-- Performing Test HAVE___FUNCTION__ - Success
>-- Performing Test HAVE_C_inline
>-- Performing Test HAVE_C_inline - Success
>-- Looking for io.h
>-- Looking for io.h - not found
>-- Looking for direct.h
>-- Looking for direct.h - not found
>-- Looking for process.h
>-- Looking for process.h - not found
>-- Looking for assert.h
>-- Looking for assert.h - found
>-- Looking for dirent.h
>-- Looking for dirent.h - found
>-- Looking for errno.h
>-- Looking for errno.h - found
>-- Looking for execinfo.h
>-- Looking for execinfo.h - found
>-- Looking for fcntl.h
>-- Looking for fcntl.h - found
>-- Looking for signal.h
>-- Looking for signal.h - found
>-- Looking for stdbool.h
>-- Looking for stdbool.h - found
>-- Looking for sys/dir.h
>-- Looking for sys/dir.h - found
>-- Looking for sys/resource.h
>-- Looking for sys/resource.h - found
>-- Looking for sys/stat.h
>-- Looking for sys/stat.h - found
>-- Looking for sys/time.h
>-- Looking for sys/time.h - found
>-- Looking for sys/ucontext.h
>-- Looking for sys/ucontext.h - found
>-- Looking for unistd.h
>-- Looking for unistd.h - found
>-- Looking for fcntl
>-- Looking for fcntl - found
>-- Looking for fopen64
>-- Looking for fopen64 - found
>-- Looking for fseeko
>-- Looking for fseeko - found
>-- Looking for ftello
>-- Looking for ftello - found
>-- Looking for getopt
>-- Looking for getopt - found
>-- Looking for getpwuid
>-- Looking for getpwuid - found
>-- Looking for abs
>-- Looking for abs - found
>-- Looking for llabs
>-- Looking for llabs - found
>-- Looking for pclose
>-- Looking for pclose - found
>-- Looking for popen
>-- Looking for popen - found
>-- Looking for qsort_r
>-- Looking for qsort_r - found
>-- Performing Test HAVE_QSORT_R_GLIBC
>-- Performing Test HAVE_QSORT_R_GLIBC - Success
>-- Looking for strcasecmp
>-- Looking for strcasecmp - found
>-- Looking for strncasecmp
>-- Looking for strncasecmp - found
>-- Looking for stricmp
>-- Looking for stricmp - not found
>-- Looking for strnicmp
>-- Looking for strnicmp - not found
>-- Looking for strdup
>-- Looking for strdup - found
>-- Looking for strndup
>-- Looking for strndup - found
>-- Looking for strsep
>-- Looking for strsep - found
>-- Looking for strtod
>-- Looking for strtod - found
>-- Looking for strtof
>-- Looking for strtof - found
>-- Looking for strtok_r
>-- Looking for strtok_r - found
>-- Looking for strdup
>-- Looking for strdup - found
>-- Looking for strsep
>-- Looking for strsep - found
>-- Looking for basename
>-- Looking for basename - found
>-- Looking for fileno
>-- Looking for fileno - found
>-- Looking for setlocale
>-- Looking for setlocale - found
>-- Looking for snprintf
>-- Looking for snprintf - found
>-- Looking for vsnprintf
>-- Looking for vsnprintf - found
>-- Looking for access
>-- Looking for access - found
>-- Looking for getpid
>-- Looking for getpid - found
>-- Looking for dlopen
>-- Looking for dlopen - not found
>-- Looking for dlopen in dl
>-- Looking for dlopen in dl - found
>-- Looking for dladdr
>-- Looking for dladdr - found
>-- Looking for memalign
>-- Looking for memalign - found
>-- Looking for posix_memalign
>-- Looking for posix_memalign - found
>-- Performing Test HAVE_SC_NPROCESSORS_ONLN
>-- Performing Test HAVE_SC_NPROCESSORS_ONLN - Success
>-- Performing Test HAVE_SC_NPROC_ONLN
>-- Performing Test HAVE_SC_NPROC_ONLN - Failed
>-- Performing Test HAVE_SYSCTL_HW_NCPU
>-- Performing Test HAVE_SYSCTL_HW_NCPU - Failed
>-- Looking for ctype.h
>-- Looking for ctype.h - found
>-- Looking for inttypes.h
>-- Looking for inttypes.h - found
>-- Looking for sys/types.h
>-- Looking for sys/types.h - found
>-- Looking for stdint.h
>-- Looking for stdint.h - found
>-- Looking for stddef.h
>-- Looking for stddef.h - found
>-- Check size of _Bool
>-- Check size of _Bool - done
>-- Check size of bool
>-- Check size of bool - failed
>-- Check size of int
>-- Check size of int - done
>-- Check size of greg_t
>-- Check size of greg_t - done
>-- Check size of long
>-- Check size of long - done
>-- Check size of long long
>-- Check size of long long - done
>-- Check size of long double
>-- Check size of long double - done
>-- Check size of mode_t
>-- Check size of mode_t - done
>-- Check size of off_t
>-- Check size of off_t - done
>-- Check size of size_t
>-- Check size of size_t - done
>-- Check size of wchar_t
>-- Check size of wchar_t - done
>-- Check size of void*
>-- Check size of void* - done
>-- Check if the system is big endian
>-- Searching 16 bit integer
>-- Check size of unsigned short
>-- Check size of unsigned short - done
>-- Using unsigned short
>-- Check if the system is big endian - little endian
>-- Performing Test HAVE___BUILTIN_BSWAP16
>-- Performing Test HAVE___BUILTIN_BSWAP16 - Success
>-- Performing Test HAVE___BUILTIN_BSWAP32
>-- Performing Test HAVE___BUILTIN_BSWAP32 - Success
>-- Performing Test HAVE___BUILTIN_BSWAP64
>-- Performing Test HAVE___BUILTIN_BSWAP64 - Success
>-- Looking for floatingpoint.h
>-- Looking for floatingpoint.h - not found
>-- Looking for ieeefp.h
>-- Looking for ieeefp.h - not found
>-- Looking for cos
>-- Looking for cos - not found
>-- Looking for cos in m
>-- Looking for cos in m - found
>-- Looking for acosh
>-- Looking for acosh - found
>-- Looking for asinh
>-- Looking for asinh - found
>-- Looking for atanh
>-- Looking for atanh - found
>-- Looking for copysign
>-- Looking for copysign - found
>-- Looking for erf
>-- Looking for erf - found
>-- Looking for erfc
>-- Looking for erfc - found
>-- Looking for hypot
>-- Looking for hypot - found
>-- Looking for isfinite
>-- Looking for isfinite - found
>-- Looking for isinf
>-- Looking for isinf - found
>-- Looking for isnan
>-- Looking for isnan - found
>-- Looking for isnand
>-- Looking for isnand - not found
>-- Looking for isnanf
>-- Looking for isnanf - found
>-- Looking for isnormal
>-- Looking for isnormal - found
>-- Looking for j0
>-- Looking for j0 - found
>-- Looking for j1
>-- Looking for j1 - found
>-- Looking for jn
>-- Looking for jn - found
>-- Looking for lrint
>-- Looking for lrint - found
>-- Looking for llrint
>-- Looking for llrint - found
>-- Looking for log1p
>-- Looking for log1p - found
>-- Looking for log2
>-- Looking for log2 - found
>-- Looking for rint
>-- Looking for rint - found
>-- Looking for sincos
>-- Looking for sincos - found
>-- Looking for y0
>-- Looking for y0 - found
>-- Looking for y1
>-- Looking for y1 - found
>-- Looking for yn
>-- Looking for yn - found
>-- Looking for acosf
>-- Looking for acosf - found
>-- Looking for acoshf
>-- Looking for acoshf - found
>-- Looking for asinf
>-- Looking for asinf - found
>-- Looking for asinhf
>-- Looking for asinhf - found
>-- Looking for atanf
>-- Looking for atanf - found
>-- Looking for atanhf
>-- Looking for atanhf - found
>-- Looking for atan2f
>-- Looking for atan2f - found
>-- Looking for erff
>-- Looking for erff - found
>-- Looking for ceilf
>-- Looking for ceilf - found
>-- Looking for cosf
>-- Looking for cosf - found
>-- Looking for coshf
>-- Looking for coshf - found
>-- Looking for erfcf
>-- Looking for erfcf - found
>-- Looking for expf
>-- Looking for expf - found
>-- Looking for fabsf
>-- Looking for fabsf - found
>-- Looking for floorf
>-- Looking for floorf - found
>-- Looking for fmodf
>-- Looking for fmodf - found
>-- Looking for hypotf
>-- Looking for hypotf - found
>-- Looking for logf
>-- Looking for logf - found
>-- Looking for log2f
>-- Looking for log2f - found
>-- Looking for log10f
>-- Looking for log10f - found
>-- Looking for log1pf
>-- Looking for log1pf - found
>-- Looking for lrintf
>-- Looking for lrintf - found
>-- Looking for llrintf
>-- Looking for llrintf - found
>-- Looking for powf
>-- Looking for powf - found
>-- Looking for rintf
>-- Looking for rintf - found
>-- Looking for sinf
>-- Looking for sinf - found
>-- Looking for sinhf
>-- Looking for sinhf - found
>-- Looking for sqrtf
>-- Looking for sqrtf - found
>-- Looking for tanf
>-- Looking for tanf - found
>-- Looking for tanhf
>-- Looking for tanhf - found
>-- Checking whether system has ANSI C header files
>-- Looking for 4 include files stdlib.h, ..., float.h
>-- Looking for 4 include files stdlib.h, ..., float.h - found
>-- Performing Test memchrExists
>-- Performing Test memchrExists - Success
>-- Performing Test freeExists
>-- Performing Test freeExists - Success
>-- ANSI C header files - found
>-- Found GSHHG: /usr/share/gshhg  
>-- Found DCW: /usr/share/dcw-gmt  
>-- Using CFLAGS = '-std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp '
>-- Found Sphinx: /usr/bin/sphinx-build  
>*  Options:
>*  Found GSHHG database       : /usr/share/gshhg (2.3.7)
>*  Found DCW-GMT database     : /usr/share/dcw-gmt
>*  NetCDF library             : /usr/lib64/libnetcdf.so
>*  NetCDF include dir         : /usr/include
>*  Curl library               : 
>*  Curl include dir           : /usr/include
>*  GDAL library               : /usr/lib64/libgdal.so
>*  GDAL include dir           : /usr/include/gdal
>*  FFTW library               : /usr/lib64/libfftw3f.so
>*  FFTW include dir           : /usr/include
>*  Accelerate Framework       : 
>*  Regex support              : PCRE (/usr/lib64/libpcre.so)
>*  ZLIB library               : 
>*  ZLIB include dir           : /usr/include
>*  LAPACK library             : no
>*  License restriction        : yes
>*  Triangulation method       : Watson
>*  OpenMP support             : enabled
>*  GLIB GTHREAD support       : disabled
>*  PTHREAD support            : enabled
>*  Build mode                 : shared
>*  Build GMT core             : always [libgmt.so]
>*  Build PSL library          : always [libpostscriptlight.so]
>*  Build GMT supplements      : yes [supplements.so]
>*  Build GMT for developers   : yes
>*  Build proto supplements    : none
>*
>*  Locations:
>*  Installing GMT in          : /usr
>*  GMT_DATADIR                : /usr/share/gmt-5.4.4
>*  GMT_DOCDIR                 : /usr/share/doc/gmt-5.4.4
>*  GMT_MANDIR                 : /usr/share/man
>-- <<< Gentoo configuration >>>
>Build type      Gentoo
>Install path    /usr
>Compiler flags:
>C               -std=gnu99 -O2 -pipe -march=native -fno-common
>C++             
>Linker flags:
>Executable      -Wl,-O1 -Wl,--as-needed
>Module          -Wl,-O1 -Wl,--as-needed
>Shared          -Wl,-O1 -Wl,--as-needed
>
>-- Configuring done
>-- Generating done
>CMake Warning (dev):
>  Policy CMP0058 is not set: Ninja requires custom command byproducts to be
>  explicit.  Run "cmake --help-policy CMP0058" for policy details.  Use the
>  cmake_policy command to set the policy and suppress this warning.
>
>  This project specifies custom command DEPENDS on files in the build tree
>  that are not specified as the OUTPUT or BYPRODUCTS of any
>  add_custom_command or add_custom_target:
>
>   doc/rst/latex/GMT_API.pdf
>   doc/rst/latex/GMT_Docs.pdf
>   doc/rst/latex/GMT_Manpages.pdf
>   doc/rst/latex/GMT_Tutorial.pdf
>
>  For compatibility with versions of CMake that did not have the BYPRODUCTS
>  option, CMake is generating phony rules for such files to convince 'ninja'
>  to build.
>
>  Project authors should add the missing BYPRODUCTS or OUTPUT options to the
>  custom commands that produce these files.
>This warning is for project developers.  Use -Wno-dev to suppress it.
>
>-- Build files have been written to: /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build
>>>> Source configured.
>>>> Compiling source in /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 ...
> * Working in BUILD_DIR: "/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build"
>ninja -v -j1 -l0
>[1/202] /usr/bin/x86_64-pc-linux-gnu-gcc  -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -MD -MT src/CMakeFiles/pthreads_example.dir/pthreads_example.c.o -MF src/CMakeFiles/pthreads_example.dir/pthreads_example.c.o.d -o src/CMakeFiles/pthreads_example.dir/pthreads_example.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/pthreads_example.c
>[2/202] : && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp  -Wl,-O1 -Wl,--as-needed -fopenmp    -rdynamic src/CMakeFiles/pthreads_example.dir/pthreads_example.c.o  -o src/pthreads_example   && :
>[3/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DSTANDALONE -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -MD -MT src/CMakeFiles/gshhg_version.dir/gshhg_version.c.o -MF src/CMakeFiles/gshhg_version.dir/gshhg_version.c.o.d -o src/CMakeFiles/gshhg_version.dir/gshhg_version.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gshhg_version.c
>[4/202] : && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp  -Wl,-O1 -Wl,--as-needed -fopenmp    -rdynamic src/CMakeFiles/gshhg_version.dir/gshhg_version.c.o  -o src/gshhg_version  -lnetcdf && :
>[5/202] /usr/bin/x86_64-pc-linux-gnu-gcc  -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -MD -MT src/CMakeFiles/script2verbatim.dir/script2verbatim.c.o -MF src/CMakeFiles/script2verbatim.dir/script2verbatim.c.o.d -o src/CMakeFiles/script2verbatim.dir/script2verbatim.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/script2verbatim.c
>[6/202] : && /usr/bin/x86_64-pc-linux-gnu-gcc -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp  -Wl,-O1 -Wl,--as-needed -fopenmp    -rdynamic src/CMakeFiles/script2verbatim.dir/script2verbatim.c.o  -o src/script2verbatim   && :
>[7/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_colors_h -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[8/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_datums_h -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[9/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_ellipsoids -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[10/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_keywords_h -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[11/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_math_h -D GMT=GMT -D gmt=gmt -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[12/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_grd_math_h -D GMT=GRD -D gmt=grd -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[13/202] cd /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src && /usr/bin/cmake -D GENERATE_COMMAND=gen_gmt_dimensions_h -D CMAKE_MODULE_PATH=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules/ -D GMT_SRC=/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4 -P /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/cmake/modules//GmtGenExtraHeaders.cmake
>[14/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/common_sighandler.c.o -MF src/CMakeFiles/gmtlib.dir/common_sighandler.c.o.d -o src/CMakeFiles/gmtlib.dir/common_sighandler.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_sighandler.c
>[15/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_api.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_api.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_api.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c:179:
>In function strncpy,
>    inlined from api_get_moduleinfo at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c:9599:4,
>    inlined from GMT_Encode_Options at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c:9770:14:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin_strncpy specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c: In function GMT_Encode_Options:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_api.c:9599:4: note: length computed here
> 9599 |    strncpy(module, gmt_module, strlen(gmt_module)); /* Rewrite module name to contain prefix of gmt */
>      |    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>[16/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_bcr.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_bcr.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_bcr.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_bcr.c
>[17/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_calclock.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_calclock.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_calclock.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_calclock.c
>[18/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_cdf.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_cdf.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_cdf.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_cdf.c
>[19/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_compat.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_compat.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_compat.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_compat.c
>[20/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_customio.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_customio.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_customio.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_customio.c
>[21/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_dcw.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_dcw.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_dcw.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dcw.c
>[22/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_error.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_error.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_error.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_error.c
>[23/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_fft.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_fft.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_fft.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_fft.c
>[24/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_grdio.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_grdio.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_grdio.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_grdio.c
>[25/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_io.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_io.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_io.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:170:
>In function strncpy,
>    inlined from gmtio_scanf_float at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:2227:2:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin___strncpy_chk specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c: In function gmtio_scanf_float:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:2224:6: note: length computed here
> 2224 |  j = strlen (s);
>      |      ^~~~~~~~~~
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:170:
>In function strncpy,
>    inlined from gmt_scanf at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:6093:6:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin___strncpy_chk specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c: In function gmt_scanf:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:6085:13: note: length computed here
> 6085 |    callen = strlen (s);
>      |             ^~~~~~~~~~
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:170:
>In function strncpy,
>    inlined from gmt_scanf at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:6091:6:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin___strncpy_chk specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c: In function gmt_scanf:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_io.c:6085:13: note: length computed here
> 6085 |    callen = strlen (s);
>      |             ^~~~~~~~~~
>[26/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_memory.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_memory.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_memory.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_memory.c
>[27/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_nc.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_nc.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_nc.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_nc.c
>[28/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_notposix.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_notposix.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_notposix.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_notposix.c
>[29/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_proj.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_proj.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_proj.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_proj.c
>[30/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_shore.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_shore.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_shore.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_shore.c
>[31/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_sph.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_sph.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_sph.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_sph.c
>[32/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_stat.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_stat.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_stat.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_stat.c
>[33/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_support.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_support.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_support.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_support.c
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_support.c:85:
>In function strncpy,
>    inlined from support_init_custom_symbol at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_support.c:4434:3:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin___strncpy_chk specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_support.c: In function support_init_custom_symbol:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_support.c:4432:11: note: length computed here
> 4432 |  length = strlen (in_name);
>      |           ^~~~~~~~~~~~~~~~
>[34/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_regexp.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_regexp.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_regexp.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_regexp.c
>[35/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_vector.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_vector.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_vector.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_vector.c
>[36/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_parse.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_parse.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_parse.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_parse.c
>[37/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_error_codes.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_error_codes.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_error_codes.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_error_codes.c
>[38/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gshhg_version.c.o -MF src/CMakeFiles/gmtlib.dir/gshhg_version.c.o.d -o src/CMakeFiles/gmtlib.dir/gshhg_version.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gshhg_version.c
>[39/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmtread.c.o -MF src/CMakeFiles/gmtlib.dir/gmtread.c.o.d -o src/CMakeFiles/gmtlib.dir/gmtread.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmtread.c
>[40/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmtwrite.c.o -MF src/CMakeFiles/gmtlib.dir/gmtwrite.c.o.d -o src/CMakeFiles/gmtlib.dir/gmtwrite.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmtwrite.c
>[41/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/common_math.c.o -MF src/CMakeFiles/gmtlib.dir/common_math.c.o.d -o src/CMakeFiles/gmtlib.dir/common_math.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_math.c
>[42/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/common_runpath.c.o -MF src/CMakeFiles/gmtlib.dir/common_runpath.c.o.d -o src/CMakeFiles/gmtlib.dir/common_runpath.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:41:
>In function strncpy,
>    inlined from sharedir_from_runtime_libdir at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:314:13:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin_strncpy specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c: In function sharedir_from_runtime_libdir:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:303:23: note: length computed here
>  303 |  len_runtime_libdir = strlen (runtime_libdir);
>      |                       ^~~~~~~~~~~~~~~~~~~~~~~
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:41:
>In function strncpy,
>    inlined from sharedir_from_runtime_bindir at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:353:13,
>    inlined from gmt_guess_sharedir at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:364:7:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin_strncpy specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c: In function gmt_guess_sharedir:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_runpath.c:342:23: note: length computed here
>  342 |  len_runtime_bindir = strlen (runtime_bindir);
>      |                       ^~~~~~~~~~~~~~~~~~~~~~~
>[43/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/common_string.c.o -MF src/CMakeFiles/gmtlib.dir/common_string.c.o.d -o src/CMakeFiles/gmtlib.dir/common_string.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/common_string.c
>[44/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/compat/qsort.c.o -MF src/CMakeFiles/gmtlib.dir/compat/qsort.c.o.d -o src/CMakeFiles/gmtlib.dir/compat/qsort.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/compat/qsort.c
>[45/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_sharedlibs.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_sharedlibs.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_sharedlibs.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_sharedlibs.c
>[46/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_core_module.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_core_module.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_core_module.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_core_module.c
>[47/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_init.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_init.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_init.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c: In function gmt_remove_dir:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c:13205:2: warning: ignoring return value of chdir, declared with attribute warn_unused_result [-Wunused-result]
>13205 |  chdir (dir);
>      |  ^~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c:13213:2: warning: ignoring return value of chdir, declared with attribute warn_unused_result [-Wunused-result]
>13213 |  chdir ("../");  /* Just get out of current dir so thaat it can be removed */
>      |  ^~~~~~~~~~~~~
>In file included from /usr/include/string.h:495,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_dev.h:104,
>                 from /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c:97:
>In function strncpy,
>    inlined from gmt_parse_symbol_option at /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c:11646:5:
>/usr/include/bits/string_fortified.h:106:10: warning: __builtin___strncpy_chk specified bound depends on the length of the source argument [-Wstringop-overflow=]
>  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
>      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c: In function gmt_parse_symbol_option:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_init.c:11646:24: note: length computed here
>11646 |     strncpy (t, txt_a, strlen(txt_a) - 1); /* Make a copy of what we found minus the unit char */
>      |                        ^~~~~~~~~~~~~
>[48/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/gmtlib.dir/gmt_map.c.o -MF src/CMakeFiles/gmtlib.dir/gmt_map.c.o.d -o src/CMakeFiles/gmtlib.dir/gmt_map.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/gmt_map.c
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>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c: In function pipe_HR_BB:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c:917:3: warning: ignoring return value of write, declared with attribute warn_unused_result [-Wunused-result]
>  917 |   write (H->fd[1], PS->data, PS->n_bytes);
>      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c: In function pipe_ghost:
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c:1090:4: warning: ignoring return value of write, declared with attribute warn_unused_result [-Wunused-result]
> 1090 |    write (H->fd[1], PS->data, PS->n_bytes);
>      |    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c:1143:3: warning: ignoring return value of read, declared with attribute warn_unused_result [-Wunused-result]
> 1143 |   read (fd[0], I->data, (unsigned int)(nCols * nRows * nBands));  /* ... but may overflow */
>      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/psconvert.c:1147:4: warning: ignoring return value of read, declared with attribute warn_unused_result [-Wunused-result]
> 1147 |    read (fd[0], tmp, (unsigned int)(nCols * nBands)); /* Read a row of nCols by nBands bytes of data */
>      |    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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>[196/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/supplib.dir/x2sys/x2sys_solve.c.o -MF src/CMakeFiles/supplib.dir/x2sys/x2sys_solve.c.o.d -o src/CMakeFiles/supplib.dir/x2sys/x2sys_solve.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/x2sys/x2sys_solve.c
>[197/202] /usr/bin/x86_64-pc-linux-gnu-gcc -DLIBRARY_EXPORTS -Isrc -I/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src -I/usr/include/gdal -Isrc/gshhg -Isrc/img -Isrc/meca -Isrc/mgd77 -Isrc/misc -Isrc/potential -Isrc/segy -Isrc/spotter -Isrc/x2sys  -DNDEBUG -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp -fPIC -MD -MT src/CMakeFiles/supplib.dir/x2sys/x2sys_merge.c.o -MF src/CMakeFiles/supplib.dir/x2sys/x2sys_merge.c.o.d -o src/CMakeFiles/supplib.dir/x2sys/x2sys_merge.c.o -c /var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4/src/x2sys/x2sys_merge.c
>[198/202] : && /usr/bin/x86_64-pc-linux-gnu-gcc -fPIC -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp  -Wl,-O1 -Wl,--as-needed -shared  -o src/plugins/supplements.so src/CMakeFiles/supplib.dir/gmt_supplements_module.c.o src/CMakeFiles/supplib.dir/gshhg/gshhg.c.o src/CMakeFiles/supplib.dir/img/img2grd.c.o src/CMakeFiles/supplib.dir/meca/utilmeca.c.o src/CMakeFiles/supplib.dir/meca/sacio.c.o src/CMakeFiles/supplib.dir/meca/psmeca.c.o src/CMakeFiles/supplib.dir/meca/pspolar.c.o src/CMakeFiles/supplib.dir/meca/psvelo.c.o src/CMakeFiles/supplib.dir/meca/pscoupe.c.o src/CMakeFiles/supplib.dir/meca/pssac.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77_functions.c.o src/CMakeFiles/supplib.dir/mgd77/cm4_functions.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77convert.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77header.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77info.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77list.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77magref.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77manage.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77path.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77sniffer.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77track.c.o src/CMakeFiles/supplib.dir/misc/dimfilter.c.o src/CMakeFiles/supplib.dir/potential/okbfuns.c.o src/CMakeFiles/supplib.dir/potential/grdredpol.c.o src/CMakeFiles/supplib.dir/potential/gmtgravmag3d.c.o src/CMakeFiles/supplib.dir/potential/gmtflexure.c.o src/CMakeFiles/supplib.dir/potential/gravfft.c.o src/CMakeFiles/supplib.dir/potential/gpsgridder.c.o src/CMakeFiles/supplib.dir/potential/grdflexure.c.o src/CMakeFiles/supplib.dir/potential/grdgravmag3d.c.o src/CMakeFiles/supplib.dir/potential/grdseamount.c.o src/CMakeFiles/supplib.dir/potential/talwani2d.c.o src/CMakeFiles/supplib.dir/potential/talwani3d.c.o src/CMakeFiles/supplib.dir/segy/segy_io.c.o src/CMakeFiles/supplib.dir/segy/segy2grd.c.o src/CMakeFiles/supplib.dir/segy/pssegy.c.o src/CMakeFiles/supplib.dir/segy/pssegyz.c.o src/CMakeFiles/supplib.dir/spotter/libspotter.c.o src/CMakeFiles/supplib.dir/spotter/backtracker.c.o src/CMakeFiles/supplib.dir/spotter/gmtpmodeler.c.o src/CMakeFiles/supplib.dir/spotter/grdpmodeler.c.o src/CMakeFiles/supplib.dir/spotter/grdrotater.c.o src/CMakeFiles/supplib.dir/spotter/grdspotter.c.o src/CMakeFiles/supplib.dir/spotter/hotspotter.c.o src/CMakeFiles/supplib.dir/spotter/originator.c.o src/CMakeFiles/supplib.dir/spotter/rotconverter.c.o src/CMakeFiles/supplib.dir/spotter/rotsmoother.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_init.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_put.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_get.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_binlist.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_datalist.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_cross.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_list.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_report.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_solve.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_merge.c.o  -Wl,-rpath,/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src:  src/libgmt.so.5.4.4  src/libpostscriptlight.so.5.4.4  -ldl  -lm  -lz  -lnetcdf  -lcurl  -lgdal  -lpcre  -lfftw3f  -ldl  -lm && :
>FAILED: src/plugins/supplements.so 
>: && /usr/bin/x86_64-pc-linux-gnu-gcc -fPIC -std=gnu99 -O2 -pipe -march=native -fno-common -fopenmp  -Wl,-O1 -Wl,--as-needed -shared  -o src/plugins/supplements.so src/CMakeFiles/supplib.dir/gmt_supplements_module.c.o src/CMakeFiles/supplib.dir/gshhg/gshhg.c.o src/CMakeFiles/supplib.dir/img/img2grd.c.o src/CMakeFiles/supplib.dir/meca/utilmeca.c.o src/CMakeFiles/supplib.dir/meca/sacio.c.o src/CMakeFiles/supplib.dir/meca/psmeca.c.o src/CMakeFiles/supplib.dir/meca/pspolar.c.o src/CMakeFiles/supplib.dir/meca/psvelo.c.o src/CMakeFiles/supplib.dir/meca/pscoupe.c.o src/CMakeFiles/supplib.dir/meca/pssac.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77_functions.c.o src/CMakeFiles/supplib.dir/mgd77/cm4_functions.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77convert.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77header.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77info.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77list.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77magref.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77manage.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77path.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77sniffer.c.o src/CMakeFiles/supplib.dir/mgd77/mgd77track.c.o src/CMakeFiles/supplib.dir/misc/dimfilter.c.o src/CMakeFiles/supplib.dir/potential/okbfuns.c.o src/CMakeFiles/supplib.dir/potential/grdredpol.c.o src/CMakeFiles/supplib.dir/potential/gmtgravmag3d.c.o src/CMakeFiles/supplib.dir/potential/gmtflexure.c.o src/CMakeFiles/supplib.dir/potential/gravfft.c.o src/CMakeFiles/supplib.dir/potential/gpsgridder.c.o src/CMakeFiles/supplib.dir/potential/grdflexure.c.o src/CMakeFiles/supplib.dir/potential/grdgravmag3d.c.o src/CMakeFiles/supplib.dir/potential/grdseamount.c.o src/CMakeFiles/supplib.dir/potential/talwani2d.c.o src/CMakeFiles/supplib.dir/potential/talwani3d.c.o src/CMakeFiles/supplib.dir/segy/segy_io.c.o src/CMakeFiles/supplib.dir/segy/segy2grd.c.o src/CMakeFiles/supplib.dir/segy/pssegy.c.o src/CMakeFiles/supplib.dir/segy/pssegyz.c.o src/CMakeFiles/supplib.dir/spotter/libspotter.c.o src/CMakeFiles/supplib.dir/spotter/backtracker.c.o src/CMakeFiles/supplib.dir/spotter/gmtpmodeler.c.o src/CMakeFiles/supplib.dir/spotter/grdpmodeler.c.o src/CMakeFiles/supplib.dir/spotter/grdrotater.c.o src/CMakeFiles/supplib.dir/spotter/grdspotter.c.o src/CMakeFiles/supplib.dir/spotter/hotspotter.c.o src/CMakeFiles/supplib.dir/spotter/originator.c.o src/CMakeFiles/supplib.dir/spotter/rotconverter.c.o src/CMakeFiles/supplib.dir/spotter/rotsmoother.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_init.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_put.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_get.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_binlist.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_datalist.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_cross.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_list.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_report.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_solve.c.o src/CMakeFiles/supplib.dir/x2sys/x2sys_merge.c.o  -Wl,-rpath,/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build/src:  src/libgmt.so.5.4.4  src/libpostscriptlight.so.5.4.4  -ldl  -lm  -lz  -lnetcdf  -lcurl  -lgdal  -lpcre  -lfftw3f  -ldl  -lm && :
>/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: src/CMakeFiles/supplib.dir/potential/gmtgravmag3d.c.o:(.bss+0x8): multiple definition of `okabe_mag_param'; src/CMakeFiles/supplib.dir/potential/okbfuns.c.o:(.bss+0x8): first defined here
>/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: src/CMakeFiles/supplib.dir/potential/gmtgravmag3d.c.o:(.bss+0x0): multiple definition of `okabe_mag_var'; src/CMakeFiles/supplib.dir/potential/okbfuns.c.o:(.bss+0x0): first defined here
>/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: src/CMakeFiles/supplib.dir/potential/grdgravmag3d.c.o:(.bss+0x0): multiple definition of `okabe_mag_var'; src/CMakeFiles/supplib.dir/potential/okbfuns.c.o:(.bss+0x0): first defined here
>/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: src/CMakeFiles/supplib.dir/potential/grdgravmag3d.c.o:(.bss+0x8): multiple definition of `okabe_mag_param'; src/CMakeFiles/supplib.dir/potential/okbfuns.c.o:(.bss+0x8): first defined here
>collect2: error: ld returned 1 exit status
>ninja: build stopped: subcommand failed.
> * ERROR: sci-geosciences/gmt-5.4.4::gentoo failed (compile phase):
> *   ninja -v -j1 -l0 failed
> * 
> * Call stack:
> *     ebuild.sh, line  125:  Called src_compile
> *   environment, line 1983:  Called cmake_src_compile
> *   environment, line  708:  Called cmake_build
> *   environment, line  687:  Called eninja
> *   environment, line 1139:  Called die
> * The specific snippet of code:
> *       "$@" || die "${nonfatal_args[@]}" "${*} failed"
> * 
> * If you need support, post the output of `emerge --info '=sci-geosciences/gmt-5.4.4::gentoo'`,
> * the complete build log and the output of `emerge -pqv '=sci-geosciences/gmt-5.4.4::gentoo'`.
> * The complete build log is located at '/var/log/portage/sci-geosciences:gmt-5.4.4:20200218-051014.log'.
> * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-geosciences/gmt-5.4.4/temp/build.log'.
> * The ebuild environment file is located at '/var/tmp/portage/sci-geosciences/gmt-5.4.4/temp/environment'.
> * Working directory: '/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4_build'
> * S: '/var/tmp/portage/sci-geosciences/gmt-5.4.4/work/gmt-5.4.4'

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